SCIENTIA-FELLOWS II: International Postdoctoral Fellowship Programme

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3rd call: communication link to Euraxess

Information to the Project Officer about the call publication and a screenshot of call announcement

1st call: communication link to Euroaxess

Information to the Project Officer about the call publication and a screenshot of call announcement

2nd call: communication link to Euroaxess

Information to the Project Officer about the call publication and a screenshot of call announcement

Publications

Colorimetric and Electrochemical Screening for Early Detection of Diabetes Mellitus and Diabetic Retinopathy—Application of Sensor Arrays and Machine Learning

Auteurs: Georgina Faura; Gerard Boix-Lemonche; Anne Kristin Holmeide; Rasa Verkauskiene; Vallo Volke; Jelizaveta Sokolovska; Goran Petrovski
Publié dans: Sensors, Numéro Vol 22, Iss 718, p 718, 2022, ISSN 1424-8220
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/s22030718

Divalent ligand-monovalent molecule binding.

Auteurs: Mathijs Janssen; Harald Stenmark; Andreas Carlson
Publié dans: Soft Matter, 2021, ISSN 1744-683X
Éditeur: Royal Society of Chemistry
DOI: 10.1039/d1sm00070e

Genetic Association Between Schizophrenia and Cortical Brain Surface Area and Thickness

Auteurs: Weiqiu Cheng, Oleksandr Frei, Dennis van der Meer, Yunpeng Wang, Kevin S. O’Connell, Yunhan Chu, Shahram Bahrami, Alexey A. Shadrin, Dag Alnæs, Guy F. L. Hindley, Aihua Lin, Naz Karadag, Chun-Chieh Fan, Lars T. Westlye, Tobias Kaufmann, Espen Molden, Anders M. Dale, Srdjan Djurovic, Olav B. Smeland, Ole A. Andreassen
Publié dans: JAMA Psychiatry, Numéro 78/9, 2021, Page(s) 1020, ISSN 2168-622X
Éditeur: American Medical Association
DOI: 10.1001/jamapsychiatry.2021.1435

Intracorneal Implantation of 3D Bioprinted Scaffolds Containing Mesenchymal Stromal Cells Using Femtosecond‐Laser‐Assisted Intrastromal Keratoplasty

Auteurs: Gerard Boix‐Lemonche; Richard M. Nagymihaly; Essi M. Niemi; Natasha Josifovska; Stian Johansen; Morten C. Moe; Hanne Scholz; Goran Petrovski
Publié dans: Macromolecular Bioscience, 2023, ISSN 1616-5195
Éditeur: Wiley-VCH GmbH
DOI: 10.1002/mabi.202200422

The human lens is capable of trilineage differentiation towards osteo-, chondro-, and adipogenesis—a model for studying cataract pathogenesis

Auteurs: Boix-Lemonche, Gerard; Nagymihaly, Richard M.; Lumi, Xhevat; Petrovski, Goran
Publié dans: Frontiers in Bioengineering and Biotechnology, 2023, ISSN 2296-4185
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fbioe.2023.1164795

Determination of CAR T cell metabolism in an optimized protocol

Auteurs: Sandy Joaquina; Christopher Forcados; Benjamin Caulier; Benjamin Caulier; Benjamin Caulier; Else Marit Inderberg; Sébastien Wälchli
Publié dans: Frontiers in Bioengineering and Biotechnology, Vol 11 (2023), Numéro 2, 2023, ISSN 2296-4185
Éditeur: Frontiers Media SA
DOI: 10.3389/fbioe.2023.1207576

Thermoplastic Elastomer (TPE)–Poly(Methyl Methacrylate) (PMMA) Hybrid Devices for Active Pumping PDMS-Free Organ-on-a-Chip Systems

Auteurs: Mathias Busek, Steffen Nøvik, Aleksandra Aizenshtadt, Mikel Amirola-Martinez, Thomas Combriat, Stefan Grünzner, Stefan Krauss
Publié dans: Biosensors, Numéro 11/5, 2021, Page(s) 162, ISSN 2079-6374
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/bios11050162

Pump-less, recirculating organ-on-a-chip (rOoC) platform

Auteurs: M. Busek; A. Aizenshtadt; T. Koch; A. Frank; L. Delon; M. Amirola Martinez; A. Golovin; C. Dumas; J. Stokowiec; S. Gruenzner; E. Melum; S. Krauss
Publié dans: Lab on a Chip, 2023, ISSN 1473-0197
Éditeur: Royal Society of Chemistry
DOI: 10.1039/d2lc00919f

Evolutionary and functional history of the Escherichia coli K1 capsule

Auteurs: Sergio Arredondo-Alonso, George Blundell-Hunter, Zuyi Fu, Rebecca A. Gladstone, Alfred Fillol-Salom, Jessica Loraine, Elaine Cloutman-Green, Pål J. Johnsen, Ørjan Samuelsen, Anna K. Pöntinen, François Cléon, Susana Chavez-Bueno, Miguel A. De la Cruz, Miguel A. Ares, Manivanh Vongsouvath, Agnieszka Chmielarczyk, Carolyne Horner, Nigel Klein, Alan McNally, Joice N. Reis, José R. Penadés, Nich
Publié dans: nature communications, 2023, ISSN 2041-1723
Éditeur: Nature Publishing Group
DOI: 10.1038/s41467-023-39052-w

GAK and PRKCD are positive regulators of PRKN-independent mitophagy

Auteurs: Michael J. Munson, Benan J. Mathai, Matthew Yoke Wui Ng, Laura Trachsel-Moncho, Laura R. de la Ballina, Sebastian W. Schultz, Yahyah Aman, Alf H. Lystad, Sakshi Singh, Sachin Singh, Jørgen Wesche, Evandro F. Fang, Anne Simonsen
Publié dans: Nature Communications, Numéro 12/1, 2021, ISSN 2041-1723
Éditeur: Nature Publishing Group
DOI: 10.1038/s41467-021-26331-7

Estimating the Logarithm of Characteristic Function and Stability Parameter for Symmetric Stable Laws

Auteurs: Jüri Lember; Annika Krutto
Publié dans: Methodology and Computing in Applied Probability, 2021, ISSN 1387-5841
Éditeur: Kluwer Academic Publishers
DOI: 10.1007/s11009-021-09908-z

Pharmacologic Control of CAR T Cells.

Auteurs: Benjamin Caulier; Jorrit M. Enserink; Sébastien Wälchli
Publié dans: International Journal of Molecular Sciences, 2021, ISSN 1422-0067
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms22094320

Robust monolithic solvers for the Stokes-Darcy problem with the Darcy equation in primal form

Auteurs: Wietse M. Boon; Timo Koch; Miroslav Kuchta; Kent-André Mardal
Publié dans: SIAM Journal on Scientific Computing, 2022, ISSN 1064-8275
Éditeur: Society for Industrial and Applied Mathematics
DOI: 10.1137/21m1452974

Mge-cluster: a reference-free approach for typing bacterial plasmids

Auteurs: Sergio Arredondo-Alonso, Rebecca A Gladstone, Anna K Pöntinen, João A Gama, Anita C Schürch, Val F Lanza, Pål Jarle Johnsen, Ørjan Samuelsen, Gerry Tonkin-Hill, Jukka Corander
Publié dans: NAR Genomics and Bioinformatics, 2023, ISSN 2631-9268
Éditeur: Oxford University Press
DOI: 10.1093/nargab/lqad066

Recovering Escherichia coli Plasmids in the Absence of Long-Read Sequencing Data

Auteurs: Julian A. Paganini, Nienke L. Plantinga, Sergio Arredondo-Alonso, Rob J. L. Willems, Anita C. Schürch
Publié dans: Microorganisms, Numéro 9/8, 2021, Page(s) 1613, ISSN 2076-2607
Éditeur: MDPI
DOI: 10.3390/microorganisms9081613

Mixed fatty acid-phospholipid protocell networks.

Auteurs: Inga Põldsalu; Elif Senem Köksal; Irep Gözen
Publié dans: Physical Chemistry Chemical Physics, 2021, ISSN 1463-9076
Éditeur: Royal Society of Chemistry
DOI: 10.1039/d1cp03832j

Lithium increases mitochondrial respiration in iPSC-derived neural precursor cells from lithium responders

Auteurs: Jordi Requena Osete, Ibrahim A. Akkouh, Denis Reis de Assis, Attila Szabo, Evgeniia Frei, Timothy Hughes, Olav B. Smeland, Nils Eiel Steen, Ole A. Andreassen, Srdjan Djurovic
Publié dans: Molecular Psychiatry, 2021, ISSN 1359-4184
Éditeur: Nature Publishing Group
DOI: 10.1038/s41380-021-01164-4

A (Dual) Network Model for Heat Transfer in Porous Media

Auteurs: Timo Koch, Kilian Weishaupt, Johannes Müller, Bernhard Weigand, Rainer Helmig
Publié dans: Transport in Porous Media, Numéro 140/1, 2021, Page(s) 107-141, ISSN 0169-3913
Éditeur: Kluwer Academic Publishers
DOI: 10.1007/s11242-021-01602-5

A high-throughput multiplexing and selection strategy to complete bacterial genomes

Auteurs: Alonso, Sergio Arredondo; Pöntinen, Anna K.; Cleon, Francois Pierre Alexandre; Gladstone, Rebecca Ashley; Schürch, Anita C.; Johnsen, Pål Jarle; Samuelsen, Ørjan; Corander, Jukka
Publié dans: GigaScience, 2021, ISSN 2047-217X
Éditeur: Oxford University Press
DOI: 10.1093/gigascience/giab079

Nonlinear mixed-dimension model for embedded tubular networks with application to root water uptake

Auteurs: Timo Koch; Hanchuan Wu; Martin Schneider
Publié dans: Journal of Computational Physics, 2022, ISSN 0021-9991
Éditeur: Academic Press
DOI: 10.1016/j.jcp.2021.110823

Robust analysis of prokaryotic pangenome gene gain and loss rates with Panstripe

Auteurs: Gerry Tonkin-Hill; Rebecca A Gladstone; Anna K Pöntinen; Sergio Arredondo-Alonso; Stephen D Bentley; Jukka Corander
Publié dans: Genome Research, 2023, ISSN 1088-9051
Éditeur: Cold Spring Harbor Laboratory Press
DOI: 10.1101/gr.277340.122

Mutational analysis and protein profiling predict drug sensitivity in multiple myeloma cell lines

Auteurs: Mariaserena Giliberto; Leonardo Miranda Santana; Toril Holien; Kristine Misund; Sigve Nakken; Daniel Vodak; Eivind Hovig; Leonardo A. Meza-Zepeda; Eivind Coward; Anders Waage; Kjetil Taskén; Sigrid S. Skånland
Publié dans: Frontiers in Oncology, 2022, ISSN 2234-943X
Éditeur: Frontiers Media S. A.
DOI: 10.3389/fonc.2022.1040730

Shared genetic architecture between schizophrenia and subcortical brain volumes implicates early neurodevelopmental processes and brain development in childhood

Auteurs: Cheng, Weiqiu; van der Meer, Dennis; Parker, Nadine; Hindley, Guy Frederick Lanyon; O'Connell, Kevin Sean; Wang, Yunpeng; Shadrin, Alexey; Alnæs, Dag; Bahrami, Shahram; Lin, Aihua; Karadag, Naz; Holen, Børge; Fernández-Cabello, Sara; Fan, Chun-Chieh; Dale, Anders; Djurovic, Srdjan; Westlye, Lars Tjelta; Frei, Oleksandr; Smeland, Olav Bjerkehagen; Andreassen, Ole
Publié dans: molecular psychiatry, 2022, ISSN 1359-4184
Éditeur: Nature Publishing Group
DOI: 10.1038/s41380-022-01751-z

Charting the Landscape of Genetic Overlap Between Mental Disorders and Related Traits Beyond Genetic Correlation

Auteurs: Guy Hindley, Oleksandr Frei, Alexey A Shadrin, Weiqiu Cheng, Kevin S O'Connell, Romain Icick, Nadine Parker, Shahram Bahrami, Naz Karadag, Daniel Roelfs, Børge Holen, Aihua Lin, Chun C Fan, Srdjan Djurovic, Anders M Dale, Olav B Smeland, Ole A Andreassen
Publié dans: American Journal of Psychiatry, 2022, ISSN 0002-953X
Éditeur: American Psychiatric Publishing, Inc.
DOI: 10.1176/appi.ajp.21101051

Reversible heat production during electric double layer buildup depends sensitively on the electrolyte and its reservoir

Auteurs: Fabian Glatzel, Mathijs Janssen, Andreas Härtel
Publié dans: The Journal of Chemical Physics, Numéro 154/6, 2021, Page(s) 064901, ISSN 0021-9606
Éditeur: American Institute of Physics
DOI: 10.1063/5.0037218

Bacterial Toxin-Triggered Release of Antibiotics from Capsosomes Protects a Fly Model from Lethal Methicillin-Resistant Staphylococcus aureus (MRSA) Infection

Auteurs: Renée L. Tonkin, Anna Klöckner, Adrian Najer, Carolina J. Simoes da Silva, Cécile Echalier, Marc S. Dionne, Andrew M. Edwards, Molly M. Stevens
Publié dans: Advanced Healthcare Materials, 2022, ISSN 2192-2659
Éditeur: World Scientific
DOI: 10.1002/adhm.202200036

Seizing the moment: Zebrafish epilepsy models

Auteurs: Kinga Gawel, Melanie Langlois, Teresa Martins, Wietske van der Ent, Ettore Tiraboschi, Maxime Jacmin, Alexander D. Crawford, Camila V. Esguerra
Publié dans: Neuroscience & Biobehavioral Reviews, Numéro 116, 2020, Page(s) 1-20, ISSN 0149-7634
Éditeur: Pergamon Press Ltd.
DOI: 10.1016/j.neubiorev.2020.06.010

Retinal Pigment Epithelium Cell Development: Extrapolating Basic Biology to Stem Cell Research

Auteurs: Santosh Gupta; Lyubomyr Lytvynchuk; Taras Ardan; Hana Studenovska; Georgina Faura; Lars Eide; Ljubo Znaor; Slaven Erceg; Knut Stieger; Jan Motlik; Kapil Bharti; Goran Petrovski
Publié dans: Biomedicines, Vol 11, Iss 2, p 310 (2023), Numéro 1, 2023, ISSN 2227-9059
Éditeur: MDPI
DOI: 10.3390/biomedicines11020310

Spontaneous Formation of Prebiotic Compartment Colonies on Hadean Earth and Pre-Noachian Mars

Auteurs: Köksal, Elif; Põldsalu, Inga; Friis, Henrik; Mojzsis, Stephen J; Bizzarro, Martin; Gözen, Irep
Publié dans: chemsystemschem, 2022, ISSN 2570-4206
Éditeur: Wiley-VCH GmbH
DOI: 10.1002/syst.202200012

Quantitative analysis of neuronal mitochondrial movement reveals patterns resulting from neurotoxicity of rotenone and 6-hydroxydopamine

Auteurs: Rui F. Simões; Rute Pino; Maurício Moreira-Soares; Jaromira Kovarova; Jiri Neuzil; Jiri Neuzil; Rui D. M. Travasso; Paulo J. Oliveira; Teresa Cunha-Oliveira; Francisco B. Pereira
Publié dans: The FASEB Journal, 2021, ISSN 0892-6638
Éditeur: Federation of American Societies for Experimental Biology
DOI: 10.1096/fj.202100899r

Transmission Line Circuit and Equation for an Electrolyte-Filled Pore of Finite Length

Auteurs: Mathijs Janssen
Publié dans: PHYSICAL REVIEW LETTERS, 2021, ISSN 0031-9007
Éditeur: American Physical Society
DOI: 10.1103/physrevlett.126.136002

Apparent nosocomial adaptation of Enterococcus faecalis predates the modern hospital era

Auteurs: Anna K. Pöntinen, Janetta Top, Sergio Arredondo-Alonso, Gerry Tonkin-Hill, Ana R. Freitas, Carla Novais, Rebecca A. Gladstone, Maiju Pesonen, Rodrigo Meneses, Henri Pesonen, John A. Lees, Dorota Jamrozy, Stephen D. Bentley, Val F. Lanza, Carmen Torres, Luisa Peixe, Teresa M. Coque, Julian Parkhill, Anita C. Schürch, Rob J. L. Willems, Jukka Corander
Publié dans: Nature Communications, Numéro 12/1, 2021, ISSN 2041-1723
Éditeur: Nature Publishing Group
DOI: 10.1038/s41467-021-21749-5

Cryo-EM structure of Helicobacter pylori urease with an inhibitor in the active site at 2.0 Å resolution

Auteurs: Eva S. Cunha, Xiaorui Chen, Marta Sanz-Gaitero, Deryck J. Mills, Hartmut Luecke
Publié dans: Nature Communications, Numéro 12/1, 2021, ISSN 2041-1723
Éditeur: Nature Publishing Group
DOI: 10.1038/s41467-020-20485-6

Emergence and dissemination of antimicrobial resistance in Escherichia coli causing bloodstream infections in Norway in 2002–17: a nationwide, longitudinal, microbial population genomic study

Auteurs: Gladstone, Rebecca Ashley; McNally, Alan; Pöntinen, Anna Kaarina; Tonkin-Hill, Gerry; Lees, John A.; Skytén, Kusti Onni; Cléon, Francois Pierre Alexandre; Christensen, Martin Owczarek Korsner; Haldorsen, Bjørg; Bye, Kristina K.; Gammelsrud, Karianne Wiger; Hjetland, Reidar; Kümmel, Angela; Larsen, Hege; Lindemann, Paul Christoffer; Löhr, Iren Høyland; Marvik, Åshild; Nilsen, Einar; Noer, M
Publié dans: The Lancet Microbe, 2021, ISSN 2666-5247
Éditeur: Elsevier Ltd.
DOI: 10.1016/s2666-5247(21)00031-8

Regulatory Network of PD1 Signaling Is Associated with Prognosis in Glioblastoma Multiforme

Auteurs: Camila M. Lopes-Ramos; Tatiana Belova; Tess H. Brunner; Marouen Ben Guebila; Daniel Osorio; John Quackenbush; Marieke L. Kuijjer; Marieke L. Kuijjer
Publié dans: Cancer Research, 2021, ISSN 0008-5472
Éditeur: American Association for Cancer Research
DOI: 10.1158/0008-5472.can-21-0730

Using iPSC Models to Understand the Role of Estrogen in Neuron-Glia Interactions in Schizophrenia and Bipolar Disorder.

Auteurs: Denis Reis de Assis; Attila Szabo; Jordi Requena Osete; Francesca Puppo; Kevin S. O’Connell; Ibrahim A. Akkouh; Timothy P. Hughes; Evgeniia Frei; Ole A. Andreassen; Srdjan Djurovic
Publié dans: 10, Numéro 1, 2021, ISSN 2073-4409
Éditeur: MDPI
DOI: 10.3390/cells10020209

Academic User View: Organ-on-a-Chip Technology

Auteurs: Mathias Busek; Aleksandra Aizenshtadt; Mikel Amirola-Martinez; Ludivine Delon; Stefan Krauss
Publié dans: biosensors, 2022, ISSN 2079-6374
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/bios12020126

Estimates for the astrocyte endfoot sheath permeability of the extra-cellular pathway

Auteurs: Timo Koch; Vegard Vinje; Kent-André Mardal
Publié dans: Fluids and Barriers of the CNS, 2023, ISSN 2045-8118
Éditeur: BioMed Central
DOI: 10.1186/s12987-023-00421-8

Dynamic density functional theory for the charging of electric double layer capacitors

Auteurs: Ma, Ke Janssen, Mathijs Adriaan Lian, Cheng Van Roij, René
Publié dans: Journal of Chemical Physics, 2022, ISSN 0021-9606
Éditeur: American Institute of Physics
DOI: 10.1063/5.0081827

Protocells: Milestones and Recent Advances

Auteurs: Irep Gözen; Elif Senem Köksal; Inga Põldsalu; Lin Xue; Karolina Spustova; Esteban Pedrueza‐Villalmanzo; Ruslan Ryskulov; Fanda Meng; Aldo Jesorka
Publié dans: Small, 2022, ISSN 1613-6829
Éditeur: Wiley-VCH GmbH
DOI: 10.1002/smll.202106624

fieldcompare: A Python package for regression testing simulation results

Auteurs: Dennis Gläser; Timo Koch; Sören Peters; Sven Marcus; Bernd Flemisch
Publié dans: Journal of Open Source Software, 2023, ISSN 2475-9066
Éditeur: Journal of Open Source Software
DOI: 10.21105/joss.04905

SCN1A overexpression, associated with a genomic region marked by a risk variant for a common epilepsy, raises seizure susceptibility

Auteurs: Katri Silvennoinen, Kinga Gawel, Despina Tsortouktzidis, Julika Pitsch, Saud Alhusaini, Karen M. J. van Loo, Richard Picardo, Zuzanna Michalak, Susanna Pagni, Helena Martins Custodio, James Mills, Christopher D. Whelan, Greig I. de Zubicaray, Katie L. McMahon, Wietske van der Ent, Karolina J. Kirstein-Smardzewska, Ettore Tiraboschi, Jonathan M. Mudge, Adam Frankish, Maria Thom, Margaret J. Wright,
Publié dans: Acta Neuropathologica, 2022, ISSN 0001-6322
Éditeur: Springer Verlag
DOI: 10.1007/s00401-022-02429-0

Knockdown of sarcolipin (SLN) impairs substrate utilization in human skeletal muscle cells

Auteurs: Abel M. Mengeste; Parmeshwar Katare; Andrea Dalmao Fernandez; Jenny Lund; Hege G. Bakke; David Baker; Stefano Bartesaghi; Xiao-Rong Peng; Arild C. Rustan; G. Hege Thoresen; Eili Tranheim Kase
Publié dans: Molecular Biology Reports, 2022, ISSN 0301-4851
Éditeur: Kluwer Academic Publishers
DOI: 10.1007/s11033-022-07387-0

Design and clinical application of injectable hydrogels for musculoskeletal therapy

Auteurs: Øystein Øvrebø; Giuseppe Perale; Jonathan P. Wojciechowski; Cécile Echalier; Jonathan R. T. Jeffers; Molly M. Stevens; Håvard J. Haugen; Filippo Rossi
Publié dans: Bioengineering & Translational Medicine, 2022, ISSN 2380-6761
Éditeur: American Institute of Chemical Engineers
DOI: 10.1002/btm2.10295

The cholesterol transport protein GRAMD1C regulates autophagy initiation and mitochondrial bioenergetics

Auteurs: Matthew Yoke Wui Ng, Chara Charsou, Ana Lapao, Sakshi Singh, Laura Trachsel-Moncho, Sebastian W. Schultz, Sigve Nakken, Michael J. Munson & Anne Simonsen
Publié dans: nature communications, 2022, ISSN 2041-1723
Éditeur: Nature Publishing Group
DOI: 10.1038/s41467-022-3

Projection-based resolved interface 1D-3D mixed-dimension method for embedded tubular network systems

Auteurs: Timo Koch
Publié dans: Computers & Mathematics with Applications, 2022, ISSN 0898-1221
Éditeur: Pergamon Press Ltd.
DOI: 10.1016/j.camwa.2022.01.021

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