Rezultaty
Transcriptomics landscape in dedicated cohorts (GEPAR-TREIZE, PARTNER, PBCP, ONCOBIOTICS, NIRVANA, CHECK’UP)
Immunoscore on most of ONCOBIOME cohorts
Immunoscore on most of ONCOBIOME cohorts using a standardized methodology
Completion of running the metagenomics protocolsCompletion of running the metagenomics protocols on all the samples included in the project
Epidemiological analysisEpidemiological analysis of main flaws in data interpretation
Discovery of commensal-specific regulatory propertiesDiscovery of commensalspecific regulatory properties on immune cell migration
Banking, sequencing and functional description of new commensalsBanking sequencing and functional description of new commensals
Metabolomics on plasmaMetabolomics on plasma in dedicated cohorts
Preliminary dietary dataPreliminary dietary data from existing cohorts where available
Standardization of shotgun microbiome analysisA detailed technical description of standardization of shotgun microbiome analysis on the unified database
Tumor mutational burdenTumor mutational burden and PDL1 for dedicated cohorts
Discovery of commensal-specific metabolitesDiscovery of commensal one or severalspecific metabolites
Freeze of the database of the profilesFreeze of the database of the profiles from all the metagenomes of the project obtained with the tools of D22
Culturomics of E. hiraeCulturomics of E hirae for most cohorts amenable to ICBs
Completion of the curatedCancerMetagenomicData resourcePublikacje
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