Complex Oscillatory Systems: Modeling and Analysis

Deliverables

School1, Workshop1

School 1 and workshop 1

Software toolbox

Different software packages are unified an a toolbox package

Workshop3

Workshop 3 performed

Announcements

Announcement on ESR positions published

Workshop2

Workshop 2 performed

School2

School 2

Final conference

Final conference performed

WEB page

Web page launched

Supervisory Board

Supervisory board of the network

Publications

Noise-driven neuromorphic tuned amplifier

Author(s): Duccio Fanelli, Francesco Ginelli, Roberto Livi, Niccoló Zagli, Clement Zankoc
Published in: Physical Review E, Issue 96/6, 2017, ISSN 2470-0045
Publisher: APS
DOI: 10.1103/physreve.96.062313

Firing rate equations require a spike synchrony mechanism to correctly describe fast oscillations in inhibitory networks

Author(s): Federico Devalle, Alex Roxin, Ernest Montbrió
Published in: PLOS Computational Biology, Issue 13/12, 2017, Page(s) e1005881, ISSN 1553-7358
Publisher: International Society for Computational Biology
DOI: 10.1371/journal.pcbi.1005881

Which spike train distance is most suitable for distinguishing rate and temporal coding?

Author(s): Eero Satuvuori, Thomas Kreuz
Published in: Journal of Neuroscience Methods, 2018, ISSN 0165-0270
Publisher: Elsevier BV
DOI: 10.1016/j.jneumeth.2018.02.009

Stabilization of dynamics of oscillatory systems by nonautonomous perturbation

Author(s): Maxime Lucas, Julian Newman, Aneta Stefanovska
Published in: Physical Review E, Issue 97/4, 2018, ISSN 2470-0045
Publisher: American Physical Society
DOI: 10.1103/physreve.97.042209

Desynchronization induced by time-varying network

Author(s): Maxime Lucas, Duccio Fanelli, Timoteo Carletti, Julien Petit
Published in: EPL (Europhysics Letters), Issue 121/5, 2018, Page(s) 50008, ISSN 0295-5075
Publisher: EDP Sciences
DOI: 10.1209/0295-5075/121/50008

Disentangling respiratory sinus arrhythmia in heart rate variability records

Author(s): Çağdaş Topçu, Matthias Frühwirth, Maximilian Moser, Michael Rosenblum, Arkady Pikovsky
Published in: Physiological Measurement, Issue 39/5, 2018, Page(s) 054002, ISSN 1361-6579
Publisher: IOP
DOI: 10.1088/1361-6579/aabea4

Scale-freeness or partial synchronization in neural mass phase oscillator networks: Pick one of two?

Author(s): Andreas Daffertshofer, Robert Ton, Bastian Pietras, Morten L. Kringelbach, Gustavo Deco
Published in: NeuroImage, Issue 180, part B, 2018, ISSN 1053-8119
Publisher: Academic Press
DOI: 10.1016/j.neuroimage.2018.03.070

Analytical approach to network inference: Investigating degree distribution

Author(s): Gloria Cecchini, Björn Schelter
Published in: Physical Review E, Issue 98/2, 2018, Page(s) 022311, ISSN 2470-0045
Publisher: American Physical Society
DOI: 10.1103/physreve.98.022311

Surrogate data for hypothesis testing of physical systems

Author(s): Gemma Lancaster, Dmytro Iatsenko, Aleksandra Pidde, Valentina Ticcinelli, Aneta Stefanovska
Published in: Physics Reports, Issue 748, 2018, Page(s) 1-60, ISSN 0370-1573
Publisher: Elsevier BV
DOI: 10.1016/j.physrep.2018.06.001

Inferring the phase response curve from observation of a continuously perturbed oscillator

Author(s): Rok Cestnik, Michael Rosenblum
Published in: Scientific Reports, Issue 8/1, 2018, Page(s) 13606, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-018-32069-y

Using spike train distances to identify the most discriminative neuronal subpopulation

Author(s): Eero Satuvuori, Mario Mulansky, Andreas Daffertshofer, Thomas Kreuz
Published in: Journal of Neuroscience Methods, 2018, ISSN 0165-0270
Publisher: Elsevier BV
DOI: 10.1016/j.jneumeth.2018.09.008

Evidence of a Critical Phase Transition in Purely Temporal Dynamics with Long-Delayed Feedback

Author(s): Marco Faggian, Francesco Ginelli, Francesco Marino, Giovanni Giacomelli
Published in: Physical Review Letters, Issue 120/17, 2018, ISSN 0031-9007
Publisher: American Physical Society
DOI: 10.1103/physrevlett.120.173901

Dynamics of a large system of spiking neurons with synaptic delay

Author(s): Federico Devalle, Ernest Montbrió, Diego Pazó
Published in: Physical Review E, Issue 98/4, 2018, Page(s) 042214, ISSN 2470-0045
Publisher: american physical society
DOI: 10.1103/physreve.98.042214

Pattern invariance for reaction-diffusion systems on complex networks

Author(s): Giulia Cencetti, Pau Clusella, Duccio Fanelli
Published in: Scientific Reports, Issue 8/1, 2018, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-018-34372-0

Nonautonomous driving induces stability in network of identical oscillators

Author(s): Maxime Lucas, Duccio Fanelli, and Aneta Stefanovska
Published in: Physical Review E, Issue 99/12, 2019, ISSN 2470-0045
Publisher: American Physical Society
DOI: 10.1103/PhysRevE.99.012309

Desynchronization and pattern formation in a noisy feed-forward oscillator network

Author(s): Clément Zankoc, Duccio Fanelli, Francesco Ginelli, Roberto Livi
Published in: Physical Review E, Issue 99/1, 2019, ISSN 2470-0045
Publisher: American Physical Society
DOI: 10.1103/physreve.99.012303

First-order phase transitions in the Kuramoto model with compact bimodal frequency distributions

Author(s): Bastian Pietras, Nicolás Deschle, Andreas Daffertshofer
Published in: Physical Review E, Issue 98/6, 2018, ISSN 2470-0045
Publisher: American Physical Society
DOI: 10.1103/physreve.98.062219

Inferring directed networks using a rank-based connectivity measure

Author(s): Marc G. Leguia, Cristina G. B. Martínez, Irene Malvestio, Adrià Tauste Campo, Rodrigo Rocamora, Zoran Levnajić, Ralph G. Andrzejak
Published in: Physical Review E, Issue 99/1, 2019, ISSN 2470-0045
Publisher: American Physical Society
DOI: 10.1103/physreve.99.012319

A minimal model of self-consistent partial synchrony

Author(s): Pau Clusella, Antonio Politi and Michael Rosenblum
Published in: New Journal of Physics, Issue 18, 2016, ISSN 1367-2630
Publisher: Institute of Physics Publishing
DOI: 10.1088/1367-2630/18/9/093037

Immunization and Targeted Destruction of Networks using Explosive Percolation

Author(s): Pau Clusella, Peter Grassberger, Francisco J. Pérez-Reche, and Antonio Politi
Published in: Physical Review Letters, Issue 117, 2016, Page(s) 208301, ISSN 0031-9007
Publisher: American Physical Society
DOI: 10.1103/PhysRevLett.117.208301

Ott-Antonsen attractiveness for parameter-dependent oscillatory networks

Author(s): Bastian Pietras, Andreas Daffertshofer
Published in: Chaos, Issue 26, 2016, Page(s) 103101, ISSN 1054-1500
Publisher: American Institute of Physics
DOI: 10.1063/1.4963371

Equivalence of coupled networks and networks with multimodal frequency distributions: Conditions for the bimodal and trimodal case

Author(s): Bastian Pietras, Nicolás Deschle, and Andreas Daffertshofer
Published in: Physical Review E, Issue 94, 2016, Page(s) 052211, ISSN 1539-3755
Publisher: American Physical Society
DOI: 10.1103/PhysRevE.94.052211

Synchronization in time-varying random networks with vanishing connectivity

Author(s): Marco Faggian, Francesco Ginelli, Fernando Rosas, Zoran Levnajić
Published in: Scientific Reports, Issue 9/1, 2019, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-019-46345-y

Between phase and amplitude oscillators

Author(s): Pau Clusella, Antonio Politi
Published in: Physical Review E, Issue 99/6, 2019, ISSN 2470-0045
Publisher: APS
DOI: 10.1103/physreve.99.062201

Network dynamics of coupled oscillators and phase reduction techniques

Author(s): Bastian Pietras, Andreas Daffertshofer
Published in: Physics Reports, Issue 819, 2019, ISSN 0370-1573
Publisher: Elsevier BV
DOI: 10.1016/j.physrep.2019.06.001

Reconstructing dynamical networks via feature ranking

Author(s): Marc G. Leguia, Zoran Levnajić, Ljupčo Todorovski, Bernard Ženko
Published in: Chaos: An Interdisciplinary Journal of Nonlinear Science, Issue 29/9, 2019, Page(s) 093107, ISSN 1054-1500
Publisher: American Institute of Physics
DOI: 10.1063/1.5092170

Exact firing rate model reveals the differential effects of chemical versus electrical synapses in spiking networks

Author(s): Bastian Pietras, Federico Devalle, Alex Roxin, Andreas Daffertshofer, Ernest Montbrió
Published in: Physical Review E, Issue 100/4, 2019, ISSN 2470-0045
Publisher: APS
DOI: 10.1103/physreve.100.042412

Leaders and followers: quantifying consistency in spatio-temporal propagation patterns

Author(s): Thomas Kreuz, Eero Satuvuori, Martin Pofahl, Mario Mulansky
Published in: New Journal of Physics, Issue 19/4, 2017, Page(s) 043028, ISSN 1367-2630
Publisher: Institute of Physics Publishing
DOI: 10.1088/1367-2630/aa68c3

Generalized synchronization between chimera states

Author(s): Ralph G. Andrzejak, Giulia Ruzzene, Irene Malvestio
Published in: Chaos: An Interdisciplinary Journal of Nonlinear Science, Issue 27/5, 2017, Page(s) 053114, ISSN 1054-1500
Publisher: American Institute of Physics
DOI: 10.1063/1.4983841

Measures of spike train synchrony for data with multiple time scales

Author(s): Eero Satuvuori, Mario Mulansky, Nebojsa Bozanic, Irene Malvestio, Fleur Zeldenrust, Kerstin Lenk, Thomas Kreuz
Published in: Journal of Neuroscience Methods, Issue 287, 2017, Page(s) 25-38, ISSN 0165-0270
Publisher: Elsevier BV
DOI: 10.1016/j.jneumeth.2017.05.028

Noise-induced stabilization of collective dynamics

Author(s): Pau Clusella, Antonio Politi
Published in: Physical Review E, Issue 95/6, 2017, Page(s) 062221, ISSN 2470-0045
Publisher: American Physical Society
DOI: 10.1103/PhysRevE.95.062221

Reconstructing networks of pulse-coupled oscillators from spike trains

Author(s): Rok Cestnik, Michael Rosenblum
Published in: Physical Review E, Issue 96/1, 2017, Page(s) 012209, ISSN 2470-0045
Publisher: American Physical Society
DOI: 10.1103/PhysRevE.96.012209

Evolutionary optimization of network reconstruction from derivative-variable correlations

Author(s): Marc G Leguia, Ralph G Andrzejak, Zoran Levnajić
Published in: Journal of Physics A: Mathematical and Theoretical, Issue 50/33, 2017, Page(s) 334001, ISSN 1751-8113
Publisher: Institute of Physics Publishing
DOI: 10.1088/1751-8121/aa7925

SPIKE-order

Author(s): Thomas Kreuz, Eero Satuvuori, Mario Mulansky
Published in: Scholarpedia, Issue 12/7, 2017, Page(s) 42441, ISSN 1941-6016
Publisher: Scholarpedia
DOI: 10.4249/scholarpedia.42441

Intertangled stochastic motifs in networks of excitatory-inhibitory units

Author(s): Clement Zankoc, Duccio Fanelli, Francesco Ginelli, Roberto Livi
Published in: Physical Review E, Issue 96/2, 2017, ISSN 2470-0045
Publisher: American Physical Society
DOI: 10.1103/PhysRevE.96.022308

Robustness and versatility of a nonlinear interdependence method for directional coupling detection from spike trains

Author(s): Irene Malvestio, Thomas Kreuz, Ralph G. Andrzejak
Published in: Physical Review E, Issue 96/2, 2017, ISSN 2470-0045
Publisher: American Physical Society
DOI: 10.1103/PhysRevE.96.022203

Measures of Spike Train Synchrony and Directionality

Author(s): Eero Satuvuori, Irene Malvestio, Thomas Kreuz
Published in: Mathematical and Theoretical Neuroscience, Issue 24, 2017, Page(s) 201-222, ISBN 978-3-319-68297-6
Publisher: Springer International Publishing
DOI: 10.1007/978-3-319-68297-6_13

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