Deliverables
A report describing the status of the first delivery of activities regarding communication and the potential impact of the stakeholders
Study cases promotional materialDelivery of communication material dedicated to promote the showcases of Rafts4Biotech among the stakeholders
Visual identity, website and social networksGeneration of a corporative logo and corporative colors for rafts4Biotech Visual identityCreation and launching of a websiteIntegration of rafts4biotech in social networks
Completion of industry eventsA report of the completion of the industry event and study the possibility to interact and to partner with the companies involved in the event
Impact reportA report of the impact of the communication activities on the stakeholders and evaluation of the feedback of the stakeholders regarding the rafts4biotech activities and technology
Project management guideline meeting for project overall and WPsDescription of the agenda for Project managementGuideline meeting for project overall and completion of the work packages associated with this project
Student training activitiesA report of the overall training activities that have been performed during the completion of rafts4Biotech to train the students involved in the completion of this project for their capacity to become future investigators
Final videoVideo dedicated to show the execution of the overall project and the potential aspects four technology to the society and the stakeholders
Mid-project communication and engagement materialA report describing the status of the midproject delivery of activities regarding communication and engagement material and the potential impact of the stakeholders
a report of the genetic and physiological characteristics of the second line of microbial chassis and its suitability for industrial implementation
Description of the academic and industrial dissemination activitiesA report of the description of the most relevant academic and industrial dissemination activities that have been performed during the completion of this project
Impact of showcases in their respective market segments, potential to expand the technology to other market segmentsA study of the Impact of the showcases in their respective market segments and description of the possibilities to integrate our raftbased technology to other market segments
A report of the activities performed using the first line of microbial chassis to adapt these strains and optimise them to industrially relevant scenarios
Description of the optimal design of the microfluidic chip and the related software for transforming chip data into kinetic valuesA report of the perform of the microfluidic chip and the related software for transforming chip data into kinetic values
Description of the optimization of pathways during escalation to industrial settingsA report of the mathematical calculations and in vitro experimental setup to define the suitability of the optimization of showcase pathways during escalation to industrial application
Description of the design of capillary microfluidic device and related software for automated control of bioreactor deviceA report of the design of capillary microfluidic device description of the related software and the possibilities to elevate them to marketable applications
Iterative loop 2A report of the modifications and adaptations of the synthetic lipid rafts in the second generation of microbial chassis to improve their performance in laboratory conditions
A report of the results and data analysis of the metabolomic data of the first and second line of microbial chassis
Presentation of Data Management PlanA report of the main activities delineated to handle the scientific data produced during the completion of rafts4Biotech
Transcriptomics data analyses and comparison studiesA report of the results and data analysis of the transcriptomics data of the first and second line of microbial chassis
Proteomic data analyses and comparison studiesA report of the results and data analysis of the proteomics data of the first and second line of microbial chassis
2ndLMCs for Cosmetics-SCA report of the genetic and physiological characteristics of the second line of microbial chassis that will be generated to produce the showcase CosmeticsSC
2ndLMCs for Feed-SCA report of the genetic and physiological characteristics of the second line of microbial chassis that will be generated to produce the showcase FeedSC
Publications
Author(s):
Björn Richts, Robert Hertel, Sébastien Potot, Anja Poehlein, Rolf Daniel, Ghislain Schyns, Zoltán Prágai, Fabian M. Commichau
Published in:
Microbiology Resource Announcements, Issue 9/32, 2020, ISSN 2576-098X
Publisher:
American Society of Microbiology
DOI:
10.1128/mra.00825-20
Author(s):
Piia Kokkonen, David Bednar, Gaspar Pinto, Zbynek Prokop, Jiri Damborsky
Published in:
Biotechnology Advances, Issue 37/6, 2019, Page(s) 107386, ISSN 0734-9750
Publisher:
Elsevier BV
DOI:
10.1016/j.biotechadv.2019.04.008
Author(s):
Klaudia Chmelova, Eva Sebestova, Veronika Liskova, Andy Beier, David Bednar, Zbynek Prokop, Radka Chaloupkova, Jiri Damborsky
Published in:
Applied and Environmental Microbiology, Issue 86/17, 2020, ISSN 0099-2240
Publisher:
American Society for Microbiology
DOI:
10.1128/aem.02820-19
Author(s):
Piia Kokkonen, Michaela Slanska, Veronika Dockalova, Gaspar P. Pinto, Esther M. Sánchez-Carnerero, Jiri Damborsky, Petr Klán, Zbynek Prokop, David Bednar
Published in:
Computational and Structural Biotechnology Journal, Issue 18, 2020, Page(s) 805-813, ISSN 2001-0370
Publisher:
Elsevier
DOI:
10.1016/j.csbj.2020.03.017
Author(s):
Petra Babkova, Zuzana Dunajova, Radka Chaloupkova, Jiri Damborsky, David Bednar, Martin Marek
Published in:
Computational and Structural Biotechnology Journal, Issue 18, 2020, Page(s) 1497-1508, ISSN 2001-0370
Publisher:
Elsevier
DOI:
10.1016/j.csbj.2020.06.021
Author(s):
Jiri Hon, Simeon Borko, Jan Stourac, Zbynek Prokop, Jaroslav Zendulka, David Bednar, Tomas Martinek, Jiri Damborsky
Published in:
Nucleic Acids Research, Issue 48/W1, 2020, Page(s) W104-W109, ISSN 0305-1048
Publisher:
Oxford University Press
DOI:
10.1093/nar/gkaa372
Author(s):
Gaspar P. Pinto, Ondrej Vavra, Jiri Filipovic, Jan Stourac, David Bednar, Jiri Damborsky
Published in:
Frontiers in Chemistry, Issue 7, 2019, ISSN 2296-2646
Publisher:
Frontiers
DOI:
10.3389/fchem.2019.00709
Author(s):
Faßhauer, Patrick; Busche, Tobias; Kalinowski, Jörn; Mäder, Ulrike; Poehlein, Anja; Daniel, Rolf; Stülke, Jörg
Published in:
Microorganisms, Issue 5, 2021, ISSN 2076-2607
Publisher:
MDPI
DOI:
10.5281/zenodo.4897660
Author(s):
Amanda Y. van Tilburg, Auke J. van Heel, Jörg Stülke, Niels A. W. de Kok, Anne-Stéphanie Rueff, Oscar P. Kuipers
Published in:
ACS Synthetic Biology, Issue 9/7, 2020, Page(s) 1833-1842, ISSN 2161-5063
Publisher:
American Chemical Society
DOI:
10.1021/acssynbio.0c00194
Author(s):
Milos Musil, Rayyan Tariq Khan, Andy Beier, Jan Stourac, Hannes Konegger, Jiri Damborsky, David Bednar
Published in:
Briefings in Bioinformatics, Issue 22/4, 2021, ISSN 1467-5463
Publisher:
Oxford University Press
DOI:
10.1093/bib/bbaa337
Author(s):
Veronika Dockalova, Esther M. Sanchez-Carnerero, Zuzana Dunajova, Eduardo Palao, Michaela Slanska, Tomas Buryska, Jiri Damborsky, Petr Klán, Zbynek Prokop
Published in:
Computational and Structural Biotechnology Journal, Issue 18, 2020, Page(s) 922-932, ISSN 2001-0370
Publisher:
Elsevier
DOI:
10.1016/j.csbj.2020.03.029
Author(s):
Patrick Stargardt, Gerald Striedner, Juergen Mairhofer
Published in:
Microbial Cell Factories, Issue 20/1, 2021, ISSN 1475-2859
Publisher:
BioMed Central
DOI:
10.1186/s12934-021-01512-7
Author(s):
Stanislav Mazurenko, Zbynek Prokop, Jiri Damborsky
Published in:
ACS Catalysis, Issue 10/2, 2020, Page(s) 1210-1223, ISSN 2155-5435
Publisher:
American Chemical Society
DOI:
10.1021/acscatal.9b04321
Author(s):
Milos Musil, Hannes Konegger, Jiri Hon, David Bednar, Jiri Damborsky
Published in:
ACS Catalysis, Issue 9/2, 2018, Page(s) 1033-1054, ISSN 2155-5435
Publisher:
American Chemical Society
DOI:
10.1021/acscatal.8b03613
Author(s):
Amanda Y. van Tilburg, Julius A. Fülleborn, Alexander Reder, Uwe Völker, Jörg Stülke, Auke J. van Heel, Oscar P. Kuipers
Published in:
Applied and Environmental Microbiology, 2021, ISSN 0099-2240
Publisher:
American Society for Microbiology
DOI:
10.1128/aem.01123-21
Author(s):
Daniel R. Reuß, Fabian M. Commichau, Jörg Stülke
Published in:
Microbial Biotechnology, Issue 10/5, 2017, Page(s) 1259-1263, ISSN 1751-7915
Publisher:
John Wiley & Sons, Inc.
DOI:
10.1111/1751-7915.12784
Author(s):
Auke J van Heel, Anne de Jong, Chunxu Song, Jakob H Viel, Jan Kok, Oscar P Kuipers
Published in:
Nucleic Acids Research, 2018, ISSN 0305-1048
Publisher:
Oxford University Press
DOI:
10.1093/nar/gky383
Author(s):
Lenka Sumbalova, Jan Stourac, Tomas Martinek, David Bednar, Jiri Damborsky
Published in:
Nucleic Acids Research, Issue 46/W1, 2018, Page(s) W356-W362, ISSN 0305-1048
Publisher:
Oxford University Press
DOI:
10.1093/nar/gky417
Author(s):
Stanislav Mazurenko, Jan Stourac, Antonin Kunka, Sava Nedeljković, David Bednar, Zbynek Prokop, Jiri Damborsky
Published in:
Nucleic Acids Research, Issue 46/W1, 2018, Page(s) W344-W349, ISSN 0305-1048
Publisher:
Oxford University Press
DOI:
10.1093/nar/gky358
Author(s):
Szczesny, M., C. Beloin and J.-M. Ghigo
Published in:
mBio. In press., 2018, ISSN 0305-1048
Publisher:
Oxford University Press
DOI:
10.1128/mBio.01415-18
Author(s):
Martin Benda, Simon Woelfel, Patrick Faßhauer, Katrin Gunka, Stefan Klumpp, Anja Poehlein, Debora Kálalová, Hana Šanderová, Rolf Daniel, Libor Krásný, Jörg Stülke
Published in:
Nucleic Acids Research, Issue 49/12, 2021, Page(s) 7088-7102, ISSN 0305-1048
Publisher:
Oxford University Press
DOI:
10.1093/nar/gkab528
Author(s):
Anika Klewing; Byoung-Mo Koo; Larissa Krüger; Anja Poehlein; Daniel R. Reuß; Rolf Daniel; Carol A. Gross; Jörg Stülke
Published in:
Environmental Microbiology, Issue 13, 2021, ISSN 1462-2920
Publisher:
Wiley
DOI:
10.1101/2020.05.20.106443
Author(s):
Klara Markova, Klaudia Chmelova, Sérgio M. Marques, Philippe Carpentier, David Bednar, Jiri Damborsky, Martin Marek
Published in:
Chemical Science, Issue 11/41, 2020, Page(s) 11162-11178, ISSN 2041-6520
Publisher:
Royal Society of Chemistry
DOI:
10.1039/d0sc03367g
Author(s):
Jingqi Chen, Auke J. van Heel, Oscar P. Kuipers
Published in:
mBio, Issue 11/6, 2020, ISSN 2161-2129
Publisher:
American Society for Microbiology
DOI:
10.1128/mbio.02825-20
Author(s):
Martin Demko, Lukáš Chrást, Pavel Dvořák, Jiří Damborský, David Šafránek
Published in:
Microorganisms, Issue 7/11, 2019, Page(s) 553, ISSN 2076-2607
Publisher:
MDPI
DOI:
10.3390/microorganisms7110553
Author(s):
Martin Marek, Radka Chaloupkova, Tatyana Prudnikova, Yukari Sato, Pavlina Rezacova, Yuji Nagata, Ivana Kuta Smatanova, Jiri Damborsky
Published in:
Computational and Structural Biotechnology Journal, Issue 18, 2020, Page(s) 1352-1362, ISSN 2001-0370
Publisher:
Elsevier
DOI:
10.1016/j.csbj.2020.05.019
Author(s):
Jingqi Chen, Auke J. van Heel, Oscar P. Kuipers
Published in:
mBio, 2021, ISSN 2150-7511
Publisher:
American Society of Microbiology
DOI:
10.1128/mbio.01219-21
Author(s):
Björn Richts, Sabine Lentes, Anja Poehlein, Rolf Daniel, Fabian M. Commichau
Published in:
Environmental Microbiology Reports, Issue 13/2, 2021, Page(s) 218-233, ISSN 1758-2229
Publisher:
Wiley-Blackwell
DOI:
10.1111/1758-2229.12936
Intellectual Property Rights
Application/Publication number:
20
20087354
Date:
2020-12-20
Applicant(s):
ENGENES BIOTECH GMBH
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