Unified computational solutions to disentangle biological interactions in multi-omics data

Leistungen

Analysis of host-microbiome dynamics in gut microenvironment
Second Report on dissemination, training and networking activities in FindingPheno

Report on dissemination, training and networking activities in FindingPheno

Report on dissemination training and networking activities in FindingPheno

Plenary kick-off meeting, including minutes

Plenary kickoff meeting including minutes

PDER agreed (updated annually or when needed)

PDER agreed updated annually or when needed

Summary on challenges in curating public data to apply FindingPheno's solutions

Summary on challenges in curating public data to apply FindingPheno’s solutions

Knowledge resources for chicken, salmon and maize

Knowledge resources for chicken salmon and maize

Stakeholder Synergy Meeting

Visual identity and project website for FindingPheno released
Dynamic model for multi-omic host-microbiome interactions

Veröffentlichungen

A strategic model of a host–microbe–microbe system reveals the importance of a joint host–microbe immune response to combat stress-induced gut dysbiosis

Autoren: István Scheuring, Jacob A, Rasmussen, Davide Bozzi, Morten T Limborg
Veröffentlicht in: Frontiers in Microbiology, Ausgabe 1664302X, 2022, ISSN 1664-302X
Herausgeber: Frontiers Media
DOI: 10.3389/fmicb.2022.912806

The Evolution of Microbial Facilitation: Sociogenesis, Symbiogenesis, and Transition in Individuality

Autoren: István Zachár, Gergely Boza
Veröffentlicht in: Frontiers in Ecology and Evolution, Ausgabe 2296701X, 2022, ISSN 2296-701X
Herausgeber: Frontiers Media
DOI: 10.3389/fevo.2022.798045

Dealing with dimensionality: the application of machine learning to multi-omics data

Autoren: Dylan Feldner-Busztin ,Panos Firbas Nisantzis,Shelley Jane Edmunds ,Gergely Boza ,Fernando Racimo,Shyam Gopalakrishnan,Morten Tønsberg Limborg,Leo Lahti,Gonzalo G. de Polavieja
Veröffentlicht in: Bioinformatics, Ausgabe Volume 39, Ausgabe 2, February 2023, 2023, ISSN 1367-4811
Herausgeber: Oxford Press
DOI: 10.1093/bioinformatics/btad021

Quantifying the impact of ecological memory on the dynamics of interacting communities

Autoren: Moein Khalighi; Didier Gonze; Karoline Faust; Guilhem Sommeria-Klein; Leo Lahti
Veröffentlicht in: PLOS Computational Biology, Ausgabe 1553734X, 2022, Seite(n) e1009396, ISSN 1553-734X
Herausgeber: Public Library of Science
DOI: 10.1371/journal.pcbi.1009396

Eco-evolutionary modelling of microbial syntrophy indicates the robustness of cross-feeding over cross-facilitation

Autoren: Gergely Boza, György Barabás, István Scheuring, István Zachar
Veröffentlicht in: Scientific Reports, Ausgabe 2022 January 17. Volume 13, 2022, Seite(n) 1-15, ISSN 2045-2322
Herausgeber: Nature Publishing Group
DOI: 10.1038/s41598-023-27421-w

Leistungen

Veröffentlichungen

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