OBSERVING AND MAPPING MARINE ECOSYSTEMS – NEXT GENERATION TOOLS | OBAMA-NEXT | Project | Results | HORIZON | CORDIS

Resultado final

Task 7.2. Branding, DEC plans and coordination of external communication/dissemination. Lead: ScC, Partner: AU, WP leaders. The visual identity, website, and social media accounts (including Twitter, LinkedIn, and a YouTube channel) will be set up for external communication (M7.1). Graphic guidelines and templates will be developed for digital and print communication (e.g., posters, brochures, presentations) for consistent and coherent communication by all partners. The dissemination, exploitation, and communication (DEC) plan will be elaborated (D7.2), and its performance evaluated (D7.4).

Roadmap linking tech solutions

Task 4.1. Roadmap for technical solutions linking to user and policy needsLead: AZTI, Participants: AU, CEFAS, CNRS, SYKE, ISPRA, DELTARES, UNEP-WCMC, UTARTUDefining processing chains for generating technical solutions to achieve information products (WP1), including data flow, data pre-processing, algorithm and model selection, and data product definitions (D4.1). Determining limitations and applicability of these methods depending on data and their quality. Agreed-upon protocols and methods will be defined for training, testing and validating core AI modules (e.g., validation schemes, validation metrics and statistical tests

Review existing/emerging tech for benthic observations

Task 3.1. Reviewing existing and emerging technologies for benthic observationsLead: SYKE, Participants: AU, NIVA, AZTI, CSIC, AWI, NIMRD, IOBAS, LUKEThis task will establish an overview of techniques, both those that are used operationally, and emerging methods (M3.1). The catalogue will be guided by stakeholder needs (T1.3) and include a comprehensive list of existing and emerging technologies for benthic observations, with detailed information on which platforms, sensors, and analysis methods can be used for different applications. Review of literature, as well as webpages for commercial services, to assess the whole range of different technologies used or potentially suitable for characterising sea birds, benthic fauna and carbon- and biodiversity-rich habitats (D3.1).

Review existing/emerging tech for pelagic observations

Task 2.1. Reviewing existing and emerging technologies for pelagic observationsLead: CNRS, Participants: AU, AZTI, SYKE, CEFAS, HCMR, IFREMER, LUKE, RBINS, AWI, SZNReviewing the advantages, limitations, and the readiness of the technologies and the FAIRness of the data for the observation of EBVs, including their adaptability to platforms and their combination with EOVs (D2.1).

Blueprint of digital architecture

Task 4.2. Development of digital architecture and processing chainsLead: NIVA, Participants: AU, AZTI, CEFAS, RBINS, DELTARESLinking data sources (WP2-3) with the tools developed in WP4 based on processing chains and information flows (T4.1). A common digital infrastructure for data processing algorithms and models will be developed on an open platform (M4.1). This includes prototyping or including in existing frameworks (e.g., EMODnet, OBIS, SeaDataNet) to ease exploitation and use after OBAMA-NEXT has ended. Developing a blueprint of the digital architecture to ensure that the algorithms developed and applied are open sourced and documented (D4.2). This iterative process involves validation and updating the toolboxes to match the shifting needs or non-viable algorithm applications detected through T4.3.

Initial product specification

Task 1.2. Co-working and co-design processLead: AZTI; Participants: AU, SYKE, HCMR, ISPRA, UTARTU, IFREMER, CNRS, AWI, DELTARES, AAU, ScCFocus on gathering requirements, starting with an exploration phase, where the aims of the call are discussed, identify the problems to be addressed, share stakeholders’ needs and agree on the scope and specification of the information products (D1.1), including a prioritisation list for WP4 developments in the form of a periodically updated design catalogue. This phase will receive input from an online survey (M1.2), to be run prior to the kick-off meeting PAB workshop, calling for identifying the additional needs of an extended audience, to gather multiple and diverse views and foster early discussions of the PAB. In a subsequent conception phase, the PAB will co-work responses and solutions to their identified needs building on the complementary expertise of the group, making roles clear in the co-working process and safeguarding the commitment. Finally, the PAB will be challenged to reflect on feasibility of the action plan and data needs, as well as major risks and how to mitigate them. Structured participatory events will be set according to the inputs required by other WPs.

Data requirements key policies

Task 6.1. Review and evaluation of EU and international policy requirements Lead: UNEP-WCMC Participants: AU, NIVA, AZTI, HCMR, ISPRA, CNRS, UTARTU, IOBAS, AAUIdentify target policies, directives and conventions (regional, EU and International) where information products can inform with respect to design, implementation and monitoring and evaluation (D6.1). This includes identifying complementary and synergetic data needs and the identification of biodiversity core data that underpin multiple policies, directives and convention implementation as well as gaps in required information. Additionally, a governance analysis will be performed to identify (together with WP1) the enabling and constraining conditions to implement results of the project in marine biodiversity policies.

Data Management Plan

Task 7.1. Open Science and data management coordination. Lead: AU, Participants: all. The Data Management Plan will be developed (D7.1) and implemented according to the FAIR principles. Review and internal communication of OA possibilities. One person at AU will be appointed with the specific responsibility of ensuring that all partners adhere to these principles.

Publicaciones

Using long-term data series to design adequate protected areas that ensure the conservation of inconspicuous small petrel species

Autores: Andrés De la Cruz, Jorge M Pereira, Vitor H Paiva, Jaime A Ramos, Nuno Oliveira, Hany Alonso, Camilo Saavedra, José Antonio Vázquez, Isabel García‐Barón, José Manuel Arcos, Gonzalo M Arroyo
Publicado en: Journal of Applied Ecology, 2023, ISSN 1365-2664
Editor: Wiley
DOI: 10.1111/1365-2664.14524

Sustainability Meets Information Technologies: Recent Developments and Future Perspectives

Autores: Andrés Felipe Valderrama Pineda, Iva Ridjan Skov, Hanaa Dahy, Jamal Jokar Arsanjani, Ida Maria Bonnevie, Tom Børsen and Maurizio Teli
Publicado en: Sustainability, 2024, ISSN 2071-1050
Editor: MDPI Open Access Publishing
DOI: 10.3390/su16114499

Contrasting Diversity Patterns Using Autonomous Reef Monitoring Structures Deployed in Pelagic vs. Benthic Environments

Autores: Ernesto Villarino, Anders Lanzen, Naiara Rodriguez-Ezpeleta, Inaki Mendibil, Ángel Borja, Iñigo Muxika, Joxe Mikel Garmendia, Xabier Irigoien, Guillem Chust
Publicado en: SSRN, 2024, ISSN 1556-5068
Editor: Elsevier
DOI: 10.2139/ssrn.4746174

Survey of Automatic Plankton Image Recognition: Challenges, Existing Solutions and Future Perspectives

Autores: Tuomas Eerola, Daniel Batrakhanov, Nastaran Vatankhah Barazandeh, Kaisa Kraft, Lumi Haraguchi, Lasse Lensu, Sanna Suikkanen, Jukka Seppälä, Timo Tamminen, Heikki Kälviäinen
Publicado en: arXiv, 2023, ISSN 2394-1707
Editor: Cornell University
DOI: 10.48550/arXiv.2305.11739

The Portuguese man-of-war: Adrift in the North Atlantic Ocean

Autores: Luis Ferrer, Yolanda Sagarminaga, Ángel Borja, Mikel Nogues, María José Alegre, María Santos, Guillermo Boyra, Paula Álvarez, Beatriz Beldarrain, Raúl Castro, Gaizka Bidegain, Manuel González, Marta Revilla, Izaskun Zorita, Oihana Solaun, Almudena Fontán,
Publicado en: Estuarine, Coastal and Shelf Science, 2024, ISSN 1096-0015
Editor: Elsevier
DOI: 10.1016/j.ecss.2024.108732

The blue carbon of southern southwest Atlantic salt marshes and their biotic and abiotic drivers

Autores: Paulina Martinetto, Juan Alberti, María Eugenia Becherucci, Just Cebrian, Oscar Iribarne, Núria Marbà, Diana Montemayor, Eric Sparks & Raymond Ward
Publicado en: Nature Communications, 2023, ISSN 2041-1723
Editor: Nature Publishing Group
DOI: 10.1038/s41467-023-44196-w

Integrative approach to monitoring metazoan diversity and distribution in two Mediterranean coastal sites through morphology and organismal eDNA

Autores: Iole Di Capua, Fabiana Luise, Gianpaolo Zampicinini, Vittoria Roncalli, Ylenia Carotenuto, Roberta Piredda
Publicado en: Scientific Reports, Edición 14, 2024, ISSN 2045-2322
Editor: Springer Science and Business Media LLC
DOI: 10.1038/s41598-024-69520-2

Methodology for prioritizing marine environmental pressures under various management scenarios in the Black Sea

Autores: Luminita Lazar, Alina Spanu, Laura Boicenco, Andra Oros, Nicoleta Damir, Elena Bisinicu, Valeria Abaza, Adrian Filimon, George Harcota, Oana Marin, Elena Pantea, Florin Timofte, Oana Vlas, Samuli Korpinen
Publicado en: Frontiers in Marine Science, Edición 11, 2024, ISSN 2296-7745
Editor: Frontiers Media SA
DOI: 10.3389/fmars.2024.1388877

Temporal variability of coccolithophore Emiliania huxleyi blooms in the open Black Sea: Evaluation by satellite data (1998–2020)

Autores: Oleg Yunev, Jacob Carstensen, Vyacheslav Suslin, Vladimir Belokopytov, Snejana Moncheva, Ludmila Stelmakh, Laura Boicenco, Oana Vlas
Publicado en: Deep Sea Research Part I, 2024, ISSN 1879-0119
Editor: Deep Sea Research Part I: Oceanographic Research Papers
DOI: 10.1016/j.dsr.2024.104304

The NEREA Augmented Observatory: an integrative approach to marine coastal ecology

Autores: Lucia Campese, Luca Russo, Maria Abagnale, Adriana Alberti, Giancarlo Bachi, Cecilia Balestra, Daniele Bellardini, Angela Buondonno, Ulisse Cardini, Ylenia Carotenuto, Giovanni Checcucci, Maria Luisa Chiusano, Isabella D’Ambra, Giuliana d’Ippolito, Iole Di Capua, Vincenzo Donnarumma, Angelo Fontana, Marta Furia, Denisse Galarza-Verkovitch, Roberto Gallia, Karine Labadie, Serena Leone, Priscilla Licandro, Antonio Longo, Maira Maselli, Louise Merquiol, Carola Murano, Pedro H. Oliveira, Augusto Passarelli, Isabella Percopo, Aude Perdereau, Roberta Piredda, Francesca Raffini, Vittoria Roncalli, Hans-Joachim Ruscheweyh, Ennio Russo, Maria Saggiomo, Chiara Santinelli, Diana Sarno, Shinichi Sunagawa, Ferdinando Tramontano, Anna Chiara Trano, Marco Uttieri, Patrick Wincker, Gianpaolo Zampicinini, Raffaella Casotti, Fabio Conversano, Domenico D’Alelio, Daniele Iudicone, Francesca Margiotta, Marina Montresor
Publicado en: Scientific Data, Edición 11, 2024, ISSN 2052-4463
Editor: Springer Science and Business Media LLC
DOI: 10.1038/s41597-024-03787-y

Toward phytoplankton parasite detection using autoencoders

Autores: Bilik, S; Batrakhanov, D; Eerola, T; Haraguchi, L; Kraft, K; Van den Wyngaert, S; Kangas, J; Sjoqvlst, C; Madsen, K; Lens, L; Kalvalnen, H; Horak, K
Publicado en: Machine Vision and Applications, 2023, ISSN 1432-1769
Editor: Springer
DOI: 10.1007/s00138-023-01450-x

Getting the errors right: The importance of partitioning sources of uncertainty for ecological indicators

Autores: Carstensen, Jacob; Murray, Ciaran J.; Lindegarth, Mats
Publicado en: Ecological Indicators, 2024, ISSN 1872-7034
Editor: Elsevier
DOI: 10.1016/j.ecolind.2024.112637

Innovative and practical tools for monitoring and assessing biodiversity status and impacts of multiple human pressures in marine systems

Autores: Borja, Angel; Berg, Torsten; Gundersen, Hege; Hagen, Anders Gjørwad; Hancke, Kasper; Korpinen, Samuli; C. Leal, Miguel; Luisetti, Tiziana; Menchaca, Iratxe; Murray, Ciaran; Piet, GerJan; Pitois, Sophie; Rodríguez‑Ezpeleta, Naiara; Sample, James E.; Talbot, Elizabeth; Uyarra, María C.
Publicado en: Environmental Monitoring and Assessment, 2024, ISSN 1573-2959
Editor: Springer
DOI: 10.1007/s10661-024-12861-2

Quantifying bivalve phytoplankton depletion in a eutrophic system: an integrated approach

Autores: Daniel Taylor, Hans Jakobsen, Maren Moltke Lyngsgaard, Miroslaw Darecki, Mortimer Werther, Marie Maar, Camille Saurel
Publicado en: Limnology and Oceanography, 2024, ISSN 0024-3590
Editor: Wiley
DOI: 10.1002/lno.12680

Patterns in the plankton – Spatial distribution and long-term variability of copepods on the Agulhas Bank

Autores: Huggett, J.A.; Noyon, M.; Carstensen, J.; Walker, D.R.
Publicado en: Deep-Sea Research Part II: Topical Studies in Oceanography, 2023, ISSN 1879-0100
Editor: Elsevier
DOI: 10.1016/j.dsr2.2023.105265

DNA-based marine benthic assessment methods can perform as morphological ones, but an intercalibration is needed

Autores: Angel Borja, Anders Lanzén, Iñigo Muxika
Publicado en: Ecological Indicators, Edición 167, 2024, ISSN 1470-160X
Editor: Elsevier BV
DOI: 10.1016/j.ecolind.2024.112638

Monitoring water molds in northern Baltic rivers and salmon : Applicability of eDNA methods to detect Saprolegnia parasitica in river environments

Autores: Härkönen, Laura S.; Iso-Touru, Terhi; Kinnula, Hanna; Rask, Marjukka; Korkea-aho, Tiina
Publicado en: 2024
Editor: Natural Resources Institute Finland

OBSERVING AND MAPPING MARINE ECOSYSTEMS – NEXT GENERATION TOOLS

Resultado final

Publicaciones

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