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Teaming to Upgrade to Excellence in Environmental Biology, Ecosystem Research and AgroBiodiversity

Deliverables

1st Implementation Report

The Implementation Report is a standard deliverable which should be submitted at the time when the periodic report is submitted to the Research Executive Agency It will detail the future plans of the consortium regarding implementation of the project for the subsequent period including also ethical issues and how they will be addressed It should refer to policyrelevant key aspects of the project future actions plans of the consortium in relation to the implementation of the project This deliverable refers to the 1st year of implementation

Education and Training Strategy

Education and Training Strategy will be drafted by the CAEU in collaboration with the SC and the RUs benefiting from the best practice of UM The strategy will set the rules regarding for instance the processes of recruitment the mechanisms of supervision and mentoring of PhD students and Postdoctoral researchers and the general themes and calendar of the advanced courses

1st Report of the Education and Training Activities

1st Report of the Education and Training Activities address the Doctoral programs Post Doctoral Training Program and Advanced Training

2nd Implementation Report
3rd Implementation Report
Definition of CoE KPIs

The performance indicators identified in the application will be used as the starting point to define the Key Performance Indicators of the CoE, and its ability to achieve the identified impacts .

1st Review of the Affiliates Programme

1st Revision of the Affiliates Programme.

Strategic Research Programme

This deliverable is an update of the research strategy developed in the Business Plan, preparing a roadmap to steer the development of excellent research towards innovation. It will set up the Research Units (RU), and will create the conditions for implementing the research strategy.

Implementation Plan for Ethics and Animal Welfare Guidelines

This document reviews the best practices in the UM services CECEMA Centre dElevage et de Conditionnement Exprimental des Modles Animaux and get advice from them and will receive inputs from UM researchers involved in this component Given the research focus of the CoE particular attention will be given to the aspects regarding experiments with animals and the quality of the facilities to keep animals in captivity while complying with the three Rs strategy replacement reduction and refinement

Communication, Dissemination & Exploitation Plan

The CDE Plan main objectives are i To raise regional national and international awareness recognition and attractiveness of BIOPOLIS RI promoting its areas of excellence ii To disseminate BIOPOLISs research and innovation enabling others to use and take up results and thus maximising its impact iii To identify relevant audiences markets and business segments in order to create and foster concrete exploitation of research results and iv to contribute to fund raising and the sustainability of the CoE The Plan will detail the activities to be carried out including for instance the partner responsibilities in their implementation the calendar and the models of implementation

1st Research Funding Review

1st review of the Research Funding activities including participation in the final opportunities from H2020, in the Horizon Europe calls and future framework Programmes and accessing to Portuguese funds.

Review of the Data Management Plan including ORDP: Open Research Data Pilot

Revision and update of the Data Management Plan.

Data Management Plan including ORDP: Open Research Data Pilot

This Plan will include the provisions for making data findable, accessible, interoperable, and reusable (FAIR), and it will describe the open access policies, following the guidelines set in the H2020 Online Manual.

Publications

The Terrific Skink bite force suggests insularity as a likely driver to exceptional resource use

Author(s): Michael J. Jowers, Yuri Simone, Anthony Herrel, M. Pilar Cabezas, Raquel Xavier, Magaly Holden, Renaud Boistel, John C. Murphy, Mathieu Santin, Stephane Caut, Renoir J. Auguste, Arie van der Meijden, Franco Andreone & Ivan Ineich
Published in: Scientific Reports, 2022, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-022-08148-6

How vulnerable are bryophytes to climate change? Developing new species and community vulnerability indices

Author(s): H. Hespanhol, K. Cezón, J. Muñoz, R.G. Mateo, J. Gonçalves
Published in: Ecological Indicators, 2022, ISSN 1872-7034
Publisher: ELSEVIER
DOI: 10.1016/j.ecolind.2022.108643

Fine-scale survey of intertidal macroalgae reveals recent changes in a cold-water biogeographic stronghold

Author(s): Cátia Monteiro, Joana Pereira, Rui Seabra and Fernando P. Lima
Published in: Frontiers in Marine Science, 2022, ISSN 2296-7745
Publisher: Frontiers Media SA
DOI: 10.3389/fmars.2022.880074

The genetics of adaptation in freshwater Eurasian shad ( Alosa)

Author(s): Stephen J. Sabatino, Paulo Pereira, Miguel Carneiro, Jolita Dilytė, John Patrick Archer, Antonio Munoz, Francesco Nonnis-Marzano, Antonio Murias
Published in: Ecology and Evolution, 2022, ISSN 2045-7758
Publisher: John Wiley and Sons Ltd
DOI: 10.1002/ece3.8908

DNA Markers for Detection and Genotyping of Xanthomonas euroxanthea

Author(s): Kayla Gisela Silva,Leonor Martins,Miguel Teixeira,Joël F. Pothier and Fernando Tavares
Published in: Microorganisms, 2022, ISSN 2076-2607
Publisher: MDPI
DOI: 10.3390/microorganisms10061078

An updated herpetofauna species inventory of Iona National Park in Southwestern Angola

Author(s): Javier Lobón-Rovira, Pedro Vaz Pinto, François S. Becker, Krystal A. Tolley, John Measey, Bruce Bennet, Bastiaan Boon, Sango de Sá, Werner Conradie
Published in: Check List, 2022, ISSN 1809-127X
Publisher: Centro de Referencia em Informacao Ambiental
DOI: 10.15560/18.2.289

The evolutionary pathways for local adaptation in mountain hares

Author(s): Iwona Giska, João Pimenta, Liliana Farelo, Pierre Boursot, Klaus Hackländer, Hannes Jenny, Neil Reid, W Ian Montgomery, Paulo A Prodöhl, Paulo C Alves, José Melo-Ferreira
Published in: Molecular Ecology, 2022, ISSN 1365-294X
Publisher: John Wiley & Sons Ltd
DOI: 10.1111/mec.16338

Clarifying the taxonomy of some cryptic blennies (Blenniidae) in their native and introduced range

Author(s): M. Pilar Cabezas, Oscar M. Lasso-Alcalá, Elena Quintero-T, Raquel Xavier, Tommaso Giarrizzo, Jorge L. S. Nunes, Fabiola S. Machado, Jesús Gómez, Wellington Silva Pedroza & Michael J. Jowers
Published in: Scientific Reports, 2022, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-022-12580-z

Modelling technical and biological biases in macroinvertebrate community assessment from bulk preservative using multiple metabarcoding markers

Author(s): Filipa M. S. Martins, Miguel Porto, Maria J. Feio, Bastian Egeter, Aurélie Bonin, Sónia R. Q. Serra, Pierre Taberlet, Pedro Beja
Published in: Molecular Ecology, 2020, ISSN 0962-1083
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/mec.15620

Fine-scale abundance of rocky shore macroalgae species with distribution limits in NW Iberia in 2020/2021

Author(s): Joana Pereira, Catia Monteiro, Rui Seabra, Fernando P Lima
Published in: Biodiversity Data Journal, 2022, ISSN 1314-2828
Publisher: Pensoft Publishers Ltd
DOI: 10.3897/bdj.10.e80798

The legacy of recurrent introgression during the Radiation of Hares

Author(s): MAFALDA S. FERREIRA, MATTHEW R. JONES, COLIN M. CALLAHAN, LILIANA FARELO, ZELALEM TOLESA, FRANZ SUCHENTRUNK, PIERRE BOURSOT, L. SCOTT MILLS7, PAULO C. ALVES, JEFFREY M. GOOD, AND JOSÉ MELO-FERREIRA
Published in: Systematic Biology, 2021, ISSN 1063-5157
Publisher: Taylor & Francis
DOI: 10.1093/sysbio/syaa088

Biogeographical patterns of amphibians and reptiles in the northernmost coastal montane complex of South America

Author(s): Gilson A. Rivas,Oscar M. Lasso-Alcalá,Douglas Rodríguez-Olarte,Mayke De Freitas,John C. Murphy,Cristian Pizzigalli,John C. Weber,Laurent de Verteuil,Michael J. Jowers
Published in: PLoS One, 2021, ISSN 1932-6203
Publisher: Public Library of Science
DOI: 10.1371/journal.pone.0246829

Characterization of the oral microbiome of medicated type-2 diabetes patients

Author(s): Ana Almeida-Santos, Daniela Martins-Mendes, Magdalena Gayà-Vidal, Lucía Pérez-Pardal and Albano Beja-Pereira
Published in: Frontiers in Microbiology, 2021, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2021.610370

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