An EU-Canada joint infrastructure for next-generation multi-Study Heart research

Livrables

Final documentation module
Awareness campaigns and consensus building
Policy “Points to Consider” tool to guide research projects, policy makers

Policy Points to Consider tool to guide research projects policy makers

Integrated euCanSHare computational infrastructure
Results of target discovery study
Feedback report on assessment of platform usage
Comparative cross-mapping table detailing which participating cohorts are compliant with euCanSHare requirements

Comparative crossmapping table detailing which participating cohorts are compliant with euCanSHare requirements

Policy points regarding the incentives mechanisms for data sharing technologies
euCanSHare's dissemination events

euCanSHares dissemination events

Guidelines and protocol for data deposition
Data Access Committee Portal prototype
Data distribution protocols and interfaces
Atrial fibrillation use case in collaboration with the HealthyCloud project

In this task we will develop a machine learning pipeline for predictive modelling of atrial fibrillation by integrating imaging electrocardiography biomarkers and other phenotypic data The use case will be initially implemented with research data from the euCanSHare platform Furthermore in collaboration with the HealthyCloud project where the technical specifications for a similar use case based on health data will be gathered the work will be extended by interrogating additional datasets from clinical registries The encountered obstacles will be used to improve the final version of the euCanSHare platform as well as to support the definition of the HealthyCloud roadmap

Recommended metadata standards
Template smart contact to streamline data access and sharing process
Results of interview study with researchers regarding blockchain technology for data sharing
Results of public health study
Report on the implementation of raw data access protocols
Initial Infrastructure framework and documentation

Bioinformatics toolbox
Data quality control tool
Cardiac image analyser
Opal software integration to euCanSHare
Mica-powered catalogue populated with euCanSHare metadata

Micapowered catalogue populated with euCanSHare metadata

Machine learning toolbox
Project website

Data Management Plan v1
Data Management Plan v2

Prototype of blockchain technology

Publications

Credit and Recognition for Contributions to Data-Sharing Platforms Among Cohort Holders and Platform Developers in Europe: Interview Study.

Auteurs: Devriendt, T., Shabani, M., Borry, P.
Publié dans: Journal of Medical Internet Research, 2022, ISSN 1439-4456
Éditeur: JMIR Publications Inc.
DOI: 10.2196/25983

Variation in left ventricular cardiac magnetic resonance normal reference ranges: systematic review and meta-analysis

Auteurs: Zahra Raisi-Estabragh, Asmaa A M Kenawy, Nay Aung, Jackie Cooper, Patricia B Munroe, Nicholas C Harvey, Steffen E Petersen, Mohammed Y Khanji
Publié dans: European Heart Journal - Cardiovascular Imaging, 2021, ISSN 2047-2404
Éditeur: Oxford University Press
DOI: 10.1093/ehjci/jeaa089

Artificial Intelligence and Cardiovascular Magnetic Resonance Imaging in Myocardial Infarction Patients

Auteurs: Jun Hua Chong, Musa Abdulkareem, Steffen E. Petersen, Mohammed Y. Khanji
Publié dans: Current Problems in Cardiology, 2022, ISSN 0146-2806
Éditeur: Mosby Inc.
DOI: 10.1016/j.cpcardiol.2022.101330

New Imaging Signatures of Cardiac Alterations in Ischaemic Heart Disease and Cerebrovascular Disease Using CMR Radiomics

Auteurs: Elisa Rauseo, Cristian Izquierdo Morcillo, Zahra Raisi-Estabragh, Polyxeni Gkontra, Nay Aung, Karim Lekadir and Steffen E. Petersen
Publié dans: Frontiers in Cardiovascular Medicine, 2021, ISSN 2297-055X
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fcvm.2021.716577

Repeatability of Cardiac Magnetic Resonance Radiomics: A Multi-Centre Multi-Vendor Test-Retest Study

Auteurs: Zahra Raisi-Estabragh, Polyxeni Gkontra, Akshay Jaggi, Jackie Cooper1, João Augusto, Anish N. Bhuva, Rhodri H. Davies, Charlotte H. Manisty, James C. Moon, Patricia B. Munroe, Nicholas C. Harvey, Karim Lekadir, Steffen E. Petersen
Publié dans: Frontiers in Cardiovascular Medicine, 2020, ISSN 2297-055X
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fcvm.2020.586236

Age, sex and disease-specific associations between resting heart rate and cardiovascular mortality in the UK BIOBANK.

Auteurs: Zahra Raisi-Estabragh; Zahra Raisi-Estabragh; Jackie A. Cooper; Jackie A. Cooper; Rebekah Judge; Mohammed Y Khanji; Mohammed Y Khanji; Patricia B. Munroe; Cyrus Cooper; Cyrus Cooper; Nicholas C. Harvey; Steffen E. Petersen; Steffen E. Petersen
Publié dans: PLoS ONE, Numéro 12, 2020, ISSN 1932-6203
Éditeur: Public Library of Science
DOI: 10.1371/journal.pone.0233898

Generalizable Framework for Atrial Volume Estimation for Cardiac CT Images Using Deep Learning With Quality Control Assessment

Auteurs: Musa Abdulkareem, Mark S. Brahier, Fengwei Zou, Alexandra Taylor, Athanasios Thomaides, Peter J. Bergquist, Monvadi B. Srichai, Aaron M. Lee, Jose D. Vargas and Steffen E. Petersen
Publié dans: Frontiers in Cardiovascular Medicine, 2022, ISSN 2297-055X
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fcvm.2022.822269

Associations of Meat and Fish Consumption With Conventional and Radiomics Cardiovascular Magnetic Resonance Phenotypes in the UK Biobank

Auteurs: Zahra Raisi-Estabragh; Zahra Raisi-Estabragh; Celeste McCracken; Polyxeni Gkontra; Akshay Jaggi; Maddalena Ardissino; Jackie Cooper; Luca Biasiolli; Nay Aung; Nay Aung; Stefan K. Piechnik; Stefan Neubauer; Patricia B. Munroe; Karim Lekadir; Nicholas C. Harvey; Nicholas C. Harvey; Steffen E. Petersen; Steffen E. Petersen
Publié dans: Frontiers in Cardiovascular Medicine, Numéro 5, 2021, ISSN 2297-055X
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fcvm.2021.667849

Exploring the incremental utility of circulating biomarkers for robust risk prediction of incident atrial fibrillation in European cohorts using regressions and modern machine learning methods

Auteurs: Toprak B, Brandt S, Brederecke J, Gianfagna F, Vishram-Nielsen JKK, Ojeda FM, Costanzo S, Börschel CS, Söderberg S, Katsoularis I, Camen S, Vartiainen E, Donati MB, Kontto J, Bobak M, Mathiesen EB, Linneberg A, Koenig W, Løchen ML, Di Castelnuovo A, Blankenberg S, de Gaetano G, Kuulasmaa K, Salomaa V, Iacoviello L, Niiranen T, Zeller T, Schnabel RB.
Publié dans: EP Europace, 2023, ISSN 1099-5129
Éditeur: Oxford University Press
DOI: 10.1093/europace/euac260

Quantification of Epicardial Adipose Tissue Volume and Attenuation for Cardiac CT Scans Using Deep Learning in a Single Multi-Task Framework

Auteurs: Musa Abdulkareem, Mark S. Brahier, Fengwei Zou, Elisa Rauseo, Ijeoma Uchegbu, Alexandra Taylor, Athanasios Thomaides, Peter J. Bergquist, Monvadi B. Srichai, Aaron M. Lee, Jose D. Vargas, Steffen E Petersen
Publié dans: Reviews in Cardiovascular Medicine, 2022, ISSN 1530-6550
Éditeur: MedReviews
DOI: 10.31083/j.rcm2312412

Atrial fibrillation prediction by combining ECG markers and CMR radiomics

Auteurs: Pujadas ER, Raisi-Estabragh Z, Szabo L, Morcillo CI, Campello VM, Martin-Isla C, Vago H, Merkely B, Harvey NC, Petersen SE, Lekadir K.
Publié dans: Scientific Reports, 2022, ISSN 2045-2322
Éditeur: Nature Publishing Group
DOI: 10.1038/s41598-022-21663-w

Data Sharing in Biomedical Sciences: A Systematic Review of Incentives

Auteurs: Thijs Devriendt, Mahsa Shabani , Pascal Borry
Publié dans: Biopreservation and Biobanking, 2021, Page(s) 219-227, ISSN 1947-5535
Éditeur: Mary Ann Liebert Inc.
DOI: 10.1089/bio.2020.0037

Radiomics Signatures of Cardiovascular Risk Factors in Cardiac MRI: Results From the UK Biobank.

Auteurs: Irem Cetin; Zahra Raisi-Estabragh; Zahra Raisi-Estabragh; Steffen E. Petersen; Steffen E. Petersen; Sandy Napel; Stefan K. Piechnik; Stefan Neubauer; Miguel Ángel González Ballester; Miguel Ángel González Ballester; Oscar Camara; Karim Lekadir
Publié dans: Frontiers in Cardiovascular Medicine, Numéro 11, 2020, ISSN 2297-055X
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fcvm.2020.591368

Influence of geographical latitude on vitamin D status: cross-sectional results from the BiomarCaRE consortium

Auteurs: Oskarsson V, Eliasson M, Salomaa V, Reinikainen J, Männistö S, Palmieri L, Donfrancesco C, Sans S, Costanzo S, de Gaetano G, Iacoviello L, Veronesi G, Ferrario MM, Padro T, Thorand B, Huth C, Zeller T, Blankenberg S, Anderson AS, Tunstall-Pedoe H, Kuulasmaa K, Söderberg S; BiomarCaRE investigators.
Publié dans: British Journal of Nutrition, 2022, ISSN 0007-1145
Éditeur: CABI Publishing
DOI: 10.1017/s0007114521005080

Facilitating harmonized data quality assessments. A data quality framework for observational health research data collections with software implementations in R

Auteurs: Carsten Oliver Schmidt, Stephan Struckmann, Cornelia Enzenbach, Achim Reineke, Jürgen Stausberg, Stefan Damerow, Marianne Huebner, Börge Schmidt, Willi Sauerbrei & Adrian Richter
Publié dans: BMC Medical Research Methodology, 2021, ISSN 1471-2288
Éditeur: BioMed Central
DOI: 10.1186/s12874-021-01252-7

Data sharing platforms and the academic evaluation system.

Auteurs: Thijs Devriendt; Mahsa Shabani; Pascal Borry
Publié dans: EMBO Reports, Numéro 8, 2020, ISSN 1469-221X
Éditeur: Nature Publishing Group
DOI: 10.15252/embr.202050690

Associations of the vasoactive peptides CT-proET-1 and MR-proADM with incident type 2 diabetes: results from the BiomarCaRE Consortium

Auteurs: Sujana C, Salomaa V, Kee F, Seissler J, Jousilahti P, Neville C, Then C, Koenig W, Kuulasmaa K, Reinikainen J, Blankenberg S, Zeller T, Herder C, Mansmann U, Peters A,
Publié dans: Cardiovascular Diabetology, 2022, ISSN 1475-2840
Éditeur: BioMed Central
DOI: 10.1186/s12933-022-01513-9

Women With Diabetes Are at Increased Relative Risk of Heart Failure Compared to Men: Insights From UK Biobank

Auteurs: Sucharitha Chadalavada, Magnus T. Jensen, Nay Aung, Jackie Cooper, Karim Lekadir, Patricia B. Munroe, Steffen E. Petersen
Publié dans: Frontiers in Cardiovascular Medicine, 2021, ISSN 2297-055X
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fcvm.2021.658726

The role of obesity-related cardiovascular remodelling in mediating incident cardiovascular outcomes: a population-based observational study

Auteurs: Liliana Szabo, Celeste McCracken, Jackie Cooper, Oliver J Rider, Hajnalka Vago, Bela Merkely, Nicholas C Harvey, Stefan Neubauer, Steffen E Petersen, Zahra Raisi-Estabragh
Publié dans: European Heart Journal - Cardiovascular Imaging, 2023, ISSN 2047-2404
Éditeur: Oxford University Press
DOI: 10.1093/ehjci/jeac270

The Impact of Maternal Obesity on Offspring Cardiovascular Health: A Systematic Literature Review

Auteurs: Lois Kankowski, Maddalena Ardissino, Celeste McCracken, Adam J. Lewandowski, Paul Leeson, Stefan Neubauer, Nicholas C. Harvey, Steffen E. Petersen and Zahra Raisi-Estabragh
Publié dans: Frontiers in Endocrinology, 2022, ISSN 1664-2392
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fendo.2022.868441

Differential Diagnosis and Molecular Stratification of Gastrointestinal Stromal Tumors on CT Images Using a Radiomics Approach

Auteurs: Martijn P. A. Starmans, Milea J. M. Timbergen, Melissa Vos, Michel Renckens, Dirk J. Grünhagen, Geert J. L. H. van Leenders, Roy S. Dwarkasing, François E. J. A. Willemssen, Wiro J. Niessen, Cornelis Verhoef, Stefan Sleijfer, Jacob J. Visser, Stefan Klein
Publié dans: Journal of Digital Imaging, 2022, ISSN 1618-727X
Éditeur: Springer New York
DOI: 10.1007/s10278-022-00590-2

Clinician's guide to trustworthy and responsible artificial intelligence in cardiovascular imaging

Auteurs: Liliana Szabo, Zahra Raisi-Estabragh, Ahmed Salih, Celeste McCracken, Esmeralda Ruiz Pujadas, Polyxeni Gkontra, Mate Kiss, Pal Maurovich-Horvath, Hajnalka Vago, Bela Merkely, Aaron M. Lee, Karim Lekadir and Steffen E. Petersen
Publié dans: Frontiers in Cardiovascular Medicine, 2022, ISSN 2297-055X
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fcvm.2022.1016032

Diabetes and heart failure associations in women and men: Results from the MORGAM consortium

Auteurs: Chadalavada S, Reinikainen J, Andersson J, Di Castelnuovo A, Iacoviello L, Jousilahti P, Kårhus LL, Linneberg A, Söderberg S, Tunstall-Pedoe H, Lekadir K, Aung N, Jensen MT, Kuulasmaa K, Niiranen TJ, Petersen SE.
Publié dans: Frontiers in Cardiovascular Medicine, 2023, ISSN 2297-055X
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fcvm.2023.1136764

Cardiovascular disease and mortality sequelae of COVID-19 in the UK Biobank.

Auteurs: Zahra Raisi-Estabragh; Jackie Cooper; Ahmed Salih; Betty Raman; Aaron Mark Lee; Stefan Neubauer; Nicholas C. Harvey; Steffen E. Petersen
Publié dans: Heart, 2023, ISSN 1355-6037
Éditeur: BMJ Publishing Group
DOI: 10.1136/heartjnl-2022-321492

Poor Bone Quality is Associated With Greater Arterial Stiffness: Insights From the UK Biobank.

Auteurs: Zahra Raisi-Estabragh; Zahra Raisi-Estabragh; Luca Biasiolli; Jackie A. Cooper; Jackie A. Cooper; Nay Aung; Nay Aung; Kenneth Fung; Kenneth Fung; José Miguel Paiva; Mihir M. Sanghvi; Mihir M. Sanghvi; Ross J. Thomson; Elizabeth M Curtis; Julien Paccou; Jennifer J Rayner; Konrad Werys; Henrike Puchta; Katharine E Thomas; Aaron M. Lee; Stefan K. Piechnik; Stefan Neubauer; Patricia B. Munroe; Cyrus
Publié dans: Journal of Bone and Mineral Research, Numéro 6, 2020, ISSN 0884-0431
Éditeur: American Society for Bone and Mineral Research
DOI: 10.1002/jbmr.4164

Lower birth weight is linked to poorer cardiovascular health in middle-aged population-based adults

Auteurs: Zahra Raisi-Estabragh; Jackie Cooper; Mae S Bethell; Celeste McCracken; Adam J Lewandowski; Paul Leeson; Stefan Neubauer; Nicholas C Harvey; Steffen E Petersen
Publié dans: Heart, 2023, ISSN 1355-6037
Éditeur: BMJ Publishing Group
DOI: 10.1136/heartjnl-2022-321733

Incident Clinical and Mortality Associations of Myocardial Native T1 in the UK Biobank

Auteurs: Zahra Raisi-Estabragh, Celeste McCracken, Evan Hann, Dorina-Gabriela Condurache, Nicholas C. Harvey, Patricia B. Munroe, Vanessa M. Ferreira, Stefan Neubauer, Stefan K. Piechnik, and Steffen E. Petersen
Publié dans: JACC: Cardiovascular Imaging, 2023, ISSN 1936-878X
Éditeur: Elsevier BV
DOI: 10.1016/j.jcmg.2022.06.011

Multi-Centre, Multi-Vendor and Multi-Disease Cardiac Segmentation: The M&Ms Challenge

Auteurs: Victor M. Campello; Polyxeni Gkontra; Cristian Izquierdo; Carlos Martin-Isla; Alireza Sojoudi; Peter M. Full; Klaus Maier-Hein; Yao Zhang; Zhiqiang He; Jun Ma; Mario Parreno; Alberto Albiol; Fanwei Kong; Shawn C. Shadden; Jorge Corral Acero; Vaanathi Sundaresan; Mina Saber; Mustafa Elattar; Hongwei Li; Bjoern Menze; Firas Khader; Christoph Haarburger; Cian M. Scannell; Mitko Veta; Adam Carscadden;
Publié dans: IEEE Transactions on Medical Imaging, Numéro 12, 2021, ISSN 0278-0062
Éditeur: Institute of Electrical and Electronics Engineers
DOI: 10.1109/tmi.2021.3090082

Fairness in Cardiac Magnetic Resonance Imaging: Assessing Sex and Racial Bias in Deep Learning-Based Segmentation

Auteurs: Esther Puyol-Antón, Bram Ruijsink, Jorge Mariscal Harana, Stefan K. Piechnik, Stefan Neubauer, Steffen E. Petersen, Reza Razavi, Phil Chowienczyk and Andrew P. King
Publié dans: Frontiers in Cardiovascular Medicine, 2022, ISSN 2297-055X
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fcvm.2022.859310

Radiomics-Based Classification of Left Ventricular Non-compaction, Hypertrophic Cardiomyopathy, and Dilated Cardiomyopathy in Cardiovascular Magnetic Resonance

Auteurs: Cristian Izquierdo, Guillem Casas, Carlos Martin-Isla, Victor M. Campello, Andrea Guala, Polyxeni Gkontra, Jose F. Rodríguez-Palomares, Karim Lekadir
Publié dans: Frontiers in Cardiovascular Medicine, 2021, ISSN 2297-055X
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fcvm.2021.764312

Prediction of incident cardiovascular events using machine learning and CMR radiomics

Auteurs: Pujadas ER, Raisi-Estabragh Z, Szabo L, McCracken C, Morcillo CI, Campello VM, Martín-Isla C, Atehortua AM, Vago H, Merkely B, Maurovich-Horvat P, Harvey NC, Neubauer S, Petersen SE, Lekadir K.
Publié dans: European Radiology, 2023, ISSN 0938-7994
Éditeur: Springer Verlag
DOI: 10.1007/s00330-022-09323-z

Artificial Intelligence Will Transform Cardiac Imaging-Opportunities and Challenges

Auteurs: Steffen E. Petersen; Steffen E. Petersen; Musa Abdulkareem; Musa Abdulkareem; Tim Leiner
Publié dans: Frontiers in Cardiovascular Medicine, Numéro 11, 2019, ISSN 2297-055X
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fcvm.2019.00133

Diabetes status-related differences in risk factors and mediators of heart failure in the general population: results from the MORGAM/BiomarCaRE consortium

Auteurs: Vuori MA, Reinikainen J, Söderberg S, Bergdahl E, Jousilahti P, Tunstall- Pedoe H, Zeller T, Westermann D, Sans S, Linneberg A, Iacoviello L, Costanzo S, Salomaa V, Blankenberg S, Kuulasmaa K, Niiranen TJ.
Publié dans: Cardiovascular Diabetology, 2021, ISSN 1475-2840
Éditeur: BioMed Central
DOI: 10.1186/s12933-021-01378-4

SCORE2 risk prediction algorithms: new models to estimate 10-year risk of cardiovascular disease in Europe

Auteurs: SCORE2 working group and ESC Cardiovascular risk collaboration
Publié dans: European Heart Journal, 2021, ISSN 0195-668X
Éditeur: Oxford University Press
DOI: 10.1093/eurheartj/ehab309

Adverse cardiovascular magnetic resonance phenotypes are associated with greater likelihood of incident coronavirus disease 2019: findings from the UK Biobank

Auteurs: Zahra Raisi-Estabragh; Celeste McCracken; Jackie Cooper; Kenneth Fung; José M. Paiva; Mohammed Y. Khanji; Elisa Rauseo; Luca Biasiolli; Betty Raman; Stefan K. Piechnik; Stefan Neubauer; Patricia B. Munroe; Nicholas C. Harvey; Steffen E. Petersen
Publié dans: Crossref, Numéro 7, 2021, ISSN 1594-0667
Éditeur: Springer Verlag
DOI: 10.1007/s40520-021-01808-z

Association of glycated hemoglobin A1c levels with cardiovascular outcomes in the general population: results from the BiomarCaRE (Biomarker for Cardiovascular Risk Assessment in Europe) consortium

Auteurs: Sinning C, Makarova N, Völzke H, Schnabel RB, Ojeda F, Dörr M, Felix SB, Koenig W, Peters A, Rathmann W, Schöttker B, Brenner H, Veronesi G, Cesana G, Brambilla P, Palosaari T, Kuulasmaa K, Njølstad I, Mathiesen EB, Wilsgaard T, Blankenberg S, Söderberg S, Ferrario MM, Thorand B.
Publié dans: Cardiovascular Diabetology, 2021, ISSN 1475-2840
Éditeur: BioMed Central
DOI: 10.1186/s12933-021-01413-4

Incident cardiovascular events and imaging phenotypes in UK Biobank participants with past cancer

Auteurs: Zahra Raisi-Estabragh; Jackie Cooper; Celeste McCracken; Emma J Crosbie; Fiona M Walter; Charlotte H Manisty; John Robson; Mamas A Mamas; Nicholas C Harvey; Stefan Neubauer; Steffen E Petersen
Publié dans: Heart, 2023, ISSN 1468-201X
Éditeur: BMJ Publishing Group
DOI: 10.1136/heartjnl-2022-321888

Optimization of Preoperative Lymph Node Staging in Patients with Muscle-Invasive Bladder Cancer Using Radiomics on Computed Tomography

Auteurs: Martijn P. A. Starmans, Li Shen Ho, Fokko Smits, Nick Beije, Inge de Kruijff, Joep J. de Jong, Diederik M. Somford, Egbert R. Boevé, Ed te Slaa, Evelyne C. C. Cauberg, Sjoerd Klaver, Antoine G. van der Heijden, Carl J. Wijburg, Addy C. M. van de Luijtgaarden, Harm H. E. van Melick, Ella Cauffman, Peter de Vries, Rens Jacobs, Wiro J. Niessen, Jacob J. Visser, Stefan Klein, Joost L. Boormans, Astri
Publié dans: Journal of Personalized Medicine, 2022, ISSN 2075-4426
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/jpm12050726

Left atrial structure and function are associated with cardiovascular outcomes independent of left ventricular measures: a UK Biobank CMR study

Auteurs: Zahra Raisi-Estabragh, Celeste McCracken, Dorina Condurache, Nay Aung, Jose D Vargas, Hafiz Naderi, Patricia B Munroe, Stefan Neubauer, Nicholas C Harvey, Steffen E Petersen Author
Publié dans: European Heart Journal - Cardiovascular Imaging, 2022, ISSN 2047-2404
Éditeur: Oxford University Press
DOI: 10.1093/ehjci/jeab266

Risk prediction of atrial fibrillation and its complications in the community using hs troponin I

Auteurs: Börschel CS, Geelhoed B, Niiranen T, Camen S, Donati MB, Havulinna AS, Gianfagna F, Palosaari T, Jousilahti P, Kontto J, Vartiainen E, Ojeda FM, den Ruijter HM, Costanzo S, de Gaetano G, Di Castelnuovo A, Linneberg A, Vishram- Nielsen JK, Løchen ML, Koenig W, Jørgensen T, Kuulasmaa K, Blankenberg S, Iacoviello L, Zeller T, Söderberg S, Salomaa V, Schnabel RB.
Publié dans: European Journal of Clinical Investigation, 2023, ISSN 0014-2972
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/eci.13950

Rationale and Design of the Hamburg City Health Study

Auteurs: Annika Jagodzinski, Christoffer Johansen, Uwe Koch-Gromus, Ghazal Aarabi, Gerhard Adam, Sven Anders, Matthias Augustin, Ramona B. der Kellen, Thomas Beikler, Christian-Alexander Behrendt, Christian S. Betz, Carsten Bokemeyer, Katrin Borof, Peer Briken, Chia-Jung Busch, Christian Büchel, Stefanie Brassen, Eike S. Debus, Larissa Eggers, Jens Fiehler, Jürgen Gallinat, Simone Gellißen, Christian Ge
Publié dans: European Journal of Epidemiology, 2019, ISSN 0393-2990
Éditeur: Kluwer Academic Publishers
DOI: 10.1007/s10654-019-00577-4

Natriuretic Peptides and Risk of Type 2 Diabetes: Results From the Biomarkers for Cardiovascular Risk Assessment in Europe (BiomarCaRE) Consortium

Auteurs: Sujana C, Salomaa V, Kee F, Costanzo S, Söderberg S, Jordan J, Jousilahti P, Neville C, Iacoviello L, Oskarsson V, Westermann D, Koenig W, Kuulasmaa K, Reinikainen J, Blankenberg S, Zeller T, Herder C, Mansmann U, Peters A, Thorand B; BiomarCaRE Consortium.
Publié dans: Diabetes Care, 2021, ISSN 1935-5548
Éditeur: American Diabetes Association Inc.
DOI: 10.2337/dc21-0811

Characterization of p38α autophosphorylation inhibitors that target the non-canonical activation pathway

Auteurs: Lorena González, Lucía Díaz, Joan Pous, Blazej Baginski, Anna Duran-Corbera, Margherita Scarpa, Isabelle Brun-Heath, Ana Igea, Pau Martin-Malpartida, Lidia Ruiz, Chiara Pallara, Mauricio Esguerra, Francesco Colizzi, Cristina Mayor-Ruiz, Ricardo M. Biondi, Robert Soliva, Maria J. Macias, Modesto Orozco & Angel R. Nebreda
Publié dans: Nature Communications, 2023, ISSN 2041-1723
Éditeur: Nature Publishing Group
DOI: 10.1038/s41467-023-39051-x

Characterizing the hypertensive cardiovascular phenotype in the UK Biobank

Auteurs: Hussein Elghazaly, Celeste McCracken, Liliana Szabo, James Malcolmson, Charlotte H Manisty, Alun H Davies, Stefan K Piechnik, Nicholas C Harvey, Stefan Neubauer, Saidi A Mohiddin, Steffen E Petersen, Zahra Raisi-Estabragh
Publié dans: European Heart Journal - Cardiovascular Imaging, 2023, ISSN 2047-2404
Éditeur: Oxford University Press
DOI: 10.1093/ehjci/jead123

Factors that influence data sharing through data sharing platforms: A qualitative study on the views and experiences of cohort holders and platform developers

Auteurs: Thijs Devriendt; Pascal Borry; Mahsa Shabani
Publié dans: PLoS ONE, Numéro 5, 2021, ISSN 1932-6203
Éditeur: Public Library of Science
DOI: 10.1371/journal.pone.0254202

Recording the ethical provenance of data and automating data stewardship

Auteurs: Alexander Bernier, Maili Raven-Adams, Davide Zaccagnini, Bartha M. Knoppers
Publié dans: Big Data and Society, 2023, ISSN 2053-9517
Éditeur: SAGE Publications Ltd
DOI: 10.1177/20539517231163174

Cardiac Magnetic Resonance Radiomics Reveal Differential Impact of Sex, Age, and Vascular Risk Factors on Cardiac Structure and Myocardial Tissue

Auteurs: Zahra Raisi-Estabragh, Akshay Jaggi, Polyxeni Gkontra, Celeste McCracken, Nay Aung, Patricia B. Munroe, Stefan Neubauer, Nicholas C. Harvey, Karim Lekadir and Steffen E. Petersen
Publié dans: Frontiers in Cardiovascular Medicine, 2021, ISSN 2297-055X
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fcvm.2021.763361

Towards better governance of human genomic data

Auteurs: Kieran C. O’Doherty, Mahsa Shabani, Edward S. Dove, Heidi Beate Bentzen, Pascal Borry, Michael M. Burgess, Don Chalmers, Jantina De Vries, Lisa Eckstein, Stephanie M. Fullerton, Eric Juengst, Kazuto Kato, Jane Kaye, Bartha Maria Knoppers, Barbara A. Koenig, Spero M. Manson, Kimberlyn M. McGrail, Amy L. McGuire, Eric M. Meslin, Dianne Nicol, Barbara Prainsack, Sharon F. Terry, Adrian Thorogood, W
Publié dans: Nature Genetics, 2021, ISSN 1061-4036
Éditeur: Nature Publishing Group
DOI: 10.1038/s41588-020-00742-6

Cardiac aging synthesis from cross-sectional data with conditional generative adversarial networks

Auteurs: Víctor M. Campello, Tian Xia, Xiao Liu, Pedro Sanchez, Carlos Martín-Isla, Steffen E. Petersen, Santi Seguí, Sotirios A. Tsaftaris and Karim Lekadir.
Publié dans: Frontiers in Cardiovascular Medicine, 2022, ISSN 2297-055X
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fcvm.2022.983091

Estimation of biological heart age using cardiovascular magnetic resonance radiomics

Auteurs: Zahra Raisi-Estabragh, Ahmed Salih, Polyxeni Gkontra, Angélica Atehortúa, Petia Radeva, Ilaria Boscolo Galazzo, Gloria Menegaz, Nicholas C. Harvey, Karim Lekadir & Steffen E. Petersen
Publié dans: Scientific Reports, 2022, ISSN 2045-2322
Éditeur: Nature Publishing Group
DOI: 10.1038/s41598-022-16639-9

Improving robustness of automatic cardiac function quantification from cine magnetic resonance imaging using synthetic image data

Auteurs: Bogdan A. Gheorghiță, Lucian M. Itu, Puneet Sharma, Constantin Suciu, Jens Wetzl, Christian Geppert, Mohamed Ali Asik Ali, Aaron M. Lee, Stefan K. Piechnik, Stefan Neubauer, Steffen E. Petersen, Jeanette Schulz-Menger & Teodora Chițiboi
Publié dans: Scientific Reports, 2022, ISSN 2045-2322
Éditeur: Nature Publishing Group
DOI: 10.1038/s41598-022-06315-3

Pericardial adiposity is independently linked to adverse cardiovascular phenotypes: a CMR study of 42 598 UK Biobank participants

Auteurs: Maddalena Ardissino, Celeste McCracken, Andrew Bard, Charalambos Antoniades, Stefan Neubauer, Nicholas C Harvey, Steffen E Petersen, Zahra Raisi-Estabragh
Publié dans: European Heart Journal - Cardiovascular Imaging, 2022, ISSN 2047-2404
Éditeur: Oxford University Press
DOI: 10.1093/ehjci/jeac101

dataquieR: assessment of data quality in epidemiological research

Auteurs: Adrian Richter, Carsten Oliver Schmidt, Markus Krüger, Stephan Struckmann
Publié dans: Journal of Open Source Softwar, 2021, ISSN 1942-3926
Éditeur: IGI Global Publishing
DOI: 10.21105/joss.03093

Domain generalization in deep learning for contrast-enhanced imaging

Auteurs: Carla Sendra-Balcells, Víctor M. Campello, Carlos Martín-Isla, David Viladés, Martín L. Descalzo, Andrea Guala, José F. Rodríguez-Palomares, Karim Lekadir
Publié dans: Computers in Biology and Medicine, 2022, ISSN 1879-0534
Éditeur: Elsevier Ltd.
DOI: 10.1016/j.compbiomed.2022.106052

Privacy-Preserving Linkage of Genomic and Clinical Data Sets

Auteurs: Dixie B. Baker, Bartha M. Knoppers, Mark Phillips, David van Enckevort, Petra Kaufmann, Hanns Lochmuller, Domenica Taruscio
Publié dans: IEEE/ACM Transactions on Computational Biology and Bioinformatics, Numéro 16/4, 2019, Page(s) 1342-1348, ISSN 1545-5963
Éditeur: IEEE Computer Society
DOI: 10.1109/tcbb.2018.2855125

Model consent clauses for rare disease research

Auteurs: Minh Thu Nguyen, Jack Goldblatt, Rosario Isasi, Marlene Jagut, Anneliene Hechtelt Jonker, Petra Kaufmann, Laetitia Ouillade, Fruszina Molnar-Gabor, Mahsa Shabani, Eric Sid, Anne Marie Tassé, Durhane Wong-Rieger, Bartha Maria Knoppers
Publié dans: BMC Medical Ethics, Numéro 20/1, 2019, ISSN 1472-6939
Éditeur: BioMed Central
DOI: 10.1186/s12910-019-0390-x

Image-Based Cardiac Diagnosis With Machine Learning: A Review

Auteurs: Carlos Martin-Isla, Victor M. Campello, Cristian Izquierdo, Zahra Raisi-Estabragh, Bettina Baeßler, Steffen E. Petersen, Karim Lekadir
Publié dans: Frontiers in Cardiovascular Medicine, Numéro 7, 2020, ISSN 2297-055X
Éditeur: Springer
DOI: 10.3389/fcvm.2020.00001

Reward systems for cohort data sharing: An interview study with funding agencies

Auteurs: Devriendt, T., Shabani, M., Borry, P.
Publié dans: PLoS ONE, 2023, ISSN 1932-6203
Éditeur: Public Library of Science
DOI: 10.1371/journal.pone.0282969

Age-specific atrial fibrillation incidence, attributable risk factors and risk of stroke and mortality : Results from the MORGAM Consortium

Auteurs: Bente Morseth; Bastiaan Geelhoed; Allan Linneberg; Lars Johansson; Kari Kuulasmaa; Veikko Salomaa; Licia Iacoviello; Simona Costanzo; Stefan Söderberg; Teemu J Niiranen; Julie K K Vishram-Nielsen; Inger Njølstad; Tom Wilsgaard; Ellisiv B Mathiesen; Maja-Lisa Løchen; Tanja Zeller; Stefan Blankenberg; Francisco M Ojeda; Renate B Schnabel
Publié dans: Open Heart, Vol 8, Iss 2 (2021), Numéro 13, 2021, ISSN 2053-3624
Éditeur: BMJ Publishing Group
DOI: 10.1136/openhrt-2021-001624

Implementation of Electronic Informed Consent in Biomedical Research and Stakeholders' Perspectives: Systematic Review.

Auteurs: Evelien De Sutter; Drieda Zaçe; Stefania Boccia; Maria Luisa Di Pietro; David Geerts; Pascal Borry; Isabelle Huys
Publié dans: Journal of Medical Internet Research, Numéro 3, 2020, ISSN 1438-8871
Éditeur: Journal of medical Internet Research
DOI: 10.2196/19129

Risk factors, subsequent disease onset, and prognostic impact of myocardial infarction and atrial fibrillation.

Auteurs: Camen S, Csengeri D, Geelhoed B, Niiranen T, Gianfagna F, Vishram-Nielsen JK, Costanzo S, Söderberg S, Vartiainen E, Börschel CS, Donati MB, Løchen ML, Ojeda FM, Kontto J, Mathiesen EB, Jensen S, Koenig W, Kee F, de Gaetano G, Zeller T, Jørgensen T, Tunstall-Pedoe H, Blankenberg S, Kuulasmaa K, Linneberg A, Salomaa V, Iacoviello L, Schnabel RB.
Publié dans: Journal of the American Heart Association, 2022, ISSN 2047-9980
Éditeur: Wiley-Blackwell
DOI: 10.1161/jaha.121.024299

Genome-Wide Analysis of Left Ventricular Maximum Wall Thickness in the UK Biobank Cohort Reveals a Shared Genetic Background With Hypertrophic Cardiomyopathy

Auteurs: Nay Aung; Luis R. Lopes; Stefan van Duijvenboden; Andrew R. Harper; Anuj Goel; Christopher Grace; Carolyn Y. Ho; William S. Weintraub; Christopher M. Kramer; Stefan Neubauer; Hugh C. Watkins; Steffen E. Petersen; Patricia B. Munroe
Publié dans: Circulation: Genomic and Precision Medicine, 2023, ISSN 2574-8300
Éditeur: Lippincott Williams and Wilkins Ltd.
DOI: 10.1161/circgen.122.003716

Cardiac magnetic resonance radiomics: basic principles and clinical perspectives.

Auteurs: Zahra Raisi-Estabragh; Zahra Raisi-Estabragh; Cristian Izquierdo; Víctor M. Campello; Carlos Martín-Isla; Akshay Jaggi; Nicholas C. Harvey; Nicholas C. Harvey; Karim Lekadir; Steffen E. Petersen; Steffen E. Petersen
Publié dans: European Heart Journal Cardiovascular Imaging, Numéro 11, 2020, ISSN 2047-2404
Éditeur: Oxford University Press
DOI: 10.1093/ehjci/jeaa028

Bridging the European Data Sharing Divide in Genomic Science

Auteurs: Fruzsina Molnár-Gábor, Michael J S Beauvais, Alexander Bernier, Maria Pilar Nicolas Jimenez, Mikel Recuero, Bartha Maria Knoppers
Publié dans: Journal of Medical Internet Research, 2022, ISSN 1438-8871
Éditeur: Journal of medical Internet Research
DOI: 10.2196/37236

Multi-organ imaging demonstrates the heart-brain-liver axis in UK Biobank participants

Auteurs: Celeste McCracken, Zahra Raisi-Estabragh, Michele Veldsman, Betty Raman, Andrea Dennis, Masud Husain, Thomas E. Nichols, Steffen E. Petersen & Stefan Neubauer
Publié dans: Nature Communications, 2022, ISSN 2041-1723
Éditeur: Nature Publishing Group
DOI: 10.1038/s41467-022-35321-2

Reconciling the biomedical data commons and the GDPR: three lessons from the EUCAN ELSI collaboratory

Auteurs: Alexander Bernier, Fruzsina Molnár-Gábor, Bartha M. Knoppers, Pascal Borry, Priscilla M. D. G. Cesar, Thijs Devriendt, Melanie Goisauf, Madeleine Murtagh, Pilar Nicolás Jiménez, Mikel Recuero, Emmanuelle Rial-Sebbag, Mahsa Shabani, Rebecca C. Wilson, Davide Zaccagnini & Lauren Maxwell
Publié dans: European Journal of Human Genetics, 2023, ISSN 1018-4813
Éditeur: Natue Publishing Group
DOI: 10.1038/s41431-023-01403-y

Simple cardiovascular risk stratification by replacing total serum cholesterol with anthropometric measures: The MORGAM prospective cohort project

Auteurs: Rosberg V, Vishram-Nielsen JK, Kristensen AMD, Pareek M, Sehested TSG, Nilsson PM, Linneberg A, Palmieri L, Giampaoli S, Donfrancesco C, Kee F, Mancia G, Cesana G, Veronesi G, Grassi G, Kuulasmaa K, Salomaa V, Palosaari T, Sans S, Ferrieres J, Dallongeville J, Söderberg S, Moitry M, Drygas W, Tamosiunas A, Peters A, Brenner H, Schöttker B, Grimsgaard S, Biering-Sørensen T, Olsen MH.
Publié dans: Preventive Medicine Reports, 2022, ISSN 2211-3355
Éditeur: Elsevier BV
DOI: 10.1016/j.pmedr.2022.101700

Predicting post-contrast information from contrast agent free cardiac MRI using machine learning: Challenges and methods

Auteurs: Musa Abdulkareem, Asmaa A. Kenawy, Elisa Rauseo, Aaron M. Lee, Alireza Sojoudi, Alborz Amir-Khalili, Karim Lekadir, Alistair A. Young, Michael R. Barnes, Philipp Barckow4, Mohammed Y. Khanji, Nay Aung and Steffen E. Petersen
Publié dans: Frontiers in Cardiovascular Medicine, 2022, ISSN 2297-055X
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fcvm.2022.894503

Chronic kidney disease and risk of atrial fibrillation and heart failure in general population-based cohorts: the BiomarCaRE project

Auteurs: Rehm M, Rothenbacher D, Iacoviello L, Costanzo S, Tunstall-Pedoe H, Fitton CA, Söderberg S, Hultdin J, Salomaa V, Jousilahti P, Palosaari T, Kuulasmaa K, Waldeyer C, Schnabel RB, Zeller T, Blankenberg S, Koenig W; BiomarCaRE Consortium.
Publié dans: ESC Heart Failure, 2022, ISSN 2055-5822
Éditeur: The Heart Failure Association of the European Society of Cardiology
DOI: 10.1002/ehf2.13699

Mitral Annular Disjunction Assessed Using CMR Imaging: Insights From the UK Biobank Population Study

Auteurs: Dasa Zugwitz, Kenneth Fung, Nay Aung, Elisa Rauseo, Celeste McCracken, Jackie Cooper, Saloua El Messaoudi, Robert H. Anderson, Stefan K. Piechnik, Stefan Neubauer, Steffen E. Petersen, and Robin Nijveldt
Publié dans: JACC: Cardiovascular Imaging, 2022, ISSN 1936-878X
Éditeur: Elsevier BV
DOI: 10.1016/j.jcmg.2022.07.015

Policies to regulate data sharing of cohorts via data infrastructures: An interview study with funding agencies.

Auteurs: Devriendt, T., Shabani, M., Borry, P.
Publié dans: International Journal of Medical Informatics, 2022, ISSN 1872-8243
Éditeur: Elsevier Ireland Ltd
DOI: 10.1016/j.ijmedinf.2022.104900

R Packages for Data Quality Assessments and Data Monitoring: A Software Scoping Review with Recommendations for Future Developments

Auteurs: Joany Mariño, Elisa Kasbohm, Stephan Struckmann, Lorenz A. Kapsner, Carsten O. Schmidt.
Publié dans: Applied Sciences, 2022, ISSN 2076-3417
Éditeur: MDPI
DOI: 10.3390/app12094238

Minimising multi-centre radiomics variability through image normalisation: a pilot study

Auteurs: Víctor M. Campello, Carlos Martín-Isla, Cristian Izquierdo, Andrea Guala, José F. Rodríguez Palomares, David Viladés, Martín L. Descalzo, Mahir Karakas, Ersin Çavuş, Zahra Raisi-Estabragh, Steffen E. Petersen, Sergio Escalera, Santi Seguí & Karim Lekadir
Publié dans: Scientific Reports, 2022, ISSN 2045-2322
Éditeur: Nature Publishing Group
DOI: 10.1038/s41598-022-16375-0

Inflammatory proteomics profiling for prediction of incident atrial fibrillation

Auteurs: Christin S Börschel; Alfredo Ortega-Alonso; Aki S Havulinna; Pekka Jousilahti; Marko Salmi; Sirpa Jalkanen; Salomaa Veikko; Teemu Niiranen; Renate B Schnabel
Publié dans: Heart, 2023, ISSN 1355-6037
Éditeur: BMJ Publishing Group
DOI: 10.1136/heartjnl-2022-321959

The European Genome-phenome Archive in 2021

Auteurs: Mallory Ann Freeberg, Lauren A Fromont, Teresa D’Altri, Anna Foix Romero, Jorge Izquierdo Ciges, Aina Jene, Giselle Kerry, Mauricio Moldes, Roberto Ariosa, Silvia Bahena, Daniel Barrowdale, Marcos Casado Barbero, Dietmar Fernandez-Orth, Carles Garcia-Linares, Emilio Garcia-Rios, Frédéric Haziza, Bela Juhasz, Oscar Martinez Llobet, Gemma Milla, Anand Mohan, Manuel Rueda, Aravind Sankar, Dona Sh
Publié dans: Nucleic Acids Research, 2022, ISSN 0305-1048
Éditeur: Oxford University Press
DOI: 10.1093/nar/gkab1059

Data sharing platforms: instruments to inform and shape science policy on data sharing?

Auteurs: Devriendt, T., Shabani, M., Lekadir, K., Borry, P.
Publié dans: Scientometrics, 2022, ISSN 1588-2861
Éditeur: Akademiai Kiado
DOI: 10.1007/s11192-022-04361-2

Sex-based differences in risk factors for incident myocardial infarction and stroke in the UK Biobank

Auteurs: Elizabeth Remfry, Maddalena Ardissino, Celeste McCracken, Liliana Szabo, Stefan Neubauer, Nicholas C Harvey, Mamas A Mamas, John Robson, Steffen E Petersen, Zahra Raisi-Estabragh
Publié dans: European Heart Journal - Quality of Care and Clinical Outcomes, 2023, ISSN 2058-5225
Éditeur: Oxford University Press
DOI: 10.1093/ehjqcco/qcad029

Attri-VAE: Attribute-based interpretable representations of medical images with variational autoencoders

Auteurs: Irem Cetin; Maialen Stephens; Oscar Camara; Miguel A. González Ballester
Publié dans: Computerized Medical Imaging and Graphics, Numéro 12, 2023, ISSN 0895-6111
Éditeur: Elsevier BV
DOI: 10.1016/j.compmedimag.2022.102158

Image-Based Biological Heart Age Estimation Reveals Differential Aging Patterns Across Cardiac Chambers

Auteurs: Ahmed M Salih, Esmeralda Ruiz Pujadas, Víctor M Campello, Celeste McCracken, Nicholas C Harvey, Stefan Neubauer, Karim Lekadir, Thomas E Nichols, Steffen E Petersen, Zahra Raisi-Estabragh
Publié dans: Journal of Magnetic Resonance Imaging, 2023, ISSN 1053-1807
Éditeur: John Wiley & Sons Inc.
DOI: 10.1002/jmri.28675

Cardiovascular magnetic resonance imaging in the UK Biobank: a major international health research resource

Auteurs: Zahra Raisi-Estabragh, Nicholas C Harvey, Stefan Neubauer, and Steffen E Petersen
Publié dans: European Heart Journal Cardiovascular Imaging, 2020, ISSN 2047-2404
Éditeur: Oxford University Press
DOI: 10.1093/ehjci/jeaa297

Predicting left ventricular hypertrophy from the 12-lead electrocardiogram in the UK Biobank imaging study using machine learning

Auteurs: Hafiz Naderi, Julia Ramírez, Stefan van Duijvenboden, Esmeralda Ruiz Pujadas, Nay Aung, Lin Wang, Choudhary Anwar Ahmed Chahal, Karim Lekadir, Steffen E Petersen, Patricia B Munroe
Publié dans: European Heart Journal - Digital Health, 2023, ISSN 0195-668X
Éditeur: Oxford University Press
DOI: 10.1093/ehjdh/ztad037

A population-based phenome-wide association study of cardiac and aortic structure and function

Auteurs: Wenjia Bai; Hideaki Suzuki; Hideaki Suzuki; Jian Huang; Catherine Francis; Shuo Wang; Giacomo Tarroni; Giacomo Tarroni; Florian Guitton; Nay Aung; Kenneth Fung; Steffen E. Petersen; Stefan K. Piechnik; Stefan Neubauer; Evangelos Evangelou; Evangelos Evangelou; Abbas Dehghan; Declan P. O'Regan; Martin R. Wilkins; Yike Guo; Paul M. Matthews; Daniel Rueckert
Publié dans: Nature Medicine, Numéro 9, 2020, ISSN 1078-8956
Éditeur: Nature Publishing Group
DOI: 10.1038/s41591-020-1009-y

Left Ventricular Hypertrabeculation Is Not Associated With Cardiovascular Morbity or Mortality: Insights From the Eurocmr Registry

Auteurs: Filip Zemrak, Zahra Raisi-Estabragh, Mohammed Y. Khanji, Saidi A. Mohiddin, Oliver Bruder, Anja Wagner, Massimo Lombardi, Juerg Schwitter, Albert C. van Rossum, Günter Pilz, Detlev Nothnagel, Henning Steen, Eike Nagel, Sanjay K. Prasad, Christina C. Deluigi, Thorsten Dill, Herbert Frank, Steffen Schneider, Heiko Mahrholdt, Steffen E. Petersen
Publié dans: Frontiers in Cardiovascular Medicine, 2020, ISSN 2297-055X
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fcvm.2020.00158

Generalisability of fetal ultrasound deep learning models to low-resource imaging settings in five African countries

Auteurs: Carla Sendra-Balcells; Víctor M. Campello; Jordina Torrents-Barrena; Yahya Ali Ahmed; Mustafa Elattar; Benard Ohene-Botwe; Pempho Nyangulu; William Stones; Mohammed Ammar; Lamya Nawal Benamer; Harriet Nalubega Kisembo; Senai Goitom Sereke; Sikolia Z. Wanyonyi; Marleen Temmerman; Eduard Gratacós; Elisenda Bonet; Elisenda Eixarch; Kamil Mikolaj; Martin Grønnebæk Tolsgaard; Karim Lekadir
Publié dans: Scientific Reports, 2023, ISSN 2045-2322
Éditeur: Nature Publishing Group
DOI: 10.1038/s41598-023-29490-3

Conducting an Epidemiologic Study and Making It FAIR: Reusable Tools and Procedures from a Population-Based Cohort Study

Auteurs: Carsten Oliver Schmidt, Stephan Struckmann, Maik Scholz, Janka Schössow, Dörte Radke, Adrian Richter, Achim Reineke, Elisa Kasbohm, Joany Mariño Coronado, Birgit Schauer, Kristin Henselin, Susanne Westphal, Darko Balke, Torsten Leddig, Henry Völzke, Jörg Henke
Publié dans: European Federation for Medical Informatics, 2023
Éditeur: IOS Press EBooks
DOI: 10.3233/shti230292

A Radiomics Approach to Analyze Cardiac Alterations in Hypertension

Auteurs: Irem Cetin, Steffen E. Petersen, Sandy Napel, Oscar Camara, Miguel Angel Gonzalez Ballester, Karim Lekadir
Publié dans: 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019), 2019, Page(s) 640-643, ISBN 978-1-5386-3641-1
Éditeur: IEEE
DOI: 10.1109/isbi.2019.8759440

An agenda-setting paper on data sharing platforms: euCanSHare workshop

Auteurs: Thijs Devriendt, Clemens Ammann, Folkert W. Asselbergs, Alexander Bernier, Rodrigo Costas, Matthias G. Friedrich, Josep L. Gelpi, Marjo-Riitta Jarvelin, Kari Kuulasmaa, Karim Lekadir, Michaela Th. Mayrhofer, Vaclav Papez, Gerard Pasterkamp, Steffen E. Petersen, Carsten Oliver Schmidt, Jeanette Schulz-Menger, Stefan Söderberg, Mahsa Shabani, Giovanni Veronesi, Darian Steven Viezzer, Pascal Borry
Publié dans: Open Research Europe, 2021, ISSN 2732-5121
Éditeur: F1000 Research
DOI: 10.12688/openreseurope.13860.2

Combining Multi-Sequence and Synthetic Images for Improved Segmentation of Late Gadolinium Enhancement Cardiac MRI

Auteurs: Víctor M. Campello, Carlos Martín-Isla, Cristian Izquierdo, Steffen E. Petersen, Miguel A. González Ballester, Karim Lekadir
Publié dans: Statistical Atlases and Computational Models of the Heart. Multi-Sequence CMR Segmentation, CRT-EPiggy and LV Full Quantification Challenges - 10th International Workshop, STACOM 2019, Held in Conjunction with MICCAI 2019, Shenzhen, China, October 13, 2019, Revised Selected Papers, Numéro 12009, 2020, Page(s) 290-299, ISBN 978-3-030-39073-0
Éditeur: Springer International Publishing
DOI: 10.1007/978-3-030-39074-7_31

Editorial: Current and Future Role of Artificial Intelligence in Cardiac Imaging

Auteurs: Karim Lekadir, Tim Leiner, Alistair A. Young, Steffen E. Petersen
Publié dans: Frontiers in Cardiovascular Medicine, 2020
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fcvm.2020.00137

Reproducible radiomics through automated machine learning validated on twelve clinical applications

Auteurs: Martijn P. A. Starmans, Sebastian R. van der Voort, Thomas Phil, Milea J. M. Timbergen, Melissa Vos, Guillaume A. Padmos, Wouter Kessels, David Hanff, Dirk J. Grunhagen, Cornelis Verhoef, Stefan Sleijfer, Martin J. van den Bent, Marion Smits, Roy S. Dwarkasing, Christopher J. Els, Federico Fiduzi, Geert J. L. H. van Leenders, Anela Blazevic, Johannes Hofland, Tessa Brabander, Renza A. H. van Gils,
Publié dans: Medical Image Analysis, 2022, ISSN 1361-8415
Éditeur: Elsevier BV
DOI: 10.48550/arxiv.2108.08618

The WORC database: MRI and CT scans, segmentations, and clinical labels for 930 patients from six radiomics studies

Auteurs: Martijn P.A. Starmans, Milea J.M. Timbergen, Melissa Vos, Guillaume A. Padmos, Dirk J. Grünhagen, Cornelis Verhoef, Stefan Sleijfer, Geert J.L.H. van Leenders, Florian E. Buisman, Francois E.J.A. Willemssen, Bas Groot Koerkamp, Lindsay Angus, Astrid A.M. van der Veldt, Ana Rajicic, Arlette E. Odink, Michel Renckens, Michail Doukas, Rob A. de Man, Jan N.M. IJzermans, Razvan L. Miclea, Peter
Publié dans: Data in Brief, 2021, ISSN 2352-3409
Éditeur: Elsevier BV
DOI: 10.1101/2021.08.19.21262238

An agenda-setting paper on data sharing platforms : euCanSHare workshop

Auteurs: Thijs Devriendt; Clemens Ammann; Folkert W. Asselberghs; Alexander Bernier; Rodrigo Costas; Matthias G. Friedrich; Josep L. Gelpi; Marjo-Riitta Jarvelin; Kari Kuulasmaa; Karim Lekadir; Michaela Th. Mayrhofer; Vaclav Papez; Gerard Pasterkamp; Steffen E. Petersen; Carsten Oliver Schmidt; Jeanette Schulz-Menger; Stefan Söderberg; Mahsa Shabani; Giovanni Veronesi; Darian Steven Viezzer; Pascal Borry
Publié dans: Open Research Europe, Numéro 12, 2021, ISSN 2732-5121
Éditeur: EC
DOI: 10.12688/openreseurope.13860.1

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