Function and Evolution of Attack and Response Strategies during Allelopathy in Plants

Project Information

FEAR-SAP

Grant agreement ID: 716823

DOI 10.3030/716823

Project closed

EC signature date 2 June 2017

Start date 1 January 2018

End date 30 June 2024

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost € 1 500 000,00

EU contribution € 1 500 000,00

Coordinated by

LUDWIG-MAXIMILIANS-UNIVERSITAET MUENCHEN
Germany

Publications

Peer reviewed articles (9)

Transposon dynamics in the emerging oilseed crop Thlaspi arvense

Author(s): Adrián Contreras-Garrido, Dario Galanti, Andrea Movilli, Claude Becker, Oliver Bossdorf, Hajk-Georg Drost, Detlef Weigel
Published in: PLOS Genetics, Issue 20, 2024, Page(s) e1011141, ISSN 1553-7404
Publisher: PLoS
DOI: 10.1371/journal.pgen.1011141

ARADEEPOPSIS, an Automated Workflow for Top-View Plant Phenomics using Semantic Segmentation of Leaf States

Author(s): Patrick Huether, Niklas Schandry, Katharina Jandrasits, Ilja Bezrukov, Claude Becker
Published in: The Plant Cell, Issue 32, 2020, Page(s) 3674-3688, ISSN 1532-298X
Publisher: Oxford University Press
DOI: 10.1105/tpc.20.00318

Genetic and environmental drivers of large-scale epigenetic variation in Thlaspi arvense

Author(s): Dario Galanti; Daniela Ramos-Cruz; Adam Nunn; Isaac Rodríguez-Arévalo; J.F. Scheepens; Claude Becker; Oliver Bossdorf
Published in: PLoS Genetics, Issue 2, 2022, ISSN 1553-7404
Publisher: PLOS
DOI: 10.1371/journal.pgen.1010452

The lactonase BxdA mediates metabolic specialisation of maize root bacteria to benzoxazinoids

Author(s): Lisa Thoenen, Marco Kreuzer, Christine Pestalozzi, Matilde Florean, Pierre Mateo, Tobias Züst, Anlun Wei, Caitlin Giroud, Liza Rouyer, Valentin Gfeller, Matheus D. Notter, Eva Knoch, Siegfried Hapfelmeier, Claude Becker, Niklas Schandry, Christelle A. M. Robert, Tobias G. Köllner, Rémy Bruggmann, Matthias Erb, Klaus Schlaeppi
Published in: Nature Communications, Issue 15, 2024, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-024-49643-w

Chromosome-level Thlaspi arvense genome provides new tools for translational research and for a newly domesticated cash cover crop of the cooler climates

Author(s): Adam Nunn, Isaac Rodríguez-Arévalo, Zenith Tandukar, Katherine Frels, Adrián Contreras-Garrido, Pablo Carbonell-Bejerano, Panpan Zhang, Daniela Ramos Cruz, Katharina Jandrasits, Christa Lanz, Anthony Brusa, Marie Mirouze, Kevin Dorn, David W Galbraith, Brice A. Jarvis, John C. Sedbrook, Donald L. Wyse, Christian Otto, David Langenberger, Peter F. Stadler, Detlef Weigel, M. David Marks, James A.
Published in: Plant Biotechnology Journal, 2022, ISSN 1467-7652
Publisher: John Wiley & Sons Ltd
DOI: 10.1111/pbi.13775

The role of plant epigenetics in biotic interactions

Author(s): Conchita Alonso, Daniela Ramos-Cruz, Claude Becker
Published in: New Phytologist, Issue 221/2, 2019, Page(s) 731-737, ISSN 0028-646X
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/nph.15408

Allelopathic Plants: Models for Studying Plant–Interkingdom Interactions

Author(s): Niklas Schandry, Claude Becker
Published in: Trends in Plant Science, Issue 25/2, 2020, Page(s) 176-185, ISSN 1360-1385
Publisher: Elsevier BV
DOI: 10.1016/j.tplants.2019.11.004

Transcriptional response of a target plant to benzoxazinoid and diterpene allelochemicals highlights commonalities in detoxification

Author(s): Eva Knoch; Judit Kovács; Sebastian Deiber; Keisuke Tomita; Reshi Shanmuganathan; Núria Serra Serra; Kazunori Okada; Claude Becker; Niklas Schandry
Published in: BMC Plant Biology, Issue 2, 2022, ISSN 1471-2229
Publisher: BioMed Central
DOI: 10.1186/s12870-022-03780-w

MethylScore, a pipeline for accurate and context-aware identification of differentially methylated regions from population-scale plant whole-genome bisulfite sequencing data

Author(s): Patrick Hüther; Jörg Hagmann; Adam Nunn; Ioanna Kakoulidou; Rahul Pisupati; David Langenberger; Detlef Weigel; Frank Johannes; Sebastian J. Schultheiss; Claude Becker
Published in: Quantitative Plant Biology, Issue 3, 2022, ISSN 2632-8828
Publisher: Cambridge University Press
DOI: 10.1017/qpb.2022.14

Other (4)

Plant-derived benzoxazinoids act as antibiotics and shape bacterial communities

Author(s): Niklas Schandry, Katharaina Jandrasits, Ruben Garrido-Oter Claude Becker
Published in: bioRxiv, 2019
Publisher: Cold Spring Harbor Laboratory Press
DOI: 10.1101/2021.01.12.425818

aradeepopsis: From images to phenotypic traits using deep transfer learning

Author(s): Patrick Hüther, Niklas Schandry, Katharina Jandrasits, Ilja Bezrukov, Claude Becker
Published in: bioRxiv, 2020
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/2020.04.01.018192

MethylScore, a pipeline for accurate and context-aware identification of differentially methylated regions from population-scale plant WGBS data

Author(s): Patrick Hüther, Jörg Hagmann, Adam Nunn, Ioanna Kakoulidou, Rahul Pisupati, David Langenberger, Detlef Weigel, Frank Johannes, Sebastian J. Schultheiss, Claude Becker
Published in: bioRxiv, 2022
Publisher: Cold Spring Harbor Laboratory Press
DOI: 10.1101/2022.01.06.475031

Transcriptional response of a target plant to benzoxazinoid and diterpene allelochemicals highlights commonalities in detoxification

Author(s): Eva Knoch, Judit Kovács, Sebastian Deiber, Reshi Shanmuganathan, Núria Serra Serra, Claude Becker, Niklas Schandry
Published in: bioRxiv, 2022
Publisher: Cold Spring Harbor Laboratory Press
DOI: 10.1101/2022.02.21.480921