Accelerated Development of multiple-stress tolerAnt PoTato

Informazioni relative al progetto

ADAPT

ID dell’accordo di sovvenzione: 862858

DOI 10.3030/862858

Progetto chiuso

Data della firma CE 27 Giugno 2020

Data di avvio 1 Luglio 2020

Data di completamento 31 Ottobre 2024

Finanziato da

• SOCIETAL CHALLENGES - Food security, sustainable agriculture and forestry, marine, maritime and inland water research, and the bioeconomy

Costo totale € 4 999 973,75

Contributo UE € 4 999 972,00

Coordinato da

UNIVERSITAT WIEN
Austria

CORDIS fornisce collegamenti ai risultati finali pubblici e alle pubblicazioni dei progetti ORIZZONTE.

I link ai risultati e alle pubblicazioni dei progetti del 7° PQ, così come i link ad alcuni tipi di risultati specifici come dataset e software, sono recuperati dinamicamente da .OpenAIRE .

Risultati finali

Demonstrators, pilots, prototypes (8)

Potato ‘omics data analysis pipelines

Potato ‘omics data analysis pipelines standardised and made available for the scientific community (M30)

PEDR first update and adjustment

Initial Plan for Exploitation and Dissemination of Results PEDR (M6), which will define handling of IPR issues, goals/targets of dissemination and implementation in commercial products of the breeders. This plan will be continuously updated throughout the project (M12, 24 up to M48)

PEDR established

Initial Plan for Exploitation and Dissemination of Results PEDR will define handling of IPR issues, goals/targets of dissemination and implementation in commercial products of the breeders. This plan will be continuously updated throughout the project.

PEDR second update and adjustment

Initial Plan for Exploitation and Dissemination of Results PEDR (M6), which will define handling of IPR issues, goals/targets of dissemination and implementation in commercial products of the breeders. This plan will be continuously updated throughout the project (M12, 24 up to M48)

Communication infrastructure established

Communication infrastructure established; the project website goes online to allow sharing of generated data, and general information (M6)

StressKnowledgeMap

StressKnowledgeMap: web application enabling standardised construction of integrated knowledge network and its interrogation (M15)

PEDR third update

Initial Plan for Exploitation and Dissemination of Results PEDR (M6), which will define handling of IPR issues, goals/targets of dissemination and implementation in commercial products of the breeders. This plan will be continuously updated throughout the project (M12, 24 up to M48)

Data visualisation tools updated

Data visualisation tools updated based on the updates in knowledge network (M18)

Open Research Data Pilot (1)

ORD pilot and Data Management Plan

Data Management Plan DMP implemented and guidelines for Open Research Data pilot defined M6

Documents, reports (2)

Report on field day/workshop

One joint field day and one joint workshop organized with other EU projects funded under this call or in a similar topic (M24 and M42)

Report of farmers' perception survey

Descriptive report of farmers perception survey and set of recommendations for dissemination activities M12

Pubblicazioni

Peer reviewed articles (20)

TGA transcription factors—Structural characteristics as basis for functional variability

Autori: Špela Tomaž; Špela Tomaž; Kristina Gruden; Anna Coll
Pubblicato in: Crossref, Numero 3, 2022, ISSN 1664-462X
Editore: Frontiers Media S. A.
DOI: 10.3389/fpls.2022.935819

Assimilate highway to sink organs – Physiological consequences of SP6A overexpression in transgenic potato (Solanum tuberosum L.)

Autori: Günter G.Lehretz SophiaSonnewald UweSonnewald
Pubblicato in: Journal of Plant Physiology, Numero 226, 2021, Pagina/e 153530, ISSN 0176-1617
Editore: Elsevier BV
DOI: 10.1016/j.jplph.2021.153530

pISA-tree - a data management framework for life science research projects using a standardised directory tree

Autori: Marko Petek, Maja Zagorščak, Andrej Blejec, Živa Ramšak, Anna Coll, Špela Baebler & Kristina Gruden
Pubblicato in: Scientific data, 2022, ISSN 2052-4463
Editore: Nature Research
DOI: 10.1038/s41597-022-01805-5

Cell-type proteomic and metabolomic resolution of early and late grain filling stages of wheat endosperm

Autori: Shuang Zhang, Arindam Ghatak, Mitra Mohammadi Bazargani, Hannes Kramml, Fujuan Zang, Shuang Gao, Živa Ramšak, Kristina Gruden, Rajeev K. Varshney, Dong Jiang, Palak Chaturvedi, Wolfram Weckwerth
Pubblicato in: Plant Biotechnology Journal, 2023, ISSN 1467-7652
Editore: John Wiley & Sons
DOI: 10.1111/pbi.14203

Chloroplast redox state changes mark cell-to-cell signaling in the hypersensitive response

Autori: Tjaša Lukan, Anže Županič, Tjaša Mahkovec Povalej, Jacob O. Brunkard, Mirjam Kmetič, Mojca Juteršek, Špela Baebler, Kristina Gruden
Pubblicato in: New Physiologist, 2022, ISSN 1469-8137
Editore: John Wiley & Sons
DOI: 10.1111/nph.18425

Water stress resilient cereal crops: lessons from wild relatives

Autori: Toulotte JM, Pantazopoulou CK, Sanclemente MA, Voesenek LA, Sasidharan R.
Pubblicato in: Journal of Integrative Plant Biology, 2022, Pagina/e Online ahead of print, ISSN 1365-313X
Editore: Wiley
DOI: 10.1111/jipb.13222

Organelles and phytohormones: a network of interactions in plant stress responses

Autori: Andras Bittner, Agata Cieśla, Kristina Gruden, Tjaša Lukan, Sakil Mahmud, Markus Teige, Ute C Vothknecht, Bernhard Wurzinger Author Notes
Pubblicato in: Journal of Experimental Botany, 2022, ISSN 1460-2431
Editore: Oxford University Press
DOI: 10.1093/jxb/erac384

Profiling of 1-aminocyclopropane-1-carboxylic acid and selected phytohormones in Arabidopsis using liquid chromatography-tandem mass spectrometry

Autori: Karady, Michal; Hladík, Pavel; Cermanová, Kateřina; Jiroutová, Petra; Antoniadi, Ioanna; Casanova-Sáez, Rubén; Ljung, Karin; Novák, Ondřej
Pubblicato in: Crossref, Numero 1, 2024, ISSN 1746-4811
Editore: BioMed Central
DOI: 10.1186/s13007-024-01165-8

Low dose ribosomal DNA P-loop mutation affects development and enforces autophagy in Arabidopsis

Autori: Thiruvenkadam Shanmugam, Palak Chaturvedi, Deniz Streit, Arindam Ghatak, Thorsten Bergelt, Stefan Simm, Wolfram Weckwerth & Enrico Schleiff
Pubblicato in: RNA Biology, 2023, ISSN 1555-8584
Editore: Taylor&Francis
DOI: 10.1080/15476286.2023.2298532

stress knowledge map: a knowledge graph resource for systems biology analysis of plant stress responses

Autori: Carissa Bleker, Živa Ramšak, Andras Bittner, Vid Podpečan ,Maja Zagorščak, Bernhard Wurzinger, Špela Baebler, Marko Petek, Maja Križnik, Annelotte van Dieren, Juliane Gruber, Leila Afjehi-Sadat, Wolfram Weckwerth, Anže Županič, Markus Teige, Ute C. Vothknecht, Kristina Gruden
Pubblicato in: Plant Communications, Numero Volume 5.Numero. 5,May 13, 2024, 2024, ISSN 0092-8674
Editore: Cell Press
DOI: 10.1016/j.xplc.2024.100920

A helping hand when drowning: The versatile role of ethylene in root flooding resilience

Autori: Hendrika A.C.F. Leeggangers 1, Natalia Yaneth Rodriguez-Granados 1, Monika Gyöngyi Macias-Honti 1, Rashmi Sasidharan
Pubblicato in: Environmental and Experimental Botany, 2023, ISSN 1873-7307
Editore: Elsevier B.V.
DOI: 10.1016/j.envexpbot.2023.105422

A mini-TGA protein modulates gene expression through heterogeneous association with transcription factors

Autori: Špela Tomaž, Marko Petek, Tjaša Lukan, Karmen Pogačar, Katja Stare, Erica Teixeira Prates, Daniel A Jacobson, Jan Zrimec, Gregor Bajc, Matej Butala, Maruša Pompe Novak, Quentin Dudley, Nicola Patron, Ajda Taler-Verčič, Aleksandra Usenik, Dušan Turk, Salomé Prat, Anna Coll, Kristina Gruden
Pubblicato in: Plant Physiology, 2023, ISSN 0032-0889
Editore: American Society of Plant Biologists
DOI: 10.1093/plphys/kiac579

Cold plasma within a stable supercavitation bubble – A breakthrough technology for efficient inactivation of viruses in water

Autori: Arijana Filipić a, David Dobnik a, Ion Gutiérrez-Aguirre a, Maja Ravnikar a, Tamara Košir a, Špela Baebler a, Alja Štern b, Bojana Žegura b, Martin Petkovšek c, Matevž Dular c, Miran Mozetič d, Rok Zaplotnik d, Gregor Primc d
Pubblicato in: Enviroment International, 2023, ISSN 1873-6750
Editore: PERGAMON-ELSEVIER SCIENCE LTD.
DOI: 10.1016/j.envint.2023.108285

Spatial control of potato tuberization by the TCP transcription factor BRANCHED1b

Autori: Michael Nicolas 1 , Rafael Torres-Pérez 2 , Vanessa Wahl 3 , Eduard Cruz-Oró 4 , María Luisa Rodríguez-Buey 4 , Angel María Zamarreño 5 , Beatriz Martín-Jouve 6 , José María García-Mina 5 , Juan Carlos Oliveros 2 , Salomé Prat 4 7 , Pilar Cubas 8
Pubblicato in: Nature plants, 2022, ISSN 2055-0278
Editore: Nature Publishing Group
DOI: 10.1038/s41477-022-01112-2.

Farmers Feel the Climate Change: Variety Choice as an Adaptation Strategy of European Potato Farmers

Autori: Philipp von Gehren 1, Svenja Bomers 1, Tanja Tripolt 2, Josef Söllinger 3, Noémie Prat 1, Berta Redondo 4, Romans Vorss 4, Markus Teige 5 , Anita Kamptner 6 and Alexandra Ribarits 1,*
Pubblicato in: Climate, 2023, ISSN 2225-1154
Editore: MDPI
DOI: 10.3390/cli11090189

Allelic variants of a potato HEAT SHOCK COGNATE 70 gene confer improved tuber yield under a wide range of environmental conditions

Autori: Raymond Campbell, Laurence Ducreux, Graham Cowan, Vanessa Young, Gift Chinoko, Gloria Chitedze, Stanley Kwendani, Margaret Chiipanthenga, Craita E. Bita, Obed Mwenye, Hassan Were, Lesley Torrance, Sanjeev Kumar Sharma, Robert D. Hancock, Glenn J. Bryan, Mark Taylor
Pubblicato in: Food and Energy Security, 2022, ISSN 2048-3694
Editore: John Wiley & Sons
DOI: 10.1002/fes3.377

Biosensors: A Sneak Peek into Plant Cell’s Immunity

Autori: Valentina Levak 1,2,*, Tjaša Lukan 1 , Kristina Gruden 1 and Anna Coll 1
Pubblicato in: Life, 2021, ISSN 2075-1729
Editore: MDPI
DOI: 10.3390/life11030209

Paintomics 4: new tools for the integrative analysis of multi-omics datasets supported by multiple pathway databases

Autori: Tianyuan Liu1, Pedro Salguero2, Marko Petek 3, Carlos Martinez-Mira4, Leandro Balzano-Nogueira5, Zˇiva Ramsˇak 3, Lauren McIntyre6, Kristina Gruden3, Sonia Tarazona2 and Ana Conesa
Pubblicato in: Nucleic Acid Research, 2022, Pagina/e Pages W551–W559, ISSN 1362-4962
Editore: Oxford University Press
DOI: 10.1093/nar/gkac352

Phased, chromosome-scale genome assemblies of tetraploid potato reveals a complex genome, transcriptome, and predicted proteome landscape underpinning genetic diversity

Autori: Genevieve Hoopes, Xiaoxi Meng, John P. Hamilton, Sai Reddy Achakkagari, Fernanda de Alves Freitas Guesdes, Marie E. Bolger, Joseph J. Coombs, Danny Esselink, Natalie R. Kaiser, Linda Kodde, Maria Kyriakidou, Brian Lavrijssen, Natascha van Lieshout, Rachel Shereda, Heather K. Tuttle, Brieanne Vaillancourt, Joshua C. Wood, Jan M. de Boer, Nolan Bornowski, Peter Bourke, David Douches, Herman J. van E
Pubblicato in: MOLECULAR PLANT, Numero Online ahead of print, 2022, ISSN 1674-2052
Editore: Oxford University Press
DOI: 10.1016/j.molp.2022.01.003

Intertwined Roles of Reactive Oxygen Species and Salicylic Acid Signaling Are Crucial for the Plant Response to Biotic Stress

Autori: Tjaša Lukan and Anna Coll
Pubblicato in: Molecular Science, 2022, ISSN 1422-0067
Editore: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms23105568

Book chapters (3)

Toward the Design of Potato Tolerant to Abiotic Stress

Autori: Raymond Campbell, Laurence J. M. Ducreux, Elena Mellado-Ortega, Robert D. Hancock & Mark A. Taylor
Pubblicato in: Solanum tuberosum - Methods and Protocols, 2021, Pagina/e pp 387–399, ISBN 978-1-0716-1609-3
Editore: Humana, New York, NY
DOI: 10.1007/978-1-0716-1609-3_19

Methodologies for Discovery and Quantitative Profiling of sRNAs in Potato

Autori: DOBNIK, David, GRUDEN, Kristina, RAMŠAK, Živa, COLL RIUS, Anna
Pubblicato in: Methods in molecular biology, Numero 2354, 2021, ISBN 978-1-0716-1609-3
Editore: Humana Press, cop.
DOI: 10.1007/978-1-0716-1609-3_11

RNA Sequencing Analyses for Deciphering Potato Molecular Responses

Autori: Živa Ramšak, Marko Petek & Špela Baebler
Pubblicato in: Solanum tuberosum - Methods and Protocols, 2021, Pagina/e pp 57–94
Editore: Humana, New York, NY
DOI: 10.1007/978-1-0716-1609-3_3

Conference proceedings (2)

ADAPT –Accelerated development of multiple-stress tolerant potato

Autori: Ribarits A, von Gehren P, Bomers S, Prat N, Tripolt T, Söllinger J
Pubblicato in: Vereinigung der Pflanzenzüchter und Saatgutkaufleute Österreichs (Ed), 71. Jahrestagung 2020, 2021, Pagina/e 35-36
Editore: BOKU-University of Natural Resources and Life Sciences

DAP-Seq Identification of Transcription Factor-Binding Sites in Potato

Autori: José M. Franco-Zorrilla & Salomé Prat
Pubblicato in: Solanum tuberosum - Methods and Protocols, 2021, Pagina/e pp 123–142, ISBN 978-1-0716-1609-3
Editore: Humana, New York, NY
DOI: 10.1007/978-1-0716-1609-3_6

Monographic books (1)

Solanum tuberosum - Methods and Protocols

Autori: David Dobnik, Kristina Gruden, Živa Ramšak, Anna Coll
Pubblicato in: Solanum tuberosum - Methods and Protocols, 2021, ISBN 978-1-0716-1609-3
Editore: Humana New York, NY
DOI: 10.1007/978-1-0716-1609-3