Technologies for Ocean Sensing

Livrables

Engagement Strategy

A report on how TechOceanS will carry out engagement including a plan of promotional materials

Repository of developed best practice

Thematic collection of best practices in the Ocean Best Practices System

Synthetic and representative environments testing.

Report on synthetic and representative environments testing

Overview of Scientific Knowledge Exchange Activities

An overview of knowledge exchange activities reported.

Project Website

An overview of project website development functions and services

Plan for exploitation and dissemination of results

Plan for the dissemination and exploitation of Results PEDR which will outline the protocols and processes around dissemination and exploitation as well as knowledge management systems to be implemented in the project

Exploitation and dissemination of results 2

Dissemination, exploitation and communication of TechOceanS results including key messages, target stakeholders and performance indicators

Exploitation and Dissemination of Results 1

Dissemination exploitation and communication of TechOceanS results including key messages target stakeholders and performance indicators

Data acquisition module

Report on the development of a platform independent and interoperable data acquisition module

Data Management Plan

DMP including an open access data policy and data submission process Common data collection protocols and database structures will be agreed at the start of the project ensuring common standards interoperability backup and storage alongside measures for sharing data including security and encryption provenance intercommunication and knowledge sharing

Data Management plan Update M24

DMP including an open access data policy and data submission process. Common data collection protocols and database structures will be agreed at the start of the project ensuring common standards, interoperability, backup and storage alongside measures for sharing data including security and encryption, provenance, inter-communication and knowledge sharing. Update at month 24.

Publications

Ocean Gliders: Oxygen SOP

Auteurs: Lopez-Garcia, P; Hull, T; Thomsen, S.; Hahn, J. et al.
Publié dans: Ocean Gliders: Oxygen SOP (Ocean Gliders Community), 2021
Éditeur: National Oceanography Centre

User’s Manual: Microplastics sampler Version 01

Auteurs: Morris, A.
Publié dans: Ocean Best Practices System, 2024
Éditeur: National Oceanography Centre for TechOceanS Project
DOI: 10.25607/obp-2023

LabSTAF and RunSTAF Handbook: 2408-014-HB | Issue F.

Auteurs: Oxborough, K.
Publié dans: Doc No. 2408-014-HB | Numéro F, Numéro 171, 2022
Éditeur: Ocean Best Practices
DOI: 10.25607/obp-1029.4

Cytochip User Manual: Marine Deployable impedance and fluorescence flow cytometer

Auteurs: Siracusa, F., Butement, J.
Publié dans: Ocean Best Practices System, 2024
Éditeur: National Oceanography Centre for TechOceanS Project
DOI: 10.25607/obp-2021

User's Manual: NOC LOC Dual Nutrient (Nitrate / phosphate) Sensor. Version 1

Auteurs: Hanz, R., Patey, M.D
Publié dans: Ocean Best Practices System, 2024
Éditeur: National Oceanography Centre for TechOceanS Project
DOI: 10.25607/obp-2027

Ocean Gliders: Nutrient SOP

Auteurs: Krahmann, G.; Begler, C.; Birchill, A.; Patey, M.; Beaton, A. et al
Publié dans: Ocean Gliders: Nutrient SOP (Ocean Gliders Community), 2021
Éditeur: National Oceanography Centre

User’s Manual: TechOceanS Flexible Fluidic Bioassay Sensor. Version 1.0

Auteurs: Morris, A., Murphy, C., Lopez-Garcia, P., Panagiotis, G.
Publié dans: Ocean Best Practices System, 2024
Éditeur: National Oceanography Centre for TechOceanS Project
DOI: 10.25607/obp-2020

User’s Manual: NOC LOC Dual Nutrient (Silicate / phosphate) Sensor. Version 1

Auteurs: Hanz, R., Patey, M.D.
Publié dans: Ocean Best Practices System, 2024
Éditeur: National Oceanography Centre
DOI: 10.25607/obp-2026

User's Manual: Flexible Fluidics for Genomics, Module Operation. Version 1.0.

Auteurs: McQuillan, J.S., Bhuiyan W. T.
Publié dans: Ocean Best Practices System, 2024
Éditeur: National Oceanography Centre for TechOceanS Project
DOI: 10.25607/obp-2025

User’s Manual: NOC LOC Dual Carbonate Sensor. Version 1.

Auteurs: Arundell, M., Hanz, R.
Publié dans: Ocean Best Practices System, 2024
Éditeur: National Oceanography Centre for TechOceanS Project
DOI: 10.25607/obp-2024

Open Proposal ASSET: Generic CLUSTERING Mechanism, Task, Budget & Impact

Auteurs: Grigorov, I., Trabut, E., Brown, E. J., Nunes, A., Lecornec, A., Ravagnan, E., Pieri, G., Rodrigues, J., Bilic, J., Dimitrova, L., Norton, M., Vukomanovic, M., Gojani, N., Kulan, N., Erkoreka, O., Lopez-Garcia, P., Pereira, T., & Geraskova, V.
Publié dans: Open Proposal ASSET, 2023
Éditeur: Zenodo
DOI: 10.5281/zenodo.10046676

Measuring High Resolution Nitrate Profiles in the Open Ocean on a Glider

Auteurs: Rudolf Hanz, Patricia Lopez Garcia, John Walk, Allison Schaap, Loizos Groutas, Daniel Hayes, Sergey Vekli, Rana Abu Alhaija, Eduardo Caudert, Samuel Marrero, Carlos Barrera, Matthew Mowlem
Publié dans: Challenger Society Conference 2024 Book of Abstracts, 2024, Page(s) 108
Éditeur: Challenger Society

LabSTAF and RunSTAF Handbook 2408-014-HB Issue E.

Auteurs: Oxborough, K
Publié dans: LabSTAF and RunSTAF Handbook 2408-014-HB Numéro E. (Ocean Best Practices), 2021
Éditeur: Chelsea Technologies Ltd
DOI: 10.25607/obp-1029.3

Optimizing Plankton Image Classification With Metadata-Enhanced Representation Learning

Auteurs: Mojtaba Masoudi, Sarah L.C. Giering, Noushin Eftekhari, Miquel Massot-Campos, Jean-Olivier Irisson, Blair Thornton
Publié dans: IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing, Numéro 17, 2024, Page(s) 17117-17133, ISSN 1939-1404
Éditeur: Institute of Electrical and Electronics Engineers
DOI: 10.1109/jstars.2024.3424498

European marine omics biodiversity observation network: a strategic outline for the implementation of omics approaches in ocean observation

Auteurs: Ioulia Santi, Odette Beluche, Mélanie Beraud, Pier Luigi Buttigieg, Raffaella Casotti, Cymon J. Cox, Michael Cunliffe, Neil Davies, Oihane Diaz de Cerio, Katrina Exter, Anne Emmanuelle Kervella, Georgios Kotoulas, Rune Lagaisse, Arnaud Laroquette, Bruno Louro, Fabrice Not, Matthias Obst, Christina Pavloudi, Julie Poulain, Kim Præbel, Jan Vanaverbeke, Nicolas Pade
Publié dans: Frontiers in Marine Science, Numéro 10, 2023, ISSN 2296-7745
Éditeur: Frontiers in Marine Science
DOI: 10.3389/fmars.2023.1118120

Integrative approach to monitoring metazoan diversity and distribution in two Mediterranean coastal sites through morphology and organismal eDNA

Auteurs: Iole Di Capua, Fabiana Luise, Gianpaolo Zampicinini, Vittoria Roncalli, Ylenia Carotenuto, Roberta Piredda
Publié dans: Scientific Reports, Numéro 14, 2024, ISSN 2045-2322
Éditeur: Nature Publishing Group
DOI: 10.1038/s41598-024-69520-2

Leveraging Metadata in Representation Learning With Georeferenced Seafloor Imagery

Auteurs: Yamada T, Massot-Campos M, Prügel-Bennett A, Williams SB, Pizarro O, Thornton B.
Publié dans: Leveraging Metadata in Representation Learning With Georeferenced Seafloor Imagery, Numéro 7815 - 7822, 2021, Page(s) Vol 6 Iss 4, ISSN 2377-3766
Éditeur: IEEE
DOI: 10.1109/lra.2021.3101881

Proposed synergies between Oceanography and Metrology.

Auteurs: Susan Elizabeth Hartman, Andrew Russell Gates, Patricia Lopez-Garcia, Roberto Bozzano, Eric Delory, Paolo Favali, Dominique Lefevre, Laure Chirurgien, Sara Pensieri, George Petihakis, Rajesh Nair, Silvana Neves, Juan José Dañobeitia, Florence Salvetat, Marc Le Menn, Jukka Seppälä, Katrin Schroeder, Jaume Piera
Publié dans: Perspective, Front. Mar. Sci. - Ocean Observation, Numéro 10, 2023, ISSN 2296-7745
Éditeur: FRONTIERS
DOI: 10.3389/fmars.2023.1192030

Industry Partnership: Lab on Chip Chemical Sensor Technology for Ocean Observing

Auteurs: Matt Mowlem; Matt Mowlem; Alexander Beaton; Alexander Beaton; Robin Pascal; Robin Pascal; Allison Schaap; Socratis Loucaides; Sam Monk; Andrew Morris; Christopher L. Cardwell; Christopher L. Cardwell; Sara E. Fowell; Matthew D. Patey; Patricia López-García
Publié dans: Industry Partnership: Lab on Chip Chemical Sensor Technology for Ocean Observing, Numéro 8, 2021, ISSN 2296-7745
Éditeur: National Oceanography Centre
DOI: 10.3389/fmars.2021.697611

Discrimination of Microplastics and Phytoplankton Using Impedance Cytometry

Auteurs: Jonathan T. Butement, Xiang Wang, Fabrizio Siracusa, Emily Miller, Katsiaryna Pabortsava, Matthew Mowlem, Daniel Spencer, Hywel Morgan
Publié dans: ACS Sensors, Numéro 9, 2024, Page(s) 5206-5213, ISSN 2379-3694
Éditeur: ACS Sensors
DOI: 10.1021/acssensors.4c01353

Development of a quantitative colorimetric LAMP assay for fast and targeted molecular detection of the invasive lionfish Pterois miles from environmental DNA

Auteurs: Katherine Hartle-Mougiou, Chrysoula Gubili, Panagiota Xanthopoulou, Panagiotis Kasapidis, Martha Valiadi, Electra Gizeli
Publié dans: Frontiers in Marine Science, Numéro 11, 2024, ISSN 2296-7745
Éditeur: Frontiers Marine Science
DOI: 10.3389/fmars.2024.1358793

Technologies for ocean sensing (TechOceanS project)

Auteurs: López-García, P., Mowlem, M.
Publié dans: Proceedings of the 10th EuroGOOS International Conference, 2023, Page(s) 368
Éditeur: EuroGOOS

Rapid over-horizon awareness of AUV image datasets over low communication bandwidths

Auteurs: Thornton, Blair, Massot Campos, Miguel, Bodenmann, Adrian, Simmons, Samuel, Hirai, Chihiro
Publié dans: IEEE AUV2024 Proceedings, 2024
Éditeur: IEEE AUV2024

Towards sensor agnostic artificial intelligence for underwater imagery

Auteurs: Miquel Massot-Campos, Takaki Yamada, Blair Thornton
Publié dans: 2023 IEEE Underwater Technology (UT), 2024, Page(s) 1-6
Éditeur: IEEE
DOI: 10.1109/ut49729.2023.10103403

MaCal – Macro Lens Calibration and the Focus Stack Camera Model

Auteurs: Weng X, She M, Nakath D, Köser K.
Publié dans: MaCal – Macro Lens Calibration and the Focus Stack Camera Model (International Conference on 3D Imaging, Modeling, Processing, Visualization and Transmission (3DIMPVT)), 2021
Éditeur: GEOMAR Helmholtz Centre for Ocean Research Kiel
DOI: 10.1109/3dv53792.2021.00024

Technologies for Ocean Sensing project developments in imaging and sensing

Auteurs: Matthew Mowlem, Fillipa Carvalho, Rudolf Hanz, Ehsan Abdi, Camile Catalano, Katherine Hartle Mougiou, Rana Abualhaija, Susan Evans, Dan Hayes, Ahmed Alrefaey, Reuben Forrester, Jean-Olivier Irisson, Martin Arundel, Sarah Giering, Kevin Köser, Nathan Briggs, Electra Gizeli, Patricia Lopez-Garcia, Wahida Bhuiyan, Peter Glynne-Jones, Jake Ludgate, Jonathan Butement, Lionel Guidi, Miguel Massot Campo
Publié dans: OCEANS 2023 - Limerick, 2024, Page(s) 1-13
Éditeur: IEEE
DOI: 10.1109/oceanslimerick52467.2023.10244285

Visual Tomography: Physically Faithful Volumetric Models of Partially Translucent Objects

Auteurs: David Nakath, Xiangyu Weng, Mengkun She, Kevin Köser
Publié dans: 2024 International Conference on 3D Vision (3DV), 2024, Page(s) 1605-1615
Éditeur: IEEE
DOI: 10.1109/3dv62453.2024.00159

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