Unified computational solutions to disentangle biological interactions in multi-omics data

Información del proyecto

FindingPheno

Identificador del acuerdo de subvención: 952914

DOI 10.3030/952914

Fecha de la firma de la CE 2 Diciembre 2020

Fecha de inicio 1 Marzo 2021

Fecha de finalización 28 Febrero 2025

Financiado con arreglo a

• INDUSTRIAL LEADERSHIP - Leadership in enabling and industrial technologies – Biotechnology

Coste total € 5 793 085,00

Aportación de la UE € 5 793 085,00

Coordinado por

KOBENHAVNS UNIVERSITET
Denmark

Resultado final

Documents, reports (8)

Analysis of host-microbiome dynamics in gut microenvironment
Second Report on dissemination, training and networking activities in FindingPheno

Report on dissemination, training and networking activities in FindingPheno

Report on dissemination, training and networking activities in FindingPheno

Report on dissemination training and networking activities in FindingPheno

Plenary kick-off meeting, including minutes

Plenary kickoff meeting including minutes

PDER agreed (updated annually or when needed)

PDER agreed updated annually or when needed

Summary on challenges in curating public data to apply FindingPheno's solutions

Summary on challenges in curating public data to apply FindingPheno’s solutions

Knowledge resources for chicken, salmon and maize

Knowledge resources for chicken salmon and maize

Stakeholder Synergy Meeting

Websites, patent fillings, videos etc. (2)

Visual identity and project website for FindingPheno released
Dynamic model for multi-omic host-microbiome interactions

Publicaciones

Peer reviewed articles (5)

A strategic model of a host–microbe–microbe system reveals the importance of a joint host–microbe immune response to combat stress-induced gut dysbiosis

Autores: István Scheuring, Jacob A, Rasmussen, Davide Bozzi, Morten T Limborg
Publicado en: Frontiers in Microbiology, Edición 1664302X, 2022, ISSN 1664-302X
Editor: Frontiers Media
DOI: 10.3389/fmicb.2022.912806

The Evolution of Microbial Facilitation: Sociogenesis, Symbiogenesis, and Transition in Individuality

Autores: István Zachár, Gergely Boza
Publicado en: Frontiers in Ecology and Evolution, Edición 2296701X, 2022, ISSN 2296-701X
Editor: Frontiers Media
DOI: 10.3389/fevo.2022.798045

Dealing with dimensionality: the application of machine learning to multi-omics data

Autores: Dylan Feldner-Busztin ,Panos Firbas Nisantzis,Shelley Jane Edmunds ,Gergely Boza ,Fernando Racimo,Shyam Gopalakrishnan,Morten Tønsberg Limborg,Leo Lahti,Gonzalo G. de Polavieja
Publicado en: Bioinformatics, Edición Volume 39, Edición 2, February 2023, 2023, ISSN 1367-4811
Editor: Oxford Press
DOI: 10.1093/bioinformatics/btad021

Quantifying the impact of ecological memory on the dynamics of interacting communities

Autores: Moein Khalighi; Didier Gonze; Karoline Faust; Guilhem Sommeria-Klein; Leo Lahti
Publicado en: PLOS Computational Biology, Edición 1553734X, 2022, Página(s) e1009396, ISSN 1553-734X
Editor: Public Library of Science
DOI: 10.1371/journal.pcbi.1009396

Eco-evolutionary modelling of microbial syntrophy indicates the robustness of cross-feeding over cross-facilitation

Autores: Gergely Boza, György Barabás, István Scheuring, István Zachar
Publicado en: Scientific Reports, Edición 2022 January 17. Volume 13, 2022, Página(s) 1-15, ISSN 2045-2322
Editor: Nature Publishing Group
DOI: 10.1038/s41598-023-27421-w