SCIENTIA-FELLOWS II: International Postdoctoral Fellowship Programme

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Deliverables

3rd call: communication link to Euraxess

Information to the Project Officer about the call publication and a screenshot of call announcement

1st call: communication link to Euroaxess

Information to the Project Officer about the call publication and a screenshot of call announcement

2nd call: communication link to Euroaxess

Information to the Project Officer about the call publication and a screenshot of call announcement

Publications

How CAR T Cells Breathe

Author(s): Christopher Forcados, Sandy Joaquina, Nicholas Paul Casey, Benjamin Caulier, Sébastien Wälchli
Published in: Cells, Issue 11, 2025, Page(s) 1454, ISSN 2073-4409
Publisher: MDPI
DOI: 10.3390/cells11091454

Human cytomegalovirus infection perturbs neural progenitor cell fate via the expression of viral microRNAs

Author(s): Xuan Jiang, Siqing Liu, Ya‐Ru Fu, Xi‐Juan Liu, Xiao‐Jun Li, Bo Yang, Hai‐Fei Jiang, Zhang‐Zhou Shen, Endalkachew Ashenafi Alemu, Pavel Vazquez, Yaping Tang, Mari Kaarbø, Michael A. McVoy, Simon Rayner, Min‐Hua Luo
Published in: Journal of Medical Virology, Issue 95, 2024, ISSN 0146-6615
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/jmv.28574

Colorimetric and Electrochemical Screening for Early Detection of Diabetes Mellitus and Diabetic Retinopathy—Application of Sensor Arrays and Machine Learning

Author(s): Georgina Faura; Gerard Boix-Lemonche; Anne Kristin Holmeide; Rasa Verkauskiene; Vallo Volke; Jelizaveta Sokolovska; Goran Petrovski
Published in: Sensors, Issue Vol 22, Iss 718, p 718, 2022, ISSN 1424-8220
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/s22030718

The ECM and tissue architecture are major determinants of early invasion mediated by E-cadherin dysfunction

Author(s): Soraia Melo, Pilar Guerrero, Maurício Moreira Soares, José Rafael Bordin, Fátima Carneiro, Patrícia Carneiro, Maria Beatriz Dias, João Carvalho, Joana Figueiredo, Raquel Seruca, Rui D. M. Travasso
Published in: Communications Biology, Issue 6, 2023, ISSN 2399-3642
Publisher: Nature Portfolio
DOI: 10.1038/s42003-023-05482-x

Using Polygenic Hazard Scores to Predict Age at Onset of Alzheimer’s Disease in Nordic Populations

Author(s): Ehsan Motazedi, Weiqiu Cheng, Jesper Q. Thomassen, Oleksandr Frei, Arvid Rongve, Lavinia Athanasiu, Shahram Bahrami, Alexey Shadrin, Ingun Ulstein, Eystein Stordal, Anne Brækhus, Ingvild Saltvedt, Sigrid B. Sando, Kevin S. O’Connell, Guy Hindley, Dennis van der Meer, Sverre Bergh, Børge G. Nordestgaard, Anne Tybjærg-Hansen, Geir Bråthen, Lasse Pihlstrøm, Srdjan Djurovic, Ruth Frikke-Schmidt
Published in: Journal of Alzheimer's Disease, Issue 88, 2024, Page(s) 1533-1544, ISSN 1387-2877
Publisher: IOS Press
DOI: 10.3233/jad-220174

Divalent ligand-monovalent molecule binding.

Author(s): Mathijs Janssen; Harald Stenmark; Andreas Carlson
Published in: Soft Matter, 2021, ISSN 1744-683X
Publisher: Royal Society of Chemistry
DOI: 10.1039/d1sm00070e

Predictors of early adulthood insomnia following exposure to a single mass violence attack during adolescence: 7–13 year follow-up from the Utøya and HUNT studies

Author(s): Kate Porcheret, Grete Dyb, Tore Wentzel-Larsen, Synne Øien Stensland
Published in: European Journal of Psychotraumatology, Issue 15, 2024, ISSN 2000-8066
Publisher: Taylor and Francis
DOI: 10.1080/20008066.2024.2312750

Temporal expression and spatial distribution of the proteoglycan versican during cardiac fibrosis development

Author(s): Athiramol Sasi, Andreas Romaine, Pugazendhi Murugan Erusappan, Arne Olav Melleby, Almira Hasic, Christen Peder Dahl, Kaspar Broch, Vibeke Marie Almaas, Rosa Doñate Puertas, H. Llewelyn Roderick, Ida Gjervold Lunde, Ivar Sjaastad, Maria Vistnes, Geir Christensen
Published in: Matrix Biology Plus, Issue 19-20, 2023, Page(s) 100135, ISSN 2590-0285
Publisher: Elsevier
DOI: 10.1016/j.mbplus.2023.100135

Efficient chimeric antigen receptor targeting of a central epitope of CD22

Author(s): Nicholas Paul Casey, Clara Helena Klee, Anne Fåne, Benjamin Caulier, Agnieszka Graczyk-Jarzynka, Marta Krawczyk, Klaudyna Fidyt, Sarah E. Josefsson, Hakan Köksal, Pierre Dillard, Elzbieta Patkowska, Malgorzata Firczuk, Erlend B. Smeland, Magdalena Winiarska, June H. Myklebust, Else Marit Inderberg, Sébastien Wälchli
Published in: Journal of Biological Chemistry, Issue 299, 2023, Page(s) 104883, ISSN 0021-9258
Publisher: American Society for Biochemistry and Molecular Biology Inc.
DOI: 10.1016/j.jbc.2023.104883

Fipronil affects cockroach behavior and olfactory memory

Author(s): Maria Eduarda Rosa, Letícia Campos, Bruna Trindade Borges, Sara Santos, Yuri Correia Barreto, Denis Reis de Assis, Stephen Hyslop, Velci Queiroz de Souza, Lúcia Vinadé, Cháriston André Dal Belo
Published in: Journal of Experimental Biology, Issue 226, 2023, ISSN 0022-0949
Publisher: The Company of Biologists Ltd.
DOI: 10.1242/jeb.245239

Modulation of multidrug-resistant clone success in Escherichia coli populations: a longitudinal, multi-country, genomic and antibiotic usage cohort study

Author(s): Anna K Pöntinen, Rebecca A Gladstone, Henri Pesonen, Maiju Pesonen, François Cléon, Benjamin J Parcell, Teemu Kallonen, Gunnar Skov Simonsen, Nicholas J Croucher, Alan McNally, Julian Parkhill, Pål J Johnsen, Ørjan Samuelsen, Jukka Corander
Published in: The Lancet Microbe, Issue 5, 2024, Page(s) e142-e150, ISSN 2666-5247
Publisher: The Lancet Microbe
DOI: 10.1016/s2666-5247(23)00292-6

Abundant pleiotropy across neuroimaging modalities identified through a multivariate genome-wide association study

Author(s): E. P. Tissink, A. A. Shadrin, D. van der Meer, N. Parker, G. Hindley, D. Roelfs, O. Frei, C. C. Fan, M. Nagel, T. Nærland, M. Budisteanu, S. Djurovic, L. T. Westlye, M. P. van den Heuvel, D. Posthuma, T. Kaufmann, A. M. Dale, O. A. Andreassen
Published in: Nature Communications, Issue 15, 2024, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-024-46817-4

A heavy-tailed model for analyzing miRNA-seq raw read counts

Author(s): Annika Krutto, Therese Haugdahl Nøst, Magne Thoresen
Published in: Statistical Applications in Genetics and Molecular Biology, Issue 23, 2024, ISSN 1544-6115
Publisher: Berkeley Electronic Press
DOI: 10.1515/sagmb-2023-0016

Genetic Association Between Schizophrenia and Cortical Brain Surface Area and Thickness

Author(s): Weiqiu Cheng, Oleksandr Frei, Dennis van der Meer, Yunpeng Wang, Kevin S. O’Connell, Yunhan Chu, Shahram Bahrami, Alexey A. Shadrin, Dag Alnæs, Guy F. L. Hindley, Aihua Lin, Naz Karadag, Chun-Chieh Fan, Lars T. Westlye, Tobias Kaufmann, Espen Molden, Anders M. Dale, Srdjan Djurovic, Olav B. Smeland, Ole A. Andreassen
Published in: JAMA Psychiatry, Issue 78/9, 2021, Page(s) 1020, ISSN 2168-622X
Publisher: American Medical Association
DOI: 10.1001/jamapsychiatry.2021.1435

Genetic Overlap Between Global Cortical Brain Structure, C-Reactive Protein, and White Blood Cell Counts

Author(s): Nadine Parker, Weiqiu Cheng, Guy F.L. Hindley, Kevin S. O’Connell, Sandeep Karthikeyan, Børge Holen, Alexey A. Shadrin, Zillur Rahman, Naz Karadag, Shahram Bahrami, Aihua Lin, Nils Eiel Steen, Thor Ueland, Pål Aukrust, Srdjan Djurovic, Anders M. Dale, Olav B. Smeland, Oleksandr Frei, Ole A. Andreassen
Published in: Biological Psychiatry, Issue 95, 2024, Page(s) 62-71, ISSN 0006-3223
Publisher: Elsevier BV
DOI: 10.1016/j.biopsych.2023.06.008

The cholesterol transport protein GRAMD1C regulates autophagy initiation and mitochondrial bioenergetics

Author(s): Matthew Yoke Wui Ng, Chara Charsou, Ana Lapao, Sakshi Singh, Laura Trachsel-Moncho, Sebastian W. Schultz, Sigve Nakken, Michael J. Munson, Anne Simonsen
Published in: Nature Communications, Issue 13, 2023, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-022-33933-2

Allelic variation of KIR and HLA tunes the cytolytic payload and determines functional hierarchy of NK cell repertoires

Author(s): Camille Philippon, Sudan Tao, Dennis Clement, Alvaro Haroun-Izquierdo, Katherine M. Kichula, Herman Netskar, Ludwig Brandt, Vincent Sheng Oei, Minoru Kanaya, Pilar Maria Lanuza, Marie Schaffer, Jodie P. Goodridge, Amir Horowitz, Faming Zhu, Quirin Hammer, Ebba Sohlberg, Rakesh Kumar Majhi, Lise Kveberg, Björn Önfelt, Paul J. Norman, Karl-Johan Malmberg
Published in: Blood Advances, Issue 7, 2023, Page(s) 4492-4504, ISSN 2473-9529
Publisher: Elsevier
DOI: 10.1182/bloodadvances.2023009827

The population-level impact of Enterococcus faecalis genetics on intestinal colonisation and extraintestinal infection

Author(s): Chrispin Chaguza, Anna K. Pöntinen, Janetta Top, Sergio Arredondo-Alonso, Ana R. Freitas, Carla Novais, Carmen Torres, Stephen D. Bentley, Luisa Peixe, Teresa M. Coque, Rob J.L. Willems, Jukka Corander
Published in: Microbiology Spectrum, 2022, ISSN 2165-0497
Publisher: American Society for Microbiology (AsM)
DOI: 10.1101/2022.09.26.509451

Stability of a biomembrane tube covered with proteins

Author(s): Mathijs Janssen, Susanne Liese, Sami C. Al-Izzi, Andreas Carlson
Published in: Physical Review E, Issue 109, 2024, ISSN 2470-0045
Publisher: American Physical Society
DOI: 10.1103/physreve.109.044403

rPanglaoDB: an R package to download and merge labeled single-cell RNA-seq data from the PanglaoDB database

Author(s): Daniel Osorio, Marieke L Kuijjer, James J Cai
Published in: Bioinformatics, Issue 38, 2023, Page(s) 580-582, ISSN 1367-4803
Publisher: Oxford University Press
DOI: 10.1093/bioinformatics/btab549

Intracorneal Implantation of 3D Bioprinted Scaffolds Containing Mesenchymal Stromal Cells Using Femtosecond‐Laser‐Assisted Intrastromal Keratoplasty

Author(s): Gerard Boix‐Lemonche; Richard M. Nagymihaly; Essi M. Niemi; Natasha Josifovska; Stian Johansen; Morten C. Moe; Hanne Scholz; Goran Petrovski
Published in: Macromolecular Bioscience, 2023, ISSN 1616-5195
Publisher: Wiley-VCH GmbH
DOI: 10.1002/mabi.202200422

Prevalence of insomnia in a general adult population cohort using different diagnostic criteria: The seventh survey of the Tromsø study 2015–2016

Author(s): Kate Porcheret, Laila A. Hopstock, Kristian Bernhard Nilsen
Published in: Sleep Medicine, Issue 119, 2024, Page(s) 289-295, ISSN 1389-9457
Publisher: Elsevier BV
DOI: 10.1016/j.sleep.2024.05.002

CELLULAR, A Cell Autophagy Imaging Dataset

Author(s): Amani Al Outa, Steven Hicks, Vajira Thambawita, Siri Andresen, Jorrit M. Enserink, Pål Halvorsen, Michael A. Riegler, Helene Knævelsrud
Published in: Scientific Data, Issue 10, 2023, ISSN 2052-4463
Publisher: Nature
DOI: 10.1038/s41597-023-02687-x

Insomnia in survivors 8.5 years after the Utøya Island terrorist attack: transition from late adolescence to early adulthood - the Utøya study

Author(s): Kate Porcheret, Synne Øien Stensland, Tore Wentzel-Larsen, Grete Dyb
Published in: European Journal of Psychotraumatology, Issue 13, 2023, ISSN 2000-8066
Publisher: Taylor & Francis
DOI: 10.1080/20008198.2021.2020472

The human lens is capable of trilineage differentiation towards osteo-, chondro-, and adipogenesis—a model for studying cataract pathogenesis

Author(s): Boix-Lemonche, Gerard; Nagymihaly, Richard M.; Lumi, Xhevat; Petrovski, Goran
Published in: Frontiers in Bioengineering and Biotechnology, 2023, ISSN 2296-4185
Publisher: Frontiers Media S.A.
DOI: 10.3389/fbioe.2023.1164795

Pangenome-spanning epistasis and coselection analysis via de Bruijn graphs

Author(s): Juri Kuronen, Samuel T. Horsfield, Anna K. Pöntinen, Sudaraka Mallawaarachchi, Sergio Arredondo-Alonso, Harry Thorpe, Rebecca A. Gladstone, Rob J.L. Willems, Stephen D. Bentley, Nicholas J. Croucher, Johan Pensar, John A. Lees, Gerry Tonkin-Hill, Jukka Corander
Published in: Genome Research, Issue 34, 2024, Page(s) 1081-1088, ISSN 1088-9051
Publisher: Cold Spring Harbor Laboratory Press
DOI: 10.1101/gr.278485.123

Vascular reconstruction of the decellularized biomatrix for whole-organ engineering—a critical perspective and future strategies

Author(s): Santosh Gupta, Akriti Sharma, Goran Petrovski, Rama Shanker Verma
Published in: Frontiers in Bioengineering and Biotechnology, Issue 11, 2023, ISSN 2296-4185
Publisher: Frontier Media S.A.
DOI: 10.3389/fbioe.2023.1221159

Piezo1 activation by stretching of uterine myometrium supports pregnancy and prevents preterm labour

Author(s): Rakesh Kumar Majhi, Shirin Pourteymour
Published in: The Journal of Physiology, Issue 601, 2023, Page(s) 719-721, ISSN 0022-3751
Publisher: Blackwell Publishing Inc.
DOI: 10.1113/jp283810

Determination of CAR T cell metabolism in an optimized protocol

Author(s): Sandy Joaquina; Christopher Forcados; Benjamin Caulier; Benjamin Caulier; Benjamin Caulier; Else Marit Inderberg; Sébastien Wälchli
Published in: Frontiers in Bioengineering and Biotechnology, Vol 11 (2023), Issue 2, 2023, ISSN 2296-4185
Publisher: Frontiers Media SA
DOI: 10.3389/fbioe.2023.1207576

Stable and locally mass- and momentum-conservative control-volume finite-element schemes for the Stokes problem

Author(s): Martin Schneider, Timo Koch
Published in: Computer Methods in Applied Mechanics and Engineering, Issue 420, 2024, Page(s) 116723, ISSN 0045-7825
Publisher: Elsevier BV
DOI: 10.1016/j.cma.2023.116723

CD37 is a safe chimeric antigen receptor target to treat acute myeloid leukemia

Author(s): Benjamin Caulier, Sandy Joaquina, Pascal Gelebart, Tara Helén Dowling, Fatemeh Kaveh, Moritz Thomas, Luka Tandaric, Patrik Wernhoff, Niveditha Umesh Katyayini, Cara Wogsland, May Eriksen Gjerstad, Yngvar Fløisand, Gunnar Kvalheim, Carsten Marr, Sebastian Kobold, Jorrit M. Enserink, Bjørn Tore Gjertsen, Emmet McCormack, Else Marit Inderberg, Sébastien Wälchli
Published in: Cell Reports Medicine, Issue 5, 2024, Page(s) 101572, ISSN 2666-3791
Publisher: Cell Press
DOI: 10.1016/j.xcrm.2024.101572

Thermoplastic Elastomer (TPE)–Poly(Methyl Methacrylate) (PMMA) Hybrid Devices for Active Pumping PDMS-Free Organ-on-a-Chip Systems

Author(s): Mathias Busek, Steffen Nøvik, Aleksandra Aizenshtadt, Mikel Amirola-Martinez, Thomas Combriat, Stefan Grünzner, Stefan Krauss
Published in: Biosensors, Issue 11/5, 2021, Page(s) 162, ISSN 2079-6374
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/bios11050162

Pump-less, recirculating organ-on-a-chip (rOoC) platform

Author(s): M. Busek; A. Aizenshtadt; T. Koch; A. Frank; L. Delon; M. Amirola Martinez; A. Golovin; C. Dumas; J. Stokowiec; S. Gruenzner; E. Melum; S. Krauss
Published in: Lab on a Chip, 2023, ISSN 1473-0197
Publisher: Royal Society of Chemistry
DOI: 10.1039/d2lc00919f

Psychiatric disorders and brain white matter exhibit genetic overlap implicating developmental and neural cell biology

Author(s): Nadine Parker, Weiqiu Cheng, Guy F. L. Hindley, Pravesh Parekh, Alexey A. Shadrin, Ivan I. Maximov, Olav B. Smeland, Srdjan Djurovic, Anders M. Dale, Lars T. Westlye, Oleksandr Frei, Ole A. Andreassen
Published in: Molecular Psychiatry, Issue 28, 2024, Page(s) 4924-4932, ISSN 1359-4184
Publisher: Nature Publishing Group
DOI: 10.1038/s41380-023-02264-z

The relationship between cannabis use, schizophrenia, and bipolar disorder: a genetically informed study

Author(s): Weiqiu Cheng, Nadine Parker, Naz Karadag, Elise Koch, Guy Hindley, Romain Icick, Alexey Shadrin, Kevin S O’Connell, Thomas Bjella, Shahram Bahrami, Zillur Rahman, Markos Tesfaye, Piotr Jaholkowski, Linn Rødevand, Børge Holen, Trine Vik Lagerberg, Nils Eiel Steen, Srdjan Djurovic, Anders M Dale, Oleksandr Frei, Olav B Smeland, Ole A Andreassen
Published in: The Lancet Psychiatry, Issue 10, 2024, Page(s) 441-451, ISSN 2215-0366
Publisher: Elsevier Limited
DOI: 10.1016/s2215-0366(23)00143-8

Transcriptional and functional effects of lithium in bipolar disorder iPSC-derived cortical spheroids

Author(s): Jordi Requena Osete, Ibrahim A. Akkouh, Oleksandr Ievglevskyi, Matthieu Vandenberghe, Denis Reis de Assis, Thor Ueland, Elena Kondratskaya, Børge Holen, Attila Szabo, Timothy Hughes, Olav B. Smeland, Vidar Martin Steen, Ole A. Andreassen, Srdjan Djurovic
Published in: Molecular Psychiatry, Issue 28, 2023, Page(s) 3033-3043, ISSN 1359-4184
Publisher: Nature Publishing Group
DOI: 10.1038/s41380-023-01944-0

Identification of trypsin-degrading commensals in the large intestine

Author(s): Youxian Li, Eiichiro Watanabe, Yusuke Kawashima, Damian R. Plichta, Zhujun Wang, Makoto Ujike, Qi Yan Ang, Runrun Wu, Munehiro Furuichi, Kozue Takeshita, Koji Yoshida, Keita Nishiyama, Sean M. Kearney, Wataru Suda, Masahira Hattori, Satoshi Sasajima, Takahiro Matsunaga, Xiaoxi Zhang, Kazuto Watanabe, Jun Fujishiro, Jason M. Norman, Bernat Olle, Shutoku Matsuyama, Ho Namkoong, Yoshifumi Uwamino, Ma
Published in: Nature, Issue 609, 2022, Page(s) 582-589, ISSN 0028-0836
Publisher: Nature Publishing Group
DOI: 10.1038/s41586-022-05181-3

Detecting co-selection through excess linkage disequilibrium in bacterial genomes

Author(s): Sudaraka Mallawaarachchi, Gerry Tonkin-Hill, Anna K Pöntinen, Jessica K Calland, Rebecca A Gladstone, Sergio Arredondo-Alonso, Neil MacAlasdair, Harry A Thorpe, Janetta Top, Samuel K Sheppard, David Balding, Nicholas J Croucher, Jukka Corander
Published in: NAR Genomics and Bioinformatics, Issue 6, 2024, ISSN 2631-9268
Publisher: Oxford University Press
DOI: 10.1093/nargab/lqae061

A comprehensive <scp>AI</scp>‐driven analysis of large‐scale omic datasets reveals novel dual‐purpose targets for the treatment of cancer and aging

Author(s): Frank W. Pun, Geoffrey Ho Duen Leung, Hoi Wing Leung, Jared Rice, Tomas Schmauck‐Medina, Sofie Lautrup, Xi Long, Bonnie Hei Man Liu, Chun Wai Wong, Ivan V. Ozerov, Alex Aliper, Feng Ren, Ari J. Rosenberg, Nishant Agrawal, Evgeny Izumchenko, Evandro F. Fang, Alex Zhavoronkov
Published in: Aging Cell, Issue 22, 2024, ISSN 1474-9718
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/acel.14017

Deciphering the Retinal Epigenome during Development, Disease and Reprogramming: Advancements, Challenges and Perspectives

Author(s): Cristina Zibetti
Published in: Cells, Issue 11, 2024, Page(s) 806, ISSN 2073-4409
Publisher: MDPI
DOI: 10.3390/cells11050806

V-ATPase controls tumor growth and autophagy in a Drosophila model of gliomagenesis

Author(s): Miriam Formica, Alessandra Maria Storaci, Irene Bertolini, Francesca Carminati, Helene Knævelsrud, Valentina Vaira, Thomas Vaccari
Published in: Autophagy, Issue 17, 2021, Page(s) 4442-4452, ISSN 1554-8627
Publisher: Landes Bioscience
DOI: 10.1080/15548627.2021.1918915

Evolutionary and functional history of the Escherichia coli K1 capsule

Author(s): Sergio Arredondo-Alonso, George Blundell-Hunter, Zuyi Fu, Rebecca A. Gladstone, Alfred Fillol-Salom, Jessica Loraine, Elaine Cloutman-Green, Pål J. Johnsen, Ørjan Samuelsen, Anna K. Pöntinen, François Cléon, Susana Chavez-Bueno, Miguel A. De la Cruz, Miguel A. Ares, Manivanh Vongsouvath, Agnieszka Chmielarczyk, Carolyne Horner, Nigel Klein, Alan McNally, Joice N. Reis, José R. Penadés, Nich
Published in: nature communications, 2023, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-023-39052-w

Estimating the Logarithm of Characteristic Function and Stability Parameter for Symmetric Stable Laws

Author(s): Jüri Lember; Annika Krutto
Published in: Methodology and Computing in Applied Probability, 2021, ISSN 1387-5841
Publisher: Kluwer Academic Publishers
DOI: 10.1007/s11009-021-09908-z

BEACH domain proteins function as cargo-sorting adaptors in secretory and endocytic pathways

Author(s): Serhiy Pankiv, Anette Kathinka Dahl, Aleksander Aas, Rosa Linn Andersen, Andreas Brech, Petter Holland, Sakshi Singh, Christian Bindesbøll, Anne Simonsen
Published in: Journal of Cell Biology, Issue 223, 2024, ISSN 0021-9525
Publisher: Rockefeller University Press
DOI: 10.1083/jcb.202408173

Pharmacologic Control of CAR T Cells.

Author(s): Benjamin Caulier; Jorrit M. Enserink; Sébastien Wälchli
Published in: International Journal of Molecular Sciences, 2021, ISSN 1422-0067
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms22094320

Longitudinal tracking of acute kidney injury reveals injury propagation along the nephron

Author(s): Luca Bordoni, Anders Kristensen, Donato Sardella, Hanne Kidmose, Layla Pohl, Søren Krag, Ina Maria Schiessl
Published in: Nature Communications, 2023, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.21203/rs.3.rs-2487613/v1

Time‐dependent reduction in oxidative capacity among cultured myotubes from spinal cord injured individuals

Author(s): Stanislava Stevanovic, Andrea Dalmao‐Fernandez, Derya Mohamed, Tuula A. Nyman, Emil Kostovski, Per Ole Iversen, Mladen Savikj, Natasa Nikolic, Arild C. Rustan, G. Hege Thoresen, Eili T. Kase
Published in: Acta Physiologica, Issue 240, 2024, ISSN 1748-1708
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/apha.14156

Unraveling the shared genetics of common epilepsies and general cognitive ability

Author(s): Naz Karadag, Espen Hagen, Alexey A. Shadrin, Dennis van der Meer, Kevin S. O'Connell, Zillur Rahman, Gleda Kutrolli, Nadine Parker, Shahram Bahrami, Vera Fominykh, Kjell Heuser, Erik Taubøll, Torill Ueland, Nils Eiel Steen, Srdjan Djurovic, Anders M. Dale, Oleksandr Frei, Ole A. Andreassen, Olav B. Smeland
Published in: Seizure: European Journal of Epilepsy, Issue 122, 2024, Page(s) 105-112, ISSN 1059-1311
Publisher: W. B. Saunders Co., Ltd.
DOI: 10.1016/j.seizure.2024.09.016

The crystal structure of mycothiol disulfide reductase (Mtr) provides mechanistic insight into the specific low-molecular-weight thiol reductase activity of Actinobacteria

Author(s): Javier Gutiérrez-Fernández, Hans-Petter Hersleth, Marta Hammerstad
Published in: Acta Crystallographica Section D Structural Biology, Issue 80, 2025, Page(s) 181-193, ISSN 2059-7983
Publisher: IUCr
DOI: 10.1107/s205979832400113x

Single-Cell Transcriptomic Profiling of Cholangiocyte Organoids Derived from Bile Ducts of Primary Sclerosing Cholangitis Patients

Author(s): Anna Katharina Frank, Brian K. Chung, Miguel Larraz Lopez De Novales, Lise Katrine Engesæter, Henry William Hoyle, Jonas Øgaard, James Heslop, Tom H. Karlsen, Olivia Tysoe, Teresa Brevini, Jan S. Tchorz, Ludovic Vallier, Irina Mohorianu, Fotios Sampaziotis, Espen Melum
Published in: Digestive Diseases and Sciences, Issue 69, 2024, Page(s) 3810-3823, ISSN 0163-2116
Publisher: Kluwer Academic/Plenum Publishers
DOI: 10.1007/s10620-024-08570-y

Population-level comparisons of gene regulatory networks modeled on high-throughput single-cell transcriptomics data

Author(s): Daniel Osorio, Anna Capasso, S. Gail Eckhardt, Uma Giri, Alexander Somma, Todd M. Pitts, Christopher H. Lieu, Wells A. Messersmith, Stacey M. Bagby, Harinder Singh, Jishnu Das, Nidhi Sahni, S. Stephen Yi, Marieke L. Kuijjer
Published in: Nature Computational Science, 2024, ISSN 2662-8457
Publisher: Nature
DOI: 10.1101/2023.01.20.524974

Robust monolithic solvers for the Stokes-Darcy problem with the Darcy equation in primal form

Author(s): Wietse M. Boon; Timo Koch; Miroslav Kuchta; Kent-André Mardal
Published in: SIAM Journal on Scientific Computing, 2022, ISSN 1064-8275
Publisher: Society for Industrial and Applied Mathematics
DOI: 10.1137/21m1452974

Mge-cluster: a reference-free approach for typing bacterial plasmids

Author(s): Sergio Arredondo-Alonso, Rebecca A Gladstone, Anna K Pöntinen, João A Gama, Anita C Schürch, Val F Lanza, Pål Jarle Johnsen, Ørjan Samuelsen, Gerry Tonkin-Hill, Jukka Corander
Published in: NAR Genomics and Bioinformatics, 2023, ISSN 2631-9268
Publisher: Oxford University Press
DOI: 10.1093/nargab/lqad066

<scp>FEMA</scp>: Fast and efficient mixed‐effects algorithm for large sample whole‐brain imaging data

Author(s): Pravesh Parekh, Chun Chieh Fan, Oleksandr Frei, Clare E. Palmer, Diana M. Smith, Carolina Makowski, John R. Iversen, Diliana Pecheva, Dominic Holland, Robert Loughnan, Pierre Nedelec, Wesley K. Thompson, Donald J. Hagler, Ole A. Andreassen, Terry L. Jernigan, Thomas E. Nichols, Anders M. Dale
Published in: Human Brain Mapping, Issue 45, 2024, ISSN 1065-9471
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/hbm.26579

Recovering Escherichia coli Plasmids in the Absence of Long-Read Sequencing Data

Author(s): Julian A. Paganini, Nienke L. Plantinga, Sergio Arredondo-Alonso, Rob J. L. Willems, Anita C. Schürch
Published in: Microorganisms, Issue 9/8, 2021, Page(s) 1613, ISSN 2076-2607
Publisher: MDPI
DOI: 10.3390/microorganisms9081613

Charting the shared genetic architecture of Alzheimer's disease, cognition, and educational attainment, and associations with brain development

Author(s): Piotr Jaholkowski, Shahram Bahrami, Vera Fominykh, Guy F.L. Hindley, Markos Tesfaye, Pravesh Parekh, Nadine Parker, Tahir T. Filiz, Kaja Nordengen, Espen Hagen, Elise Koch, Nora R. Bakken, Evgeniia Frei, Viktoria Birkenæs, Zillur Rahman, Oleksandr Frei, Jan Haavik, Srdjan Djurovic, Anders M. Dale, Olav B. Smeland, Kevin S. O’Connell, Alexey A. Shadrin, Ole A. Andreassen
Published in: Neurobiology of Disease, Issue 203, 2025, Page(s) 106750, ISSN 0969-9961
Publisher: Academic Press
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Collaborative benchmarking of functional-structural root architecture models: Quantitative comparison of simulated root water uptake

Author(s): Andrea Schnepf, Christopher K Black, Valentin Couvreur, Benjamin M Delory, Claude Doussan, Adrien Heymans, Mathieu Javaux, Deepanshu Khare, Axelle Koch, Timo Koch, Christian W Kuppe, Magdalena Landl, Daniel Leitner, Guillaume Lobet, Félicien Meunier, Johannes A Postma, Ernst D Schäfer, Tobias Selzner, Jan Vanderborght, Harry Vereecken
Published in: in silico Plants, Issue 5, 2023, ISSN 2517-5025
Publisher: Oxford University Press
DOI: 10.1093/insilicoplants/diad005

Mixed fatty acid-phospholipid protocell networks.

Author(s): Inga Põldsalu; Elif Senem Köksal; Irep Gözen
Published in: Physical Chemistry Chemical Physics, 2021, ISSN 1463-9076
Publisher: Royal Society of Chemistry
DOI: 10.1039/d1cp03832j

Small molecule inhibitors targeting regulatory T cells for cancer treatment

Author(s): Nuria García‐Díaz, Qian Wei, Kjetil Taskén
Published in: European Journal of Immunology, Issue 54, 2024, ISSN 0014-2980
Publisher: John Wiley & Sons Ltd.
DOI: 10.1002/eji.202350448

Lithium increases mitochondrial respiration in iPSC-derived neural precursor cells from lithium responders

Author(s): Jordi Requena Osete, Ibrahim A. Akkouh, Denis Reis de Assis, Attila Szabo, Evgeniia Frei, Timothy Hughes, Olav B. Smeland, Nils Eiel Steen, Ole A. Andreassen, Srdjan Djurovic
Published in: Molecular Psychiatry, 2021, ISSN 1359-4184
Publisher: Nature Publishing Group
DOI: 10.1038/s41380-021-01164-4

A (Dual) Network Model for Heat Transfer in Porous Media

Author(s): Timo Koch, Kilian Weishaupt, Johannes Müller, Bernhard Weigand, Rainer Helmig
Published in: Transport in Porous Media, Issue 140/1, 2021, Page(s) 107-141, ISSN 0169-3913
Publisher: Kluwer Academic Publishers
DOI: 10.1007/s11242-021-01602-5

Discovery of host-directed modulators of virus infection by probing the SARS-CoV-2–host protein–protein interaction network

Author(s): Vandana Ravindran, Jessica Wagoner, Paschalis Athanasiadis, Andreas B Den Hartigh, Julia M Sidorova, Aleksandr Ianevski, Susan L Fink, Arnoldo Frigessi, Judith White, Stephen J Polyak, Tero Aittokallio
Published in: Briefings in Bioinformatics, Issue 23, 2023, ISSN 1467-5463
Publisher: Oxford University Press
DOI: 10.1093/bib/bbac456

Efficient CAR T cell targeting of the CA125 extracellular repeat domain of MUC16

Author(s): Nicholas P Casey, Katrin Kleinmanns, Christopher Forcados, Pascal F Gelebart, Sandy Joaquina, Martine Lode, Emmanuelle Benard, Fatemeh Kaveh, Benjamin Caulier, Christiane Helgestad Gjerde, Elvira García de Jalón, David J Warren, Kristina Lindemann, Erik Rokkones, Ben Davidson, Marit Renee Myhre, Gunnar Kvalheim, Line Bjørge, Emmet McCormack, Else Marit Inderberg, Sébastien Wälchli
Published in: Journal for ImmunoTherapy of Cancer, Issue 12, 2024, Page(s) e008179, ISSN 2051-1426
Publisher: BMJ Journals
DOI: 10.1136/jitc-2023-008179

A high-throughput multiplexing and selection strategy to complete bacterial genomes

Author(s): Alonso, Sergio Arredondo; Pöntinen, Anna K.; Cleon, Francois Pierre Alexandre; Gladstone, Rebecca Ashley; Schürch, Anita C.; Johnsen, Pål Jarle; Samuelsen, Ørjan; Corander, Jukka
Published in: GigaScience, 2021, ISSN 2047-217X
Publisher: Oxford University Press
DOI: 10.1093/gigascience/giab079

Nonlinear mixed-dimension model for embedded tubular networks with application to root water uptake

Author(s): Timo Koch; Hanchuan Wu; Martin Schneider
Published in: Journal of Computational Physics, 2022, ISSN 0021-9991
Publisher: Academic Press
DOI: 10.1016/j.jcp.2021.110823

Protocol for production of tonic CAR T cells with dasatinib

Author(s): Léa Rosselle, Thibault Leray, Sandy Joaquina, Benjamin Caulier, Emmet McCormack, Pascal Gelebart, Sébastien Wälchli, Else Marit Inderberg
Published in: STAR Protocols, Issue 6, 2025, Page(s) 103529, ISSN 2666-1667
Publisher: Cell Press
DOI: 10.1016/j.xpro.2024.103529

Photoannealing of Microtissues Creates High‐Density Capillary Network Containing Living Matter in a Volumetric‐Independent Manner

Author(s): Maik Schot, Malin Becker, Carlo Alberto Paggi, Francisca Gomes, Timo Koch, Tarek Gensheimer, Castro Johnbosco, Liebert Parreiras Nogueira, Andries van der Meer, Andreas Carlson, Håvard Haugen, Jeroen Leijten
Published in: Advanced Materials, Issue 36, 2024, ISSN 0935-9648
Publisher: United Nations Industrial Developement Organization
DOI: 10.1002/adma.202308949

Improving bioinformatics software quality through teamwork

Author(s): Katalin Ferenc, Ieva Rauluseviciute, Ladislav Hovan, Vipin Kumar, Marieke L Kuijjer, Anthony Mathelier
Published in: Bioinformatics, Issue 40, 2024, ISSN 1367-4811
Publisher: Oxford Academic
DOI: 10.1093/bioinformatics/btae632

PIEZO1 targeting in macrophages boosts phagocytic activity and foam cell apoptosis in atherosclerosis

Author(s): Shirin Pourteymour, Jingxue Fan, Rakesh Kumar Majhi, Shuyuan Guo, Xin Sun, Zhen Huang, Ying Liu, Hanna Winter, Alexandra Bäcklund, Nikolaos-Taxiarchis Skenteris, Ekaterina Chernogubova, Olivera Werngren, Zhaolong Li, Josefin Skogsberg, Yuhuang Li, Ljubica Matic, Ulf Hedin, Lars Maegdefessel, Ewa Ehrenborg, Ye Tian, Hong Jin
Published in: Cellular and Molecular Life Sciences, 2024, ISSN 1420-682X
Publisher: Birkhauser Verlag
DOI: 10.21203/rs.3.rs-4539639/v1

The human leukemic oncogene MLL-AF4 promotes hyperplastic growth of hematopoietic tissues in Drosophila larvae

Author(s): Julie A. Johannessen, Miriam Formica, Aina Louise C. Haukeland, Nora Rojahn Bråthen, Amani Al Outa, Miriam Aarsund, Marc Therrien, Jorrit M. Enserink, Helene Knævelsrud
Published in: iScience, Issue 26, 2024, Page(s) 107726, ISSN 2589-0042
Publisher: Elsevier
DOI: 10.1016/j.isci.2023.107726

Insight Into the Metabolic Adaptations of Electrically Pulse-Stimulated Human Myotubes Using Global Analysis of the Transcriptome and Proteome

Author(s): Abel M. Mengeste, Nataša Nikolić, Andrea Dalmao Fernandez, Yuan Z. Feng, Tuula A. Nyman, Sander Kersten, Fred Haugen, Eili Tranheim Kase, Vigdis Aas, Arild C. Rustan, G. Hege Thoresen
Published in: Frontiers in Physiology, Issue 13, 2022, ISSN 1664-042X
Publisher: Frontiers Research Foundation
DOI: 10.3389/fphys.2022.928195

User-View on Organ-on-a-Chip Technology

Author(s): Mathias Busek, Aleksandra Aizenshtadt, Mikel Amirola Martinez, Ludivine Delon, Stefan Krauss
Published in: Biosensors, 2023, ISSN 2079-6374
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.20944/preprints202202.0032.v1

Robust analysis of prokaryotic pangenome gene gain and loss rates with Panstripe

Author(s): Gerry Tonkin-Hill; Rebecca A Gladstone; Anna K Pöntinen; Sergio Arredondo-Alonso; Stephen D Bentley; Jukka Corander
Published in: Genome Research, 2023, ISSN 1088-9051
Publisher: Cold Spring Harbor Laboratory Press
DOI: 10.1101/gr.277340.122

The Effects of the Coating and Aging of Biodegradable Polylactic Acid Membranes on In Vitro Primary Human Retinal Pigment Epithelium Cells

Author(s): Georgina Faura, Hana Studenovska, David Sekac, Zdenka Ellederova, Goran Petrovski, Lars Eide
Published in: Biomedicines, Issue 12, 2025, Page(s) 966, ISSN 2227-9059
Publisher: MDPI
DOI: 10.3390/biomedicines12050966

Mutational analysis and protein profiling predict drug sensitivity in multiple myeloma cell lines

Author(s): Mariaserena Giliberto; Leonardo Miranda Santana; Toril Holien; Kristine Misund; Sigve Nakken; Daniel Vodak; Eivind Hovig; Leonardo A. Meza-Zepeda; Eivind Coward; Anders Waage; Kjetil Taskén; Sigrid S. Skånland
Published in: Frontiers in Oncology, 2022, ISSN 2234-943X
Publisher: Frontiers Media S. A.
DOI: 10.3389/fonc.2022.1040730

WRN loss accelerates abnormal adipocyte metabolism in Werner syndrome

Author(s): Yuyao Tian, Sofie Lautrup, Patrick Wai Nok Law, Ngoc-Duy Dinh, Evandro Fei Fang, Wai-Yee Chan
Published in: Cell & Bioscience, Issue 14, 2024, ISSN 2045-3701
Publisher: Society of Chinese Bioscientists in America
DOI: 10.1186/s13578-023-01183-4

Shared genetic architecture between schizophrenia and subcortical brain volumes implicates early neurodevelopmental processes and brain development in childhood

Author(s): Cheng, Weiqiu; van der Meer, Dennis; Parker, Nadine; Hindley, Guy Frederick Lanyon; O'Connell, Kevin Sean; Wang, Yunpeng; Shadrin, Alexey; Alnæs, Dag; Bahrami, Shahram; Lin, Aihua; Karadag, Naz; Holen, Børge; Fernández-Cabello, Sara; Fan, Chun-Chieh; Dale, Anders; Djurovic, Srdjan; Westlye, Lars Tjelta; Frei, Oleksandr; Smeland, Olav Bjerkehagen; Andreassen, Ole
Published in: molecular psychiatry, 2022, ISSN 1359-4184
Publisher: Nature Publishing Group
DOI: 10.1038/s41380-022-01751-z

Charting the Landscape of Genetic Overlap Between Mental Disorders and Related Traits Beyond Genetic Correlation

Author(s): Guy Hindley, Oleksandr Frei, Alexey A Shadrin, Weiqiu Cheng, Kevin S O'Connell, Romain Icick, Nadine Parker, Shahram Bahrami, Naz Karadag, Daniel Roelfs, Børge Holen, Aihua Lin, Chun C Fan, Srdjan Djurovic, Anders M Dale, Olav B Smeland, Ole A Andreassen
Published in: American Journal of Psychiatry, 2022, ISSN 0002-953X
Publisher: American Psychiatric Publishing, Inc.
DOI: 10.1176/appi.ajp.21101051

Reversible heat production during electric double layer buildup depends sensitively on the electrolyte and its reservoir

Author(s): Fabian Glatzel, Mathijs Janssen, Andreas Härtel
Published in: The Journal of Chemical Physics, Issue 154/6, 2021, Page(s) 064901, ISSN 0021-9606
Publisher: American Institute of Physics
DOI: 10.1063/5.0037218

Genome-wide Association Analysis of Schizophrenia and Vitamin D Levels Shows Shared Genetic Architecture and Identifies Novel Risk Loci

Author(s): Piotr Jaholkowski, Guy F L Hindley, Alexey A Shadrin, Markos Tesfaye, Shahram Bahrami, Mari Nerhus, Zillur Rahman, Kevin S O’Connell, Børge Holen, Nadine Parker, Weiqiu Cheng, Aihua Lin, Linn Rødevand, Naz Karadag, Oleksandr Frei, Srdjan Djurovic, Anders M Dale, Olav B Smeland, Ole A Andreassen
Published in: Schizophrenia Bulletin, Issue 49, 2023, Page(s) 1654-1664, ISSN 0586-7614
Publisher: Oxford University Press
DOI: 10.1093/schbul/sbad063

Bacterial Toxin-Triggered Release of Antibiotics from Capsosomes Protects a Fly Model from Lethal Methicillin-Resistant Staphylococcus aureus (MRSA) Infection

Author(s): Renée L. Tonkin, Anna Klöckner, Adrian Najer, Carolina J. Simoes da Silva, Cécile Echalier, Marc S. Dionne, Andrew M. Edwards, Molly M. Stevens
Published in: Advanced Healthcare Materials, 2022, ISSN 2192-2659
Publisher: World Scientific
DOI: 10.1002/adhm.202200036

Detecting co-selection through excess linkage disequilibrium in bacterial genomes

Author(s): Sudaraka Mallawaarachchi, Gerry Tonkin-Hill, Anna K. Pöntinen, Jessica K. Calland, Rebecca A. Gladstone, Sergio Arredondo-Alonso, Neil MacAlasdair, Harry A. Thorpe, Janetta Top, Samuel K. Sheppard, David Balding, Nicholas J. Croucher, Jukka Corander
Published in: NAR Genomics and Bioinformatics, 2023, ISSN 2631-9268
Publisher: Oxford Academic Press
DOI: 10.1101/2023.08.04.551407

Modulation of in Vitro SARS-CoV-2 Infection by Stephania tetrandra and Its Alkaloid Constituents

Author(s): Aswad Khadilkar, Zoie L. Bunch, Jessica Wagoner, Vandana Ravindran, Jessica M. Oda, Warren S. Vidar, Trevor N. Clark, Preston K. Manwill, Daniel A. Todd, Sarah A. Barr, Lauren K. Olinger, Susan L. Fink, Wendy K. Strangman, Roger G. Linington, John B. MacMillan, Nadja B. Cech, Stephen J. Polyak
Published in: Journal of Natural Products, Issue 86, 2023, Page(s) 1061-1073, ISSN 0163-3864
Publisher: American Chemical Society
DOI: 10.1021/acs.jnatprod.3c00159

Seizing the moment: Zebrafish epilepsy models

Author(s): Kinga Gawel, Melanie Langlois, Teresa Martins, Wietske van der Ent, Ettore Tiraboschi, Maxime Jacmin, Alexander D. Crawford, Camila V. Esguerra
Published in: Neuroscience & Biobehavioral Reviews, Issue 116, 2020, Page(s) 1-20, ISSN 0149-7634
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.neubiorev.2020.06.010

Crowding-Regulated Binding of Divalent Biomolecules

Author(s): Tomasz Skóra, Mathijs Janssen, Andreas Carlson, Svyatoslav Kondrat
Published in: Physical Review Letters, Issue 130, 2025, ISSN 0031-9007
Publisher: American Physical Society
DOI: 10.1103/physrevlett.130.258401

Omega-3 fatty acids and individual variability in plasma triglyceride response: A mini-review

Author(s): Amanda Rundblad, Viviana Sandoval, Kirsten B. Holven, José M. Ordovás, Stine M. Ulven
Published in: Redox Biology, Issue 63, 2023, Page(s) 102730, ISSN 2213-2317
Publisher: Elsevier BV
DOI: 10.1016/j.redox.2023.102730

Retinal Pigment Epithelium Cell Development: Extrapolating Basic Biology to Stem Cell Research

Author(s): Santosh Gupta; Lyubomyr Lytvynchuk; Taras Ardan; Hana Studenovska; Georgina Faura; Lars Eide; Ljubo Znaor; Slaven Erceg; Knut Stieger; Jan Motlik; Kapil Bharti; Goran Petrovski
Published in: Biomedicines, Vol 11, Iss 2, p 310 (2023), Issue 1, 2023, ISSN 2227-9059
Publisher: MDPI
DOI: 10.3390/biomedicines11020310

The G Protein–Coupled Receptor GPR56 Is an Inhibitory Checkpoint for NK Cell Migration

Author(s): Daniel Palacios, Rakesh Kumar Majhi, Edina K. Szabo, Dennis Clement, Mieszko Lachota, Herman Netskar, Leena Penna, Silje Z. Krokeide, Marianna Vincenti, Lise Kveberg, Karl-Johan Malmberg
Published in: The Journal of Immunology, Issue 213, 2025, Page(s) 1349-1357, ISSN 0022-1767
Publisher: American Association of Immunologists
DOI: 10.4049/jimmunol.2400228

Spontaneous Formation of Prebiotic Compartment Colonies on Hadean Earth and Pre-Noachian Mars

Author(s): Köksal, Elif; Põldsalu, Inga; Friis, Henrik; Mojzsis, Stephen J; Bizzarro, Martin; Gözen, Irep
Published in: chemsystemschem, 2022, ISSN 2570-4206
Publisher: Wiley-VCH GmbH
DOI: 10.1002/syst.202200012

Quantitative analysis of neuronal mitochondrial movement reveals patterns resulting from neurotoxicity of rotenone and 6-hydroxydopamine

Author(s): Rui F. Simões; Rute Pino; Maurício Moreira-Soares; Jaromira Kovarova; Jiri Neuzil; Jiri Neuzil; Rui D. M. Travasso; Paulo J. Oliveira; Teresa Cunha-Oliveira; Francisco B. Pereira
Published in: The FASEB Journal, 2021, ISSN 0892-6638
Publisher: Federation of American Societies for Experimental Biology
DOI: 10.1096/fj.202100899r

WRN promotes bone development and growth by unwinding SHOX-G-quadruplexes via its helicase activity in Werner Syndrome

Author(s): Yuyao Tian, Wuming Wang, Sofie Lautrup, Hui Zhao, Xiang Li, Patrick Wai Nok Law, Ngoc-Duy Dinh, Evandro Fei Fang, Hoi Hung Cheung, Wai-Yee Chan
Published in: Nature Communications, Issue 13, 2022, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-022-33012-6

Transmission Line Circuit and Equation for an Electrolyte-Filled Pore of Finite Length

Author(s): Mathijs Janssen
Published in: PHYSICAL REVIEW LETTERS, 2021, ISSN 0031-9007
Publisher: American Physical Society
DOI: 10.1103/physrevlett.126.136002

Childhood trajectories of emotional and behavioral difficulties are related to polygenic liability for mood and anxiety disorders

Author(s): Nora R. Bakken, Nadine Parker, Laurie J. Hannigan, Espen Hagen, Pravesh Parekh, Alexey Shadrin, Piotr Jaholkowski, Evgeniia Frei, Viktoria Birkenæs, Guy Hindley, Laura Hegemann, Elizabeth C. Corfield, Martin Tesli, Alexandra Havdahl, Ole A. Andreassen
Published in: Journal of Child Psychology and Psychiatry, 2024, ISSN 0021-9630
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/jcpp.14063

Contrast-enhanced Micro-CT 3D visualization of cell distribution in hydrated human cornea

Author(s): Gerard Boix-Lemonche, Torben Hildebrand, Håvard Jostein Haugen, Goran Petrovski, Liebert Parreiras Nogueira
Published in: Heliyon, Issue 10, 2024, Page(s) e25828, ISSN 2405-8440
Publisher: Elsevier
DOI: 10.1016/j.heliyon.2024.e25828

Characterizing the polygenic overlap and shared loci between rheumatoid arthritis and cardiovascular diseases

Author(s): Xiaohui Sun, Yu Qian, Weiqiu Cheng, Ding Ye, Bin Liu, Dan Zhou, Chengping Wen, Ole A. Andreassen, Yingying Mao
Published in: BMC Medicine, Issue 22, 2024, ISSN 1741-7015
Publisher: BioMed Central
DOI: 10.1186/s12916-024-03376-1

Apparent nosocomial adaptation of Enterococcus faecalis predates the modern hospital era

Author(s): Anna K. Pöntinen, Janetta Top, Sergio Arredondo-Alonso, Gerry Tonkin-Hill, Ana R. Freitas, Carla Novais, Rebecca A. Gladstone, Maiju Pesonen, Rodrigo Meneses, Henri Pesonen, John A. Lees, Dorota Jamrozy, Stephen D. Bentley, Val F. Lanza, Carmen Torres, Luisa Peixe, Teresa M. Coque, Julian Parkhill, Anita C. Schürch, Rob J. L. Willems, Jukka Corander
Published in: Nature Communications, Issue 12/1, 2021, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-021-21749-5

Identification of novel genomic loci for anxiety symptoms and extensive genetic overlap with psychiatric disorders

Author(s): Markos Tesfaye, Piotr Jaholkowski, Alexey A. Shadrin, Dennis van der Meer, Guy F.L. Hindley, Børge Holen, Nadine Parker, Pravesh Parekh, Viktoria Birkenæs, Zillur Rahman, Shahram Bahrami, Gleda Kutrolli, Oleksandr Frei, Srdjan Djurovic, Anders M. Dale, Olav B. Smeland, Kevin S. O'Connell, Ole A. Andreassen
Published in: Psychiatry and Clinical Neurosciences, Issue 78, 2024, Page(s) 783-791, ISSN 1323-1316
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/pcn.13742

Cryo-EM structure of Helicobacter pylori urease with an inhibitor in the active site at 2.0 Å resolution

Author(s): Eva S. Cunha, Xiaorui Chen, Marta Sanz-Gaitero, Deryck J. Mills, Hartmut Luecke
Published in: Nature Communications, Issue 12/1, 2021, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-020-20485-6

GridFormat: header-only C++-library for grid fileI/O

Author(s): Dennis Gläser, Timo Koch, Bernd Flemisch
Published in: Journal of Open Source Software, Issue 8, 2023, Page(s) 5778, ISSN 2475-9066
Publisher: Journal of Open Source Software
DOI: 10.21105/joss.05778

Pump‐Less, Recirculating Organ‐on‐Chip (rOoC) Platform to Model the Metabolic Crosstalk between Islets and Liver

Author(s): Aleksandra Aizenshtadt, Chencheng Wang, Shadab Abadpour, Pedro Duarte Menezes, Ingrid Wilhelmsen, Andrea Dalmao‐Fernandez, Justyna Stokowiec, Alexey Golovin, Mads Johnsen, Thomas M. D. Combriat, Hanne Røberg‐Larsen, Nikolaj Gadegaard, Hanne Scholz, Mathias Busek, Stefan J. K. Krauss
Published in: Advanced Healthcare Materials, Issue 13, 2024, ISSN 2192-2640
Publisher: John Wiley and Sons Ltd
DOI: 10.1002/adhm.202303785

Targeting shelterin proteins for cancer therapy

Author(s): Wioletta Brankiewicz-Kopcinska, Anoop Kallingal, Radoslaw Krzemieniecki, Maciej Baginski
Published in: Drug Discovery Today, Issue 29, 2024, Page(s) 104056, ISSN 1359-6446
Publisher: Elsevier BV
DOI: 10.1016/j.drudis.2024.104056

Energy metabolism in skeletal muscle cells from donors with different body mass index

Author(s): Parmeshwar B. Katare, Andrea Dalmao-Fernandez, Abel M. Mengeste, Håvard Hamarsland, Stian Ellefsen, Hege G. Bakke, Eili Tranheim Kase, G. Hege Thoresen, Arild C. Rustan
Published in: Frontiers in Physiology, Issue 13, 2022, ISSN 1664-042X
Publisher: Frontiers Research Foundation
DOI: 10.3389/fphys.2022.982842

Emergence and dissemination of antimicrobial resistance in Escherichia coli causing bloodstream infections in Norway in 2002–17: a nationwide, longitudinal, microbial population genomic study

Author(s): Gladstone, Rebecca Ashley; McNally, Alan; Pöntinen, Anna Kaarina; Tonkin-Hill, Gerry; Lees, John A.; Skytén, Kusti Onni; Cléon, Francois Pierre Alexandre; Christensen, Martin Owczarek Korsner; Haldorsen, Bjørg; Bye, Kristina K.; Gammelsrud, Karianne Wiger; Hjetland, Reidar; Kümmel, Angela; Larsen, Hege; Lindemann, Paul Christoffer; Löhr, Iren Høyland; Marvik, Åshild; Nilsen, Einar; Noer, M
Published in: The Lancet Microbe, 2021, ISSN 2666-5247
Publisher: Elsevier Ltd.
DOI: 10.1016/s2666-5247(21)00031-8

The population-level impact of Enterococcus faecalis genetics on intestinal colonization and extraintestinal infection

Author(s): Chrispin Chaguza, Anna K. Pöntinen, Janetta Top, Sergio Arredondo-Alonso, Ana R. Freitas, Carla Novais, Carmen Torres, Stephen D. Bentley, Luisa Peixe, Teresa M. Coque, Rob J. L. Willems, Jukka Corander
Published in: Microbiology Spectrum, Issue 11, 2023, ISSN 2165-0497
Publisher: American Society for Microbiology
DOI: 10.1128/spectrum.00201-23

Regulatory Network of PD1 Signaling Is Associated with Prognosis in Glioblastoma Multiforme

Author(s): Camila M. Lopes-Ramos; Tatiana Belova; Tess H. Brunner; Marouen Ben Guebila; Daniel Osorio; John Quackenbush; Marieke L. Kuijjer; Marieke L. Kuijjer
Published in: Cancer Research, 2021, ISSN 0008-5472
Publisher: American Association for Cancer Research
DOI: 10.1158/0008-5472.can-21-0730

Roles of NAD+in Health and Aging

Author(s): Sofie Lautrup, Yujun Hou, Evandro F. Fang, Vilhelm A. Bohr
Published in: Cold Spring Harbor Perspectives in Medicine, Issue 14, 2024, Page(s) a041193, ISSN 2157-1422
Publisher: Cold Spring Harbor Press
DOI: 10.1101/cshperspect.a041193

Multivariate genetic analysis of personality and cognitive traits reveals abundant pleiotropy

Author(s): Guy Hindley, Alexey A. Shadrin, Dennis van der Meer, Nadine Parker, Weiqiu Cheng, Kevin S. O’Connell, Shahram Bahrami, Aihua Lin, Naz Karadag, Børge Holen, Thomas Bjella, Ian J. Deary, Gail Davies, W. David Hill, Jan Bressler, Sudha Seshadri, Chun Chieh Fan, Torill Ueland, Srdjan Djurovic, Olav B. Smeland, Oleksandr Frei, Anders M. Dale, Ole A. Andreassen
Published in: Nature Human Behaviour, Issue 7, 2023, Page(s) 1584-1600, ISSN 2397-3374
Publisher: Nature Portfolio
DOI: 10.1038/s41562-023-01630-9

Mice lacking intestinal Nr1i2 have normal intestinal homeostasis under steady‐state conditions and are not hypersensitive to inflammation under lipopolysaccharide treatment

Author(s): Salah Edden Amini, Sophie Emilie Bresson, Jérôme Ruzzin
Published in: The FASEB Journal, Issue 37, 2024, ISSN 0892-6638
Publisher: Federation of American Societies for Experimental Biology
DOI: 10.1096/fj.202301126

Using iPSC Models to Understand the Role of Estrogen in Neuron-Glia Interactions in Schizophrenia and Bipolar Disorder.

Author(s): Denis Reis de Assis; Attila Szabo; Jordi Requena Osete; Francesca Puppo; Kevin S. O’Connell; Ibrahim A. Akkouh; Timothy P. Hughes; Evgeniia Frei; Ole A. Andreassen; Srdjan Djurovic
Published in: 10, Issue 1, 2021, ISSN 2073-4409
Publisher: MDPI
DOI: 10.3390/cells10020209

Academic User View: Organ-on-a-Chip Technology

Author(s): Mathias Busek; Aleksandra Aizenshtadt; Mikel Amirola-Martinez; Ludivine Delon; Stefan Krauss
Published in: biosensors, 2022, ISSN 2079-6374
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/bios12020126

Distinct biological signature and modifiable risk factors underlie the comorbidity between major depressive disorder and cardiovascular disease

Author(s): Jacob Bergstedt, Joëlle A. Pasman, Ziyan Ma, Arvid Harder, Shuyang Yao, Nadine Parker, Jorien L. Treur, Dirk J. A. Smit, Oleksandr Frei, Alexey A. Shadrin, Joeri J. Meijsen, Qing Shen, Sara Hägg, Per Tornvall, Alfonso Buil, Thomas Werge, Jens Hjerling-Leffler, Thomas D. Als, Anders D. Børglum, Cathryn M. Lewis, Andrew M. McIntosh, Unnur A. Valdimarsdóttir, Ole A. Andreassen, Patrick F. Sulliva
Published in: Nature Cardiovascular Research, Issue 3, 2024, Page(s) 754-769, ISSN 2731-0590
Publisher: Nature
DOI: 10.1038/s44161-024-00488-y

Applying valency-based immuno-selection to generate broadly cross-reactive antibodies against influenza hemagglutinins

Author(s): Daniëla Maria Hinke, Ane Marie Anderson, Kirankumar Katta, Marlene Fyrstenberg Laursen, Demo Yemane Tesfaye, Ina Charlotta Werninghaus, Davide Angeletti, Gunnveig Grødeland, Bjarne Bogen, Ranveig Braathen
Published in: Nature Communications, Issue 15, 2024, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-024-44889-w

Perinatal exposure to potential endocrine disrupting chemicals and autism spectrum disorder: From Norwegian birth cohort to zebrafish studies

Author(s): Anteneh Assefa Desalegn, Wietske van der Ent, Virissa Lenters, Nina Iszatt, Hein Stigum, Jan Ludvig Lyche, Vidar Berg, Karolina J. Kirstein-Smardzewska, Camila Vicencio Esguerra, Merete Eggesbø
Published in: Environment International, Issue 181, 2023, Page(s) 108271, ISSN 0160-4120
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.envint.2023.108271

Krill oil supplementation in vivo promotes increased fuel metabolism and protein synthesis in cultured human skeletal muscle cells

Author(s): Parmeshwar B. Katare, Andrea Dalmao-Fernandez, Abel M. Mengeste, Farnaz Navabakbar, Håvard Hamarsland, Stian Ellefsen, Rolf K. Berge, Hege G. Bakke, Tuula Anneli Nyman, Eili Tranheim Kase, Arild C. Rustan, G. Hege Thoresen
Published in: Frontiers in Nutrition, Issue 11, 2024, ISSN 2296-861X
Publisher: Frontiers Media
DOI: 10.3389/fnut.2024.1452768

Making sustainable healthcare decisions: three turns towards sustainable guidelines

Author(s): Sietse Wieringa, Hugh McGuire, Qi Wang, Philip van der Wees, Beth Shaw
Published in: BMJ Evidence-Based Medicine, Issue 29, 2024, Page(s) 219-222, ISSN 2515-446X
Publisher: BMJ
DOI: 10.1136/bmjebm-2023-112352

Estimates for the astrocyte endfoot sheath permeability of the extra-cellular pathway

Author(s): Timo Koch; Vegard Vinje; Kent-André Mardal
Published in: Fluids and Barriers of the CNS, 2023, ISSN 2045-8118
Publisher: BioMed Central
DOI: 10.1186/s12987-023-00421-8

Cross-trait genome-wide association analysis of C-reactive protein level and psychiatric disorders

Author(s): Guy Hindley, Ole Kristian Drange, Aihua Lin, Gleda Kutrolli, Alexey A. Shadrin, Nadine Parker, Kevin S. O’Connell, Linn Rødevand, Weiqiu Cheng, Shahram Bahrami, Naz Karadag, Børge Holen, Piotr Jaholkowski, Markos Tesfaye Woldeyohannes, Srdjan Djurovic, Anders M. Dale, Oleksandr Frei, Thor Ueland, Olav B. Smeland, Ole A. Andreassen
Published in: Psychoneuroendocrinology, Issue 157, 2024, Page(s) 106368, ISSN 0306-4530
Publisher: Pergamon Press
DOI: 10.1016/j.psyneuen.2023.106368

Dynamic density functional theory for the charging of electric double layer capacitors

Author(s): Ma, Ke Janssen, Mathijs Adriaan Lian, Cheng Van Roij, René
Published in: Journal of Chemical Physics, 2022, ISSN 0021-9606
Publisher: American Institute of Physics
DOI: 10.1063/5.0081827

Improved functional mapping of complex trait heritability with GSA-MiXeR implicates biologically specific gene sets

Author(s): Oleksandr Frei, Guy Hindley, Alexey A. Shadrin, Dennis van der Meer, Bayram C. Akdeniz, Espen Hagen, Weiqiu Cheng, Kevin S. O’Connell, Shahram Bahrami, Nadine Parker, Olav B. Smeland, Dominic Holland, null null, Christiaan de Leeuw, Danielle Posthuma, Ole A. Andreassen, Anders M. Dale
Published in: Nature Genetics, Issue 56, 2024, Page(s) 1310-1318, ISSN 1061-4036
Publisher: Nature Publishing Group
DOI: 10.1038/s41588-024-01771-1

Protocells: Milestones and Recent Advances

Author(s): Irep Gözen; Elif Senem Köksal; Inga Põldsalu; Lin Xue; Karolina Spustova; Esteban Pedrueza‐Villalmanzo; Ruslan Ryskulov; Fanda Meng; Aldo Jesorka
Published in: Small, 2022, ISSN 1613-6829
Publisher: Wiley-VCH GmbH
DOI: 10.1002/smll.202106624

fieldcompare: A Python package for regression testing simulation results

Author(s): Dennis Gläser; Timo Koch; Sören Peters; Sven Marcus; Bernd Flemisch
Published in: Journal of Open Source Software, 2023, ISSN 2475-9066
Publisher: Journal of Open Source Software
DOI: 10.21105/joss.04905

NLRP3 inflammasome mediates astroglial dysregulation of innate and adaptive immune responses in schizophrenia

Author(s): Attila Szabo, Ibrahim Akkouh, Jordi Requena Osete, Denis Reis de Assis, Elena Kondratskaya, Timothy Hughes, Thor Ueland, Ole A. Andreassen, Srdjan Djurovic
Published in: Brain, Behavior, and Immunity, Issue 124, 2025, Page(s) 144-156, ISSN 0889-1591
Publisher: Academic Press
DOI: 10.1016/j.bbi.2024.11.030

SCN1A overexpression, associated with a genomic region marked by a risk variant for a common epilepsy, raises seizure susceptibility

Author(s): Katri Silvennoinen, Kinga Gawel, Despina Tsortouktzidis, Julika Pitsch, Saud Alhusaini, Karen M. J. van Loo, Richard Picardo, Zuzanna Michalak, Susanna Pagni, Helena Martins Custodio, James Mills, Christopher D. Whelan, Greig I. de Zubicaray, Katie L. McMahon, Wietske van der Ent, Karolina J. Kirstein-Smardzewska, Ettore Tiraboschi, Jonathan M. Mudge, Adam Frankish, Maria Thom, Margaret J. Wright,
Published in: Acta Neuropathologica, 2022, ISSN 0001-6322
Publisher: Springer Verlag
DOI: 10.1007/s00401-022-02429-0

Linking sarcopenia, brain structure and cognitive performance: a large-scale UK Biobank study

Author(s): Tiril P Gurholt, Miguel Germán Borda, Nadine Parker, Vera Fominykh, Rikka Kjelkenes, Jennifer Linge, Dennis van der Meer, Ida E Sønderby, Gustavo Duque, Lars T Westlye, Dag Aarsland, Ole A Andreassen
Published in: Brain Communications, Issue 6, 2024, ISSN 2632-1297
Publisher: Oxford Academic
DOI: 10.1093/braincomms/fcae083

Deletion of aquaporin‐4 improves capillary blood flow distribution in brain edema

Author(s): Luca Bordoni, Anna E. Thoren, Eugenio Gutiérrez‐Jiménez, Knut S. Åbjørsbråten, Daniel M. Bjørnstad, Wannan Tang, Mette Stern, Leif Østergaard, Erlend A. Nagelhus, Sebastian Frische, Ole P. Ottersen, Rune Enger
Published in: Glia, Issue 71, 2023, Page(s) 2559-2572, ISSN 0894-1491
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/glia.24439

Knockdown of sarcolipin (SLN) impairs substrate utilization in human skeletal muscle cells

Author(s): Abel M. Mengeste; Parmeshwar Katare; Andrea Dalmao Fernandez; Jenny Lund; Hege G. Bakke; David Baker; Stefano Bartesaghi; Xiao-Rong Peng; Arild C. Rustan; G. Hege Thoresen; Eili Tranheim Kase
Published in: Molecular Biology Reports, 2022, ISSN 0301-4851
Publisher: Kluwer Academic Publishers
DOI: 10.1007/s11033-022-07387-0

Design and clinical application of injectable hydrogels for musculoskeletal therapy

Author(s): Øystein Øvrebø; Giuseppe Perale; Jonathan P. Wojciechowski; Cécile Echalier; Jonathan R. T. Jeffers; Molly M. Stevens; Håvard J. Haugen; Filippo Rossi
Published in: Bioengineering & Translational Medicine, 2022, ISSN 2380-6761
Publisher: American Institute of Chemical Engineers
DOI: 10.1002/btm2.10295

TrajPy: empowering feature engineering for trajectory analysis across domains

Author(s): Maurício Moreira-Soares, Eduardo Mossmann, Rui D M Travasso, José Rafael Bordin
Published in: Bioinformatics Advances, Issue 4, 2024, ISSN 2635-0041
Publisher: Oxford University Press
DOI: 10.1093/bioadv/vbae026

The Lysosomal Calcium Channel TRPML1 Maintains Mitochondrial Fitness in NK Cells through Interorganelle Cross-Talk

Author(s): Dennis Clement, Edina K. Szabo, Silje Zandstra Krokeide, Merete Thune Wiiger, Marianna Vincenti, Daniel Palacios, Young-Tae Chang, Christian Grimm, Sandip Patel, Harald Stenmark, Andreas Brech, Rakesh Kumar Majhi, Karl-Johan Malmberg
Published in: The Journal of Immunology, Issue 211, 2025, Page(s) 1348-1358, ISSN 0022-1767
Publisher: American Association of Immunologists
DOI: 10.4049/jimmunol.2300406

Exploring the gut DNA virome in fecal immunochemical test stool samples reveals associations with lifestyle in a large population-based study

Author(s): Paula Istvan, Einar Birkeland, Ekaterina Avershina, Ane S. Kværner, Vahid Bemanian, Barbara Pardini, Sonia Tarallo, Willem M. de Vos, Torbjørn Rognes, Paula Berstad, Trine B. Rounge
Published in: Nature Communications, Issue 15, 2024, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-024-46033-0

The cholesterol transport protein GRAMD1C regulates autophagy initiation and mitochondrial bioenergetics

Author(s): Matthew Yoke Wui Ng, Chara Charsou, Ana Lapao, Sakshi Singh, Laura Trachsel-Moncho, Sebastian W. Schultz, Sigve Nakken, Michael J. Munson & Anne Simonsen
Published in: nature communications, 2022, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-022-3

Projection-based resolved interface 1D-3D mixed-dimension method for embedded tubular network systems

Author(s): Timo Koch
Published in: Computers & Mathematics with Applications, 2022, ISSN 0898-1221
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.camwa.2022.01.021

PlasmidEC and gplas2: an optimized short-read approach to predict and reconstruct antibiotic resistance plasmids in Escherichia coli

Author(s): Julian A. Paganini, Jesse J. Kerkvliet, Lisa Vader, Nienke L. Plantinga, Rodrigo Meneses, Jukka Corander, Rob J. L. Willems, Sergio Arredondo-Alonso, Anita C. Schürch
Published in: Microbial Genomics, Issue 10, 2024, ISSN 2057-5858
Publisher: Microbiology Society
DOI: 10.1099/mgen.0.001193

Mitochondrial Role on Cellular Apoptosis, Autophagy, and Senescence during Osteoarthritis Pathogenesis

Author(s): Andrea Dalmao-Fernández, Tamara Hermida-Gómez, Uxia Nogueira-Recalde, Ignacio Rego-Pérez, Francisco J. Blanco-Garcia, Mercedes Fernández-Moreno
Published in: Cells, Issue 13, 2025, Page(s) 976, ISSN 2073-4409
Publisher: MDPI
DOI: 10.3390/cells13110976

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