Rewiring photorespiration using natural and synthetic pathways to sustainably increase crop yield

Publications

Shifts in carbon partitioning by photosynthetic activity increase terpenoid synthesis in glandular trichomes

Author(s): Nima P. Saadat, Marvin van Aalst, Alejandro Brand, Oliver Ebenhöh, Alain Tissier, Anna B. Matuszyńska
Published in: The Plant Journal, 2023, ISSN 0960-7412
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/tpj.16352

Modulation of xanthophyll cycle impacts biomass productivity in the marine microalga Nannochloropsis

Author(s): Giorgio Perin, Alessandra Bellan, Tim Michelberger, Dagmar Lyska, Setsuko Wakao, Krishna K Niyogi, Tomas Morosinotto
Published in: Proceedings of the National Academy of Sciences, Issue Volume 120, Number 25, 2023, Page(s) e2214119120, ISSN 0027-8424
Publisher: National Academy of Sciences
DOI: 10.1073/pnas.2214119120

Impact of the carbon flux regulator protein pirC on ethanol production in engineered cyanobacteria

Author(s): Böhm Julien, Kauss Karsten, Michl Klaudia, Engelhardt Lisa, Brouwer Eva-Maria, Hagemann Martin
Published in: Frontiers in Microbiology, Issue Volume 14, 2023, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2023.1238737

Tailoring confocal microscopy for real-time analysis of photosynthesis at single-cell resolution

Author(s): Mattia Storti, Haythem Hsine, Clarisse Uwizeye, Olivier Bastien, Daniel P. Yee, Fabien Chevalier, Johan Decelle, Cécile Giustini, Daniel Béal, Gilles Curien, Giovanni Finazzi, Dimitri Tolleter
Published in: Cell Reports Methods, 2023, ISSN 2667-2375
Publisher: Cell Press Elsevier Inc
DOI: 10.1016/j.crmeth.2023.100568

Improving photosynthetic efficiency toward food security: Strategies, advances, and perspectives

Author(s): Edward N. Smith; Marvin van Aalst; Tiina Tosens; Ülo Niinemets; Benjamin Stich; Tomas Morosinotto; Alessandro Alboresi; Tobias J. Erb; Paul A. Gómez-Coronado; Dimitri Tolleter; Giovanni Finazzi; Gilles Curien; Matthias Heinemann; Oliver Ebenhöh; Julian M. Hibberd; Urte Schlüter; Tianshu Sun; Andreas P.M. Weber
Published in: Molecular Plant, 2023, ISSN 1674-2052
Publisher: Oxford University Press
DOI: 10.1016/j.molp.2023.08.017

The Arabidopsis leaf quantitative atlas: a cellular and subcellular mapping through unified data integration

Author(s): Dimitri Tolleter, Edward N. Smith, Clémence Dupont-Thibert, Clarisse Uwizeye, Denis Vile, Pauline Gloaguen, Denis Falconet, Giovanni Finazzi, Yves Vandenbrouck, Gilles Curien
Published in: Quantitative Plant Biology, Issue 5, 2024, ISSN 2632-8828
Publisher: Cambridge University Press
DOI: 10.1017/qpb.2024.1

What controls carbon sequestration in plants under which conditions?

Author(s): Tim Nies, Marvin van Aalst, Nima Saadat, Josha Ebeling, Oliver Ebenhöh
Published in: Biosystems, Issue Volume 231, 2023, Page(s) 104968, ISSN 0303-2647
Publisher: Elsevier BV
DOI: 10.1016/j.biosystems.2023.104968

Adaptive laboratory evolution recruits the promiscuity of succinate semialdehyde dehydrogenase to repair different metabolic deficiencies

Author(s): Hai He, Paul A. Gómez-Coronado, Jan Zarzycki, Sebastian Barthel, Jörg Kahnt, Peter Claus, Moritz Klein, Melanie Klose, Valérie de Crécy-Lagard, Daniel Schindler, Nicole Paczia, Timo Glatter, Tobias J. Erb
Published in: Nature Communications, Issue 15, 2024, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-024-53156-x

Implementation of the β-hydroxyaspartate cycle increases growth performance of Pseudomonas putida on the PET monomer ethylene glycol

Author(s): Lennart Schada von Borzyskowski, Helena Schulz-Mirbach, Mauricio Troncoso Castellanos, Francesca Severi, Paul A. Gómez-Coronado, Nicole Paczia, Timo Glatter, Arren Bar-Even, Steffen N. Lindner, Tobias J. Erb
Published in: Metabolic Engineering, Issue Volume 76, 2023, Page(s) 97-109, ISSN 1096-7176
Publisher: Academic Press
DOI: 10.1016/j.ymben.2023.01.011

PlantACT! : how to tackle the climate crisis

Author(s): Heribert Hirt, Salim Al-Babili, Marilia Almeida-Trapp, Martin Antoine, Manuel Aranda, Dorothea Bartels, Malcolm Bennett, Ikram Blilou, Damian Boer, Alix Boulouis, Chris Bowler, Sophie Brunel-Muguet, Fabien Chardon, Jean Colcombet, Vincent Colot, Agata Daszkowska-Golec, Jose R. Dinneny, Ben Field, Katja Froehlich, Catherine H. Gardener, Alain Gojon, Eric Gomès, Eva María Gómez Álvarez, Crisanto
Published in: Trends in Plant Science, Issue Volume 28, Issue 5, 2023, Page(s) 537-543, ISSN 1360-1385
Publisher: Elsevier BV
DOI: 10.1016/j.tplants.2023.01.005

Computational Analysis of Alternative Photosynthetic Electron Flows Linked With Oxidative Stress

Author(s): Saadat Nima P., Nies Tim, van Aalst Marvin, Hank Brandon, Demirtas Büsra, Ebenhöh Oliver, Matuszyńska Anna
Published in: Frontiers in Plant Science, Issue Volume 12, 2021, ISSN 1664-462X
Publisher: Frontiers Media S. A.
DOI: 10.3389/fpls.2021.750580

Europe’s Farm to Fork Strategy and Its Commitment to Biotechnology and Organic Farming: Conflicting or Complementary Goals?

Author(s): Kai P. Purnhagen, Stephan Clemens, Dennis Eriksson, Louise O. Fresco, Jale Tosun, Matin Qaim, Richard G.F. Visser, Andreas P.M. Weber, Justus H.H. Wesseler, David Zilberman
Published in: Trends on Plant Science, 2021, ISSN 1878-4372
Publisher: Elsevier Ltd.
DOI: 10.1016/j.tplants.2021.03.012

Variation in leaf photosynthetic capacity within plant canopies: optimization, structural, and physiological constraints and inefficiencies

Author(s): Ülo Niinemets
Published in: Photosynthesis Research, 2023, Page(s) 1-19, ISSN 0166-8595
Publisher: Kluwer Academic Publishers
DOI: 10.1007/s11120-023-01043-9

COBREXA.jl: constraint-based reconstruction and exascale analysis

Author(s): Miroslav Kratochvíl, Laurent Heirendt, St Elmo Wilken, Taneli Pusa, Sylvain Arreckx, Alberto Noronha, Marvin van Aalst, Venkata P Satagopam, Oliver Ebenhöh, Reinhard Schneider, Christophe Trefois, Wei Gu
Published in: Bioinformatics, Issue Volume 38, Issue 4, 2021, Page(s) 1171–1172, ISSN 1367-4803
Publisher: Oxford University Press
DOI: 10.1093/bioinformatics/btab782

Knowledge of Regulation of Photosynthesis in Outdoor Microalgae Cultures Is Essential for the Optimization of Biomass Productivity

Author(s): Giorgio Perin, Francesca Gambaro and Tomas Morosinotto
Published in: Front. Plant Sci., Issue Volume 13, 2022, ISSN 1664-462X
Publisher: Frontiers Media S. A.
DOI: 10.3389/fpls.2022.846496

Photorespiration is the solution, not the problem

Author(s): Laia Segura Broncano, Krzysztof Robin Pukacz, Vanessa Reichel-Deland, Urte Schlüter, Sebastian Triesch, Andreas P.M. Weber
Published in: Journal of Plant Physiology, Issue Volume 282, 2023, Page(s) 153928, ISSN 0176-1617
Publisher: Elsevier BV
DOI: 10.1016/j.jplph.2023.153928

Understanding regulation in complex environments: a route to enhance photosynthetic light-reactions in microalgae photobioreactors

Author(s): Perin G, Morosinotto T
Published in: Frontiers in Photobiology, Issue 1, 2023, Page(s) 1274525, ISSN 2813-8228
Publisher: Lausanne Switzerland: Frontiers Media SA
DOI: 10.3389/fphbi.2023.1274525

Machine Learning-Supported Enzyme Engineering toward Improved CO2-Fixation of Glycolyl-CoA Carboxylase

Author(s): Daniel G. Marchal, Luca Schulz, Ingmar Schuster, Jelena Ivanovska, Nicole Paczia, Simone Prinz, Jan Zarzycki, Tobias J. Erb
Published in: ACS Synthetic Biology, Issue Issue 12, Volume 12, 2023, Page(s) 3521–3530, ISSN 2161-5063
Publisher: American Chemical Society
DOI: 10.1021/acssynbio.3c00403

Constructing and analysing dynamic models with modelbase v1.2.3: a software update.

Author(s): Marvin van Aalst; Oliver Ebenhöh; Anna Matuszyńska
Published in: BMC Bioinformatics, Issue Volume 22, Issue 1, 2021, Page(s) 1-15, ISSN 1471-2105
Publisher: BioMed Central
DOI: 10.1186/s12859-021-04122-7

A synthetic C4 shuttle via the β-hydroxyaspartate cycle in C3 plants

Author(s): Roell MS, Schada von Borzykowski L, Westhoff P, Plett A, Paczia N, Claus P, Urte S, Erb TJ, Weber APM
Published in: Proc Natl Acad Sci U S A, Issue 118(21), 2021, ISSN 1091-6490
Publisher: Proc Natl Acad Sci U S A
DOI: 10.1073/pnas.2022307118

<i>Brassicaceae</i> display variation in efficiency of photorespiratory carbon-recapturing mechanisms

Author(s): Urte Schlüter; Jacques W Bouvier; Ricardo Guerreiro; Milena Malisic; Carina Kontny; Philipp Westhoff; Benjamin Stich; Andreas P M Weber
Published in: Journal of Experimental Botany, Issue Volume 74, Issue 21, 2023, Page(s) 6631–6649, ISSN 0022-0957
Publisher: Oxford University Press
DOI: 10.1093/jxb/erad250

Network Reconstruction and Modelling Made Reproducible with moped

Author(s): Nima P. Saadat, Marvin van Aalst andOliver Ebenhöh
Published in: Metabolites, Issue 12(4), 275, 2022, ISSN 2218-1989
Publisher: MDPI
DOI: 10.3390/metabo12040275

Metabolic modeling of energy supply balance in photosynthesis

Author(s): Nima P. Saadat
Published in: Faculty of Mathematics and Natural Sciences of the of the Heinrich-Heine-University of Düsseldorf, Issue 3, 2023
Publisher: Heinrich-Heine-Universität Düsseldorf

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