VIral and BacteRial Adhesin Network Training

CORDIS oferuje możliwość skorzystania z odnośników do publicznie dostępnych publikacji i rezultatów projektów realizowanych w ramach programów ramowych HORYZONT.

Odnośniki do rezultatów i publikacji związanych z poszczególnymi projektami 7PR, a także odnośniki do niektórych konkretnych kategorii wyników, takich jak zbiory danych i oprogramowanie, są dynamicznie pobierane z systemu OpenAIRE .

Rezultaty

Release of the modelling protocol for adhesin structure determination as software
Report with updated exploitation strategy
Report on exploitation strategy
Outreach plan

Plan for communications and outreach

White paper on best practices in the ETN
Data management plan

>10 review articles published/in press
Developed materials and methods for capture/enrichment of multiple pathogens based on adhesin-ligand binding

Developed materials and methods for captureenrichment of multiple pathogens based on adhesinligand binding

Initial website

Initial public website goes live

30 publications in high-quality open-access journals

30 publications in highquality openaccess journals

Recruitment of all ESRs
Supervisory Board of network

Compulsory Deliverable

Mapping of Interfaces between viral adhesins and receptors

Publikacje

Novel Biorecognition Elements against Pathogens in the Design of State-of-the Art Diagnostics

Autorzy: Sande M.G, Rodrigues J.L, Ferreira D, Silva C.J, Rodrigues L. R.
Opublikowane w: Biosensors, 2021, ISSN 2079-6374
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/bios11110418

Complete Genome Sequence of Bartonella alsatica Strain IBS 382 (CIP 105477)

Autorzy: Arno Thibau, Tilman G. Schultze, Wibke Ballhorn, Volkhard A. J. Kempf
Opublikowane w: Microbiology Resource Announcements, Numer Volume 9 Numer 34, 2020, ISSN 2576-098X
Wydawca: American Society for Microbiology
DOI: 10.1128/mra.00769-20

Host-Pathogen Adhesion as the Basis of Innovative Diagnostics for Emerging Pathogens

Autorzy: Alex van Belkum, Carina Almeida, Benjamin Bardiaux, Sarah V. Barrass, Sarah J. Butcher, Tuğçe Çaykara, Sounak Chowdhury, Rucha Datar, Ian Eastwood, Adrian Goldman, Manisha Goyal, Lotta Happonen, Nadia Izadi-Pruneyre, Theis Jacobsen, Pirjo H. Johnson, Volkhard A. J. Kempf, Andreas Kiessling, Juan Leva Bueno, Anchal Malik, Johan Malmström, Ina Meuskens, Paul A. Milner, Michael Nilges, Nicole Pam
Opublikowane w: Diagnostics, Numer 11/7, 2021, Strona(/y) 1259, ISSN 2075-4418
Wydawca: MDPI
DOI: 10.3390/diagnostics11071259

Secondary structure and 1H, 15N & 13C resonance assignments of the periplasmic domain of OutG, Major pseudodopilin from Dickeya dadantii type II secretion system

Autorzy: Jacobsen T, Dazzoni R, Renault M.G, Bardiaux B, Nilges M, Shevchik V, Izadi-Pruneyre N.
Opublikowane w: Biomol NMR Assign, 2022, ISSN 1874-2718
Wydawca: Springer Verlag
DOI: 10.1007/s12104-022-10085-4

Type V Secretion Systems: An Overview of Passenger Domain Functions

Autorzy: Ina Meuskens, Athanasios Saragliadis, Jack C. Leo, Dirk Linke
Opublikowane w: Frontiers in Microbiology, Numer 10, 2019, ISSN 1664-302X
Wydawca: Frontiers Media
DOI: 10.3389/fmicb.2019.01163

Inertial focusing of microparticles, bacteria, and blood in serpentine glass channels

Autorzy: Pablo Rodriguez-Mateos, Bongkot Ngamsom, Charlotte E. Dyer, Alexander Iles, Nicole Pamme
Opublikowane w: Electrophoresis, Numer 42, 2021, Strona(/y) 2246-2255, ISSN 0173-0835
Wydawca: John Wiley & Sons Ltd.
DOI: 10.1002/elps.202100083

Dynamic relocalization of cytosolic type III secretion system components prevents premature protein secretion at low external pH

Autorzy: Stephan Wimmi, Alexander Balinovic, Hannah Jeckel, Lisa Selinger, Dimitrios Lampaki, Emma Eisemann, Ina Meuskens, Dirk Linke, Knut Drescher, Ulrike Endesfelder, Andreas Diepold
Opublikowane w: Nature Communications, Numer 12/1, 2021, ISSN 2041-1723
Wydawca: Nature Publishing Group
DOI: 10.1038/s41467-021-21863-4

Molecular Organisation of Tick-Borne Encephalitis Virus

Autorzy: Pulkkinen L.I.A, Barrass S. V, Domanska A, Överby A.K, Anastasina M, Butcher S. J.
Opublikowane w: Viruses, 2022, ISSN 1999-4915
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/v14040792

Long-Read Sequencing Reveals Genetic Adaptation of Bartonella Adhesin A Among Different Bartonella henselae Isolates

Autorzy: Arno Thibau, Katharina Hipp, Diana J. Vaca, Sounak Chowdhury, Johan Malmström, Athanasios Saragliadis, Wibke Ballhorn, Dirk Linke, Volkhard A. J. Kempf
Opublikowane w: Frontiers in Microbiology, Numer Volume 13, Article 838267, 2022, ISSN 1664-302X
Wydawca: Frontiers Media
DOI: 10.3389/fmicb.2022.838267

The C-terminal head domain of Burkholderia pseudomallei BpaC has a striking hydrophilic core with an extensive solvente network

Autorzy: Kiessling A. R, Harris S. A, Weimer K. M, Wells G, Goldman A.
Opublikowane w: Mol Microbiology, 2022, ISSN 1365-2958
Wydawca: Wiley
DOI: 10.1111/mmi.14953

Different SARS-CoV-2 haplotypes associate with geographic origin and case fatality rates of COVID-19 patients

Autorzy: Goyal M, De Bruyne K, van Belkum A, West B
Opublikowane w: Infection Genetics and Evolution, Numer 90, 2021, ISSN 1567-1348
Wydawca: Elsevier BV
DOI: 10.1016/j.meegid.2021.104730

Automated antimicrobial susceptibility testing of slow-growing Pseudomonas aeruginosa strains in the presence of tetrazolium salt WST-1

Autorzy: Datar R, Perrin G, Chalansonnet V, Perry A, Perry JD, van Belkum A, Orenga S
Opublikowane w: Journal of Microbiological Methods, Numer 186, 2021, ISSN 0167-7012
Wydawca: Elsevier BV
DOI: 10.1016/j.mimet.2021.106252

The Trimeric Autotransporter Adhesin YadA of Yersina enterocolitica Serotype O:9 Binds Glycan Moieties

Autorzy: Meuskens I, Leva-Bueno J, Millner P, Schutz M, Peyman SA, Linke D.
Opublikowane w: Front Microbiology, Numer Volume 22, 2022, ISSN 1664-302X
Wydawca: Frontiers Media
DOI: 10.3389/fmicb.2021.738818

Interaction of Bartonella henselae with fibronectin represents the molecular basis for adhesion to host cells

Autorzy: Diana J. Vaca, Arno Thibau, Matthias S. Leisegang, Johan Malmström, Dirk Linke, Johannes A. Eble, Wibke Ballhorn, Martin Schaller, Lotta Happonen, Volkhard A. J. Kempf
Opublikowane w: Microbiology Spectrum, 2022, ISSN 2165-0497
Wydawca: American Society for Microbiology
DOI: 10.1128/spectrum.00598-22

A lab-on-a-chip platform for integrated extraction and detection of SARS-CoV-2 RNA in resource-limited settings

Autorzy: Pablo Rodriguez-Mateos, Bongkot Ngamsom, Cheryl Walter, Charlotte E.Dyer, Jesse Gitaka Alexander Iles, Nicole Pamme
Opublikowane w: Analytica Chimica Acta, Numer Volume 1177, 8 September 2021, 2021, Strona(/y) 338758, ISSN 0003-2670
Wydawca: Elsevier BV
DOI: 10.1016/j.aca.2021.338758

Distinct serotypes of streptococcal M proteins mediate fibrinogen-dependent platelet activation and pro-inflammatory effects

Autorzy: Palm F, Chowdhury S, Wettemark S, Malmström J, Happonen L, Shannon O
Opublikowane w: Infect Immunology, 2022, ISSN 2379-5077
Wydawca: ASM Journals
DOI: 10.1128/iai.00462-21

Contemporary diagnostics for medically relevant fastidious microorganisms belonging to the genera Anaplasma, Bartonella, Coxiella, Orientia and Rickettsia

Autorzy: Diana J. Vaca, Gerhard Dobler, Silke F. Fischer, Christian Keller, Maik Konrad, Friederike D. von Loewenich, Sylvain Orenga, Siddhesh U. Sapre, Alex van Belkum, Volkhard A. J. Kempf
Opublikowane w: FEMS Microbiology Reviews, Numer fuac013, 2022, ISSN 0168-6445
Wydawca: Blackwell
DOI: 10.1093/femsre/fuac013

Immunogenicity of trimeric autotransporter adhesins and their potential as vaccine targets

Autorzy: Arno Thibau, Alexander A. Dichter, Diana J. Vaca, Dirk Linke, Adrian Goldman, Volkhard A. J. Kempf
Opublikowane w: Medical Microbiology and Immunology, 2019, ISSN 0300-8584
Wydawca: Springer Verlag
DOI: 10.1007/s00430-019-00649-y

Interaction with the host: the role of fibronectin and extracellular matrix proteins in the adhesion of Gram-negative bacteria

Autorzy: Diana J. Vaca, Arno Thibau, Monika Schütz, Peter Kraiczy, Lotta Happonen, Johan Malmström, Volkhard A. J. Kempf
Opublikowane w: Medical Microbiology and Immunology, 2019, ISSN 0300-8584
Wydawca: Springer Verlag
DOI: 10.1007/s00430-019-00644-3

Recent advances in the understanding of trimeric autotransporter adhesions

Autorzy: Andreas R. Kiessling, Anchal Malik, Adrian Goldman
Opublikowane w: Medical Microbiology and Immunology (2019), 2019, ISSN 0300-8584
Wydawca: Springer Verlag
DOI: 10.1007/s00430-019-00652-3

Brexit in the channel: Europe cut off: a young German scientist's perspective

Autorzy: Andreas R. Kiessling
Opublikowane w: Medical Microbiology and Immunology, 2019, ISSN 0300-8584
Wydawca: Springer Verlag
DOI: 10.1007/s00430-019-00646-1

Human adenovirus binding to host cell receptors: a structural view

Autorzy: Aleksandra Cecylia Stasiak, Thilo Stehle
Opublikowane w: Medical Microbiology and Immunology, 2019, ISSN 0300-8584
Wydawca: Springer Verlag
DOI: 10.1007/s00430-019-00645-2

FISH and chips: a review of microfluidic platforms for FISH analysis

Autorzy: Pablo Rodriguez-Mateos, Nuno Filipe Azevedo, Carina Almeida, Nicole Pamme
Opublikowane w: Medical Microbiology and Immunology, 2020, ISSN 0300-8584
Wydawca: Springer Verlag
DOI: 10.1007/s00430-019-00654-1

Advances in high-throughput methods for the identification of virus receptors

Autorzy: Sarah V. Barrass, Sarah J. Butcher
Opublikowane w: Medical Microbiology and Immunology, 2019, ISSN 0300-8584
Wydawca: Springer Verlag
DOI: 10.1007/s00430-019-00653-2

Innovative training networks: a new way of collaboration-propped PhD training

Autorzy: Ina Meuskens, Seamus Higson, Dirk Linke
Opublikowane w: Medical Microbiology and Immunology, 2019, ISSN 0300-8584
Wydawca: Springer Verlag
DOI: 10.1007/s00430-019-00647-0

New solutions to capture and enrich bacteria from complex samples

Autorzy: Maria G. Sande, Tugçe Çaykara, Carla Joana Silva, Ligia R. Rodrigues
Opublikowane w: Medical Microbiology and Immunology, 2020, ISSN 0300-8584
Wydawca: Springer Verlag
DOI: 10.1007/s00430-020-00659-1

Structural proteomics, electron cryo-microscopy and structural modeling approaches in bacteria–human protein interactions

Autorzy: Sounak Chowdhury, Lotta Happonen, Hamed Khakzad, Lars Malmström, Johan Malmström
Opublikowane w: Medical Microbiology and Immunology, 2020, ISSN 0300-8584
Wydawca: Springer Verlag
DOI: 10.1007/s00430-020-00663-5

Phenotypic and Genomic Variability of Serial Peri-Lung Transplantation Pseudomonas aeruginosa Isolates From Cystic Fibrosis Patients

Autorzy: Datar R, Coello Pelegrin A, Orenga S, Chalansonnet V, Mirande C, Dombrecht J, Perry JD, Perry A, Goossens H, van Belkum A
Opublikowane w: Frontiers in Microbiology, Numer Volume 12, 2021, ISSN 1664-302X
Wydawca: Frontiers Media
DOI: 10.3389/fmicb.2021.604555

Recent Advances in Rapid Antimicrobial Susceptibility Testing

Autorzy: Datar R, Orenge S, Pogorelcnik R, Rochas O, Simner PJ, van Belkum A
Opublikowane w: Clinical Chemistry, Numer Volume 68, Numer 1, 2021, ISSN 0009-9147
Wydawca: American Association for Clinical Chemistry, Inc.
DOI: 10.1093/clinchem/hvab207

Streptococcus pyogenes Forms Serotype- and Local Environment-Dependent Interspecies Protein Complexes

Autorzy: Chowdhury S, Khakzad H, Bergdahl GE, Lood R, Ekström S, Linke D, Malmström L, Happonen L, Malmström J.
Opublikowane w: mSystems, 2021, ISSN 2379-5077
Wydawca: ASM Journals
DOI: 10.1128/msystems.00271-21

Retrospective Definition of Clostridioides difficile PCR Ribotypes on the Basis of Whole Genome Polymorphisms: A Proof of Principle Study

Autorzy: Goyal M, Hauben L, Pouseele H, Jaillard M, De Bruyne K, van Belkum A, Goering R
Opublikowane w: Diagnostics, Numer 10(12), 2020, ISSN 2075-4418
Wydawca: MDPI
DOI: 10.3390/diagnostics10121078

Proteome-wide cross-linking mass spectrometry to identify specific virus capsid-host interactions between tick-borne encephalitis virus and neuroblastoma cells

Autorzy: Barrass S. V, Pulkkinen L.I.A, Vapalahti O, Kuivanen S. H, Anastasina M, Happonen L, Butcher S. J.
Opublikowane w: bioRxiv, 2021, ISSN 2692-8205
Wydawca: Cold Spring Harbor Laboratory
DOI: 10.1101/2021.10.29.464531

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