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Decision Support and Information Management System for Breast Cancer

Deliverables

Project dissemination and communication plan

Submission of the project dissemination and communication plan.

Publications

Classification of mammographic microcalcification clusters with machine learning confidence levels

Author(s): Andrik Rampun, Hui Wang, Bryan Scotney, Philip Morrow, Reyer Zwiggelaar
Published in: 14th International Workshop on Breast Imaging (IWBI 2018), 2018, Page(s) 35, ISBN 9781-510620087
Publisher: SPIE
DOI: 10.1117/12.2318058

Local Septenary Patterns for Breast Density Classification in Mammograms

Author(s): Rampun, Andrik; Scotney, Bryan; Wang, Hui; Morrow, Philip
Published in: Irish Machine Vision and Image Processing 2018 (IMVIP 2018), Issue 1, 2018
Publisher: Irish Machine Vision and Image Processing 2018 (IMVIP 2018)
DOI: 10.5281/zenodo.1465955

Architecture for a Multimodal and Domain-Independent Clinical Decision Support System Software Development Kit.

Author(s): Muro, Naiara; Larburu, Nekane; Torres, Jordi; Kerexetab, Jon; Artolab, Garazi; Arrueb, Mónica; Macía, Iván; Séroussi, Brigitte
Published in: 41st International Engineering in Medicine and Biology Conference (EMBC2019), Issue 1, 2019
Publisher: 41st International Engineering in Medicine and Biology Conference (EMBC2019)
DOI: 10.5281/zenodo.3353723

Feature selection and weighing for case-based reasoning system using random forests

Author(s): Booma Devi Sekar, Hui Wang
Published in: Data Science and Knowledge Engineering for Sensing Decision Support, 2018, Page(s) 421-429, ISBN 978-981-327-323-8
Publisher: WORLD SCIENTIFIC
DOI: 10.1142/9789813273238_0055

Weighting Experience-Based Decision Support on the Basis of Clinical Outcomes' Assessment

Author(s): Muro, Naiara; Larburu, Nekane; Bouaud, Jacques; Seroussi, Brigitte
Published in: Studies in Health Technology and Informatics,, Issue Volume 244: The Practice of Patient Centered Care: Empowering and Engaging Patients in the Digital Era, 2017, Page(s) 33 - 37
Publisher: IOS Press
DOI: 10.3233/978-1-61499-824-2-33

Confidence Analysis for Breast Mass Image Classification

Author(s): Andrik Rampun, Hui Wang, Bryan Scotney, Philip Morrow, Reyer Zwiggelaar
Published in: 2018 25th IEEE International Conference on Image Processing (ICIP), 2018, Page(s) 2072-2076, ISBN 978-1-4799-7061-2
Publisher: IEEE
DOI: 10.1109/ICIP.2018.8451782

Combining the Generic Entity-Attribute-Value Model and Terminological Models into a Common Ontology to Enable Data Integration and Decision Support.

Author(s): Bouaud, Jacques; Guézennec, Gilles; Séroussi, Brigitte
Published in: Building Continents of Knowledge in Oceans of Data: The Future of Co-Created eHealth, 2018, Issue 1, 2018, Page(s) 541 - 545
Publisher: European Federation for Medical Informatics (EFMI) and IOS Press
DOI: 10.3233/978-1-61499-852-5-541

Implementing Guideline-Based, Experience-Based, and Case-Based Approaches to Enrich Decision Support for the Management of Breast Cancer Patients in the DESIREE Project

Author(s): Seroussi, Brigitte; Lamy, Jean-Baptiste; Muro, Naiara; Larburu, Nekane; Sekar, Booma Devi; Guézennec, Gilles; Bouaud, Jacques
Published in: Volume 255: Decision Support Systems and Education,, Issue 1, 2018, Page(s) 190 - 194.
Publisher: IOS Press
DOI: 10.3233/978-1-61499-921-8-190

Reconciliation of multiple guidelines for decision support: a case study on the multidisciplinary management of breast cancer within the DESIREE project.

Author(s): Séroussi, Brigitte; Guezennec, Gilles; Lamy, Jean-Baptiste; Muro, Naiara; Larburu, Nekane; Sekar, Booma Devi; Prebet, Coralie; Bouaud, Jacques
Published in: AMIA Annual Symposium Proceedings, Online Archive, ©2017 AMIA, Issue 2, 2017, Page(s) PMID: 29854222
Publisher: AMIA Annual Symposium Proceedings, Online Archive
DOI: 10.5281/zenodo.1466821

Taking into Account the Complementarity of Contemporary Breast Cancer Guidelines to Leverage Decision Support in the DESIREE Project.

Author(s): Prebet, Coralie; Bouaud, Jacques; Guézennec, Gilles; Seroussi, Brigitte
Published in: Volume 247: Building Continents of Knowledge in Oceans of Data: The Future of Co-Created eHealth, Issue 2, 2018, Page(s) 755 - 759
Publisher: European Federation for Medical Informatics (EFMI) and IOS Press
DOI: 10.3233/978-1-61499-852-5-755

Gathering Real World Evidence Through the Evaluation of Decision History

Author(s): Muro, Naiara; Larburu, Nekane; Jacques Bouaud; Brigitte Seroussi
Published in: Studies in Health Technology and Informatics: 262: Health Informatics Vision: From Data via Information to Knowledge, Issue 2, 2019, Page(s) 134 - 137
Publisher: IOS Press
DOI: 10.3233/SHTI190035

Breast Cancer Digital Patient Model to Capture and Visualize Real World Data

Author(s): Larburu, Nekane; Arrúe, Mónica; Macía, Iván; Kerexeta, Jon; Muro, Naiara
Published in: Issue 4, 2019
Publisher: 32th IEEE International Symposium on Computer-Based Medical Systems (IEEE CBMS2019)
DOI: 10.5281/zenodo.3353629

Breast Density Classification using Local Septenary Patterns: A Multi-resolution and Multi-Topology Approach

Author(s): Rampun, Andrik; Scotney, Bryan W.; Morrow, Philip J.; Wang, Hui
Published in: Issue 4, 2019
Publisher: 32nd IEEE CBMS International Symposium on Computer-Based Medical Systems (IEEE CBMS2019)
DOI: 10.5281/zenodo.3353623

Hierarchical visual case-based reasoning for supporting breast cancer therapy

Author(s): Lamy, Jean-Baptiste; Sekar, Boomadevi; Guézennec, Gilles; Bouaud, Jacques; Séroussi, Brigitte
Published in: Issue 2, 2019
Publisher: 5th International Conference on Advances in Biomedical Engineering (ICABME 2019)
DOI: 10.5281/zenodo.3353732

Using the Recommendations Inferred by a Decision Support System to Compare Breast Cancer Clinical Practice Guidelines.

Author(s): Seroussi, B.; Prebet, C.; Ngo, C.; Teixeira, L.; Guézennec, G.; Bouaud, J.
Published in: Studies in Health Technology and Informatics: 258: ICT for Health Science Research, Issue 4, 2019, Page(s) 60-64
Publisher: IOS Press
DOI: 10.3233/978-1-61499-959-1-60

DESIREE - a web-based software ecosystem for the personalized, collaborative and multidisciplinary management of primary breast cancer

Author(s): Nekane Larburu, Naiara Muro, Monica Arrue, Roberto Alvarez, Jon Kerexeta
Published in: 2018 IEEE 20th International Conference on e-Health Networking, Applications and Services (Healthcom), 2018, Page(s) 1-2, ISBN 978-1-5386-4294-8
Publisher: IEEE
DOI: 10.1109/healthcom.2018.8531099

Intelligent Clinical Decision Support Systems for Patient-Centered Healthcare in Breast Cancer Oncology

Author(s): Boomadevi Sekar, Jean-Baptiste Lamy, Naiara Muro, Amaia Ugarriza Pinedo, Brigitte Seroussi, Nekane Larburu, Gilles Guezennec, Jacques Bouaud, Frank Guijarro Masero, Monica Arrue, Hui Wang
Published in: 2018 IEEE 20th International Conference on e-Health Networking, Applications and Services (Healthcom), 2018, Page(s) 1-6, ISBN 978-1-5386-4294-8
Publisher: IEEE
DOI: 10.1109/healthcom.2018.8531128

Exploring Breast Cancer Patterns for Different Outcomes using Artificial Intelligence

Author(s): Nekane Larburu, Monica Arrue, Naiara Muro, Roberto Alvarez, Jon Kerexeta
Published in: 2018 IEEE 20th International Conference on e-Health Networking, Applications and Services (Healthcom), 2018, Page(s) 1-6, ISBN 978-1-5386-4294-8
Publisher: IEEE
DOI: 10.1109/healthcom.2018.8531192

Breast Mass Classification in Mammograms using Ensemble Convolutional Neural Networks

Author(s): Andrik Rampun, Bryan W. Scotney, Philip J. Morrow, Hui Wang
Published in: 2018 IEEE 20th International Conference on e-Health Networking, Applications and Services (Healthcom), 2018, Page(s) 1-6, ISBN 978-1-5386-4294-8
Publisher: IEEE
DOI: 10.1109/healthcom.2018.8531154

Breast cancer normal tissue complication modelling and parameter uncertainties

Author(s): Sachpazidis, Ilias; Brualla González, Luis; Roselló Ferrando, Joan; González Sanchis, Amparo; Droukopoulos, Andreas; Papatheodorou, Athina; Azpíroz Puente, Marina
Published in: Not part of the Proceedings, Issue 1, 2017
Publisher: Innovation in Medicine and Healthcare 2017 (InMed 2017)
DOI: 10.5281/zenodo.883865

Augmenting Guideline-based CDSS with Experts’ Knowledge

Author(s): Nekane Larburu, Naiara Muro, Iván Macía, Eider Sánchez, Hui Wang, John Winder, Jacques Boaud, Brigitte Séroussi
Published in: Proceedings of the 10th International Joint Conference on Biomedical Engineering Systems and Technologies, Issue Volume 5, 2017, Page(s) 370-376, ISBN 978-989-758-213-4
Publisher: SCITEPRESS - Science and Technology Publications
DOI: 10.5220/0006213903700376

Advanced Clinical Decision Support Systems Beyond Clinical Guidelines

Author(s): Larburu, Nekane; Muro, Naiara
Published in: Issue 3, 2017
Publisher: Congreso Europeo de Salud Digital: Innovando para avanzar que se celebrará en Donostia-San Sebastián
DOI: 10.5281/zenodo.884510

Breast Density Classification Using Multiresolution Local Quinary Patterns in Mammograms

Author(s): Andrik Rampun, Philip Morrow, Bryan Scotney, John Winder
Published in: Proceedings of 21st Annual Conference on Medical Image Understanding and Analysis (MIUA 2017), 11 - 13 July 2017, Edinburgh, UK, Issue Communications in Computer and Information Science book series (CCIS) volume 723, July 2017, 2017, Page(s) 365-376
Publisher: Springer International Publishing
DOI: 10.1007/978-3-319-60964-5_32

A Quantitative Study of Local Ternary Patterns for Risk Assessment in Mammography

Author(s): Andrik Rampun, Philip J. Morrow, Bryan W. Scotney, John Winder
Published in: Proceedings of International Conference on Innovation in Medicine and Healthcare (KES InMed 2017), 21-23 June 2017, Vilamoura, Portugal, Issue Smart Innovation, Systems and Technologies, vol 71, June 2017, 2017, Page(s) 283-286
Publisher: Springer International Publishing
DOI: 10.1007/978-3-319-59397-5_31

Breast Density Classification Using Local Ternary Patterns in Mammograms

Author(s): Andrik Rampun, Philip Morrow, Bryan Scotney, John Winder
Published in: Proceedings of 14th International Conference on Image Analysis and Recognition (ICIAR 2017), 5-7 July 2017, Montreal, Canada, Issue Lecture Notes in Computer Science, vol 10317, July 2-17, 2017, Page(s) 463-470
Publisher: Springer International Publishing
DOI: 10.1007/978-3-319-59876-5_51

Multimodal Imaging of the Breast to Retrieve the Reference State in the Absence of Gravity Using Finite Element Modeling

Author(s): Remi Salmon, Thanh Chau Nguyen, Linda W. Moore, Barbara L. Bass, Marc Garbey
Published in: Proceedings of International Conference on Innovation in Medicine and Healthcare (KES InMed 2017), 21-23 June 2017, Vilamoura, Portugal, Issue Smart Innovation, Systems and Technologies, vol 71, 2017, 2017, Page(s) 254-263
Publisher: Springer International Publishing
DOI: 10.1007/978-3-319-59397-5_27

Augmenting Guideline Knowledge with Non-Compliant Clinical Decisions: Experience-Based Decision Support

Author(s): Naiara Muro, Nekane Larburu, Jacques Bouaud, Jon Belloso, Gerardo Cajaraville, Ander Urruticoechea, Brigitte Séroussi
Published in: Proceedings of International Conference on Innovation in Medicine and Healthcare (KES InMed 2017), 21-23 June 2017, Vilamoura, Portugal, Issue Smart Innovation, Systems and Technologies, vol 71, June 2017, 2017, Page(s) 217-226
Publisher: Springer International Publishing
DOI: 10.1007/978-3-319-59397-5_23

Clinical and genetic data exploitation for the breast unit management

Author(s): Cabo Díez, M.; Moraga Alapont, P.; Azpíroz Puente, M.
Published in: Not part of the Proceedings (Abstract), Issue 3, 2017
Publisher: Innovation in Medicine and Healthcare 2017 (InMed 2017)
DOI: 10.5281/zenodo.996238

Case-Based Decision Support System for Breast Cancer Management

Author(s): Booma Devi Sekar, Jean-Baptiste Lamy, Nekane Larburu, Brigitte Séroussi, Gilles Guézennec, Jacques Bouaud, Naiara Muro, Hui Wang, Jun Liu
Published in: International Journal of Computational Intelligence Systems, Issue 12/1, 2018, Page(s) 28, ISSN 1875-6883
Publisher: Atlantis Press
DOI: 10.2991/ijcis.2018.25905180

Explainable artificial intelligence for breast cancer: A visual case-based reasoning approach

Author(s): Jean-Baptiste Lamy, Boomadevi Sekar, Gilles Guezennec, Jacques Bouaud, Brigitte Séroussi
Published in: Artificial Intelligence in Medicine, Issue 94, 2019, Page(s) 42-53, ISSN 0933-3657
Publisher: Elsevier BV
DOI: 10.1016/j.artmed.2019.01.001

Breast pectoral muscle segmentation in mammograms using a modified holistically-nested edge detection network

Author(s): Andrik Rampun, Karen López-Linares, Philip J. Morrow, Bryan W. Scotney, Hui Wang, Inmaculada Garcia Ocaña, Grégory Maclair, Reyer Zwiggelaar, Miguel A. González Ballester, Iván Macía
Published in: Medical Image Analysis, Issue 57, 2019, Page(s) 1-17, ISSN 1361-8415
Publisher: Elsevier BV
DOI: 10.1016/j.media.2019.06.007

Breast Density Classification Using Local Quinary Patterns with Various Neighbourhood Topologies

Author(s): Andrik Rampun, Bryan Scotney, Philip Morrow, Hui Wang, John Winder
Published in: Journal of Imaging, Issue 4/1, 2018, Page(s) 14, ISSN 2313-433X
Publisher: MDPI AG
DOI: 10.3390/jimaging4010014

Segmentation of breast MR images using a generalised 2D mathematical model with inflation and deflation forces of active contours

Author(s): Andrik Rampun, Bryan W. Scotney, Philip J. Morrow, Hui Wang, John Winder
Published in: Artificial Intelligence in Medicine, Issue 97, 2019, Page(s) 44-60, ISSN 0933-3657
Publisher: Elsevier BV
DOI: 10.1016/j.artmed.2018.10.007

Fully automated breast boundary and pectoral muscle segmentation in mammograms

Author(s): Andrik Rampun, Philip J. Morrow, Bryan W. Scotney, John Winder
Published in: Artificial Intelligence in Medicine, Issue 79, 2017, Page(s) 28-41, ISSN 0933-3657
Publisher: Elsevier BV
DOI: 10.1016/j.artmed.2017.06.001

DESIREE Project. Web-based software ecosystem for the personalized, collaborative and multidisciplinary management of primary breast cancer

Author(s): Muro Amuchastegui, Naiara; Larburu Rubio, Nekane
Published in: POSTER, Issue 1, 2018
Publisher: ONCO EMERGENCE FORUM 2018
DOI: 10.5281/zenodo.1486626

DESIREE DEMO - a web-based software ecosystem for the personalized, collaborative and multidisciplinary management of primary breast cancer

Author(s): Larburu, Nekane; Muro, Naiara; Macía, Iván
Published in: Issue 2, 2019
Publisher: 32th IEEE International Symposium on Computer-Based Medical Systems (IEEE CBMS2019)
DOI: 10.5281/zenodo.3353636

DESIREE - Decision Support and Information Management System for Breast Cancer

Author(s): Azpíroz Puente, Marina
Published in: Issue 1, 2016
Publisher: 35th Congress of Spanish Society of Senology and Mammary Pathology (SESPM 2016)
DOI: 10.5281/zenodo.1466892

Clinical study and multiscale modeling to predict the esthetic outcome of Breast Conservative Therapy

Author(s): Salmon, Remi; Nguyen, Thanh Chau; Lesage, Anne-Cecile; Bass, Barbara L; Garbey, Marc
Published in: Issue 1, 2017
Publisher: 10th Anniversary Multiscale Modeling Consortium Meeting (IMAG)
DOI: 10.5281/zenodo.804603

Predictive Multiscale Modeling For Breast Conserving Therapy

Author(s): Salmon, Remi; Nguyen, Thanh Chau; Lesage, Anne-Cecile; Garbey, Marc
Published in: Issue 1, 2016
Publisher: 6th Annual International Conference in Computational Surgery (Cosine 6)
DOI: 10.5281/zenodo.803986

Augmenting Guideline-Based CDSS with Experts' Knowledge

Author(s): Larburu Nekane; Muro Naiara; Macia Ivan; Sanchez Eider; Wang Hui; Winder John; Bouaud Jacques; Seroussi Brigitte
Published in: Issue 1, 2017
Publisher: 10th International Conference on Health Informatics (HEALTHINF2017)
DOI: 10.5281/zenodo.802888

Multiscale modelling and decision support applied to breast cancer management - Overview of DESIREE project

Author(s): Macia, Ivan
Published in: Issue 4, 2016
Publisher: 6th Annual International Conference in Computational Surgery (Cosine 6)
DOI: 10.5281/zenodo.884359

DESIREE Decision Support and Information System for Breast Cancer

Author(s): Macia, Ivan
Published in: Issue 3, 2016
Publisher: eHealthWeek16 - Speakers' Corner
DOI: 10.5281/zenodo.884173

The Clinician's Perspective: What do we need?

Author(s): Bass, Barbara L.
Published in: Issue 3, 2016
Publisher: 6th Annual International Conference in Computational Surgery (Cosine 6)
DOI: 10.5281/zenodo.884409

Image based breast and tumour characterization WP3 - ANALYZE

Author(s): Winder, John; Wang, Hui; Morrow, Philip; Scotney, Bryan; Maclair, Gregory; Macia, Ivan
Published in: Issue 3, 2016
Publisher: 6th Annual International Conference in Computational Surgery (Cosine 6)
DOI: 10.5281/zenodo.884413

Implementation of Decision Support Methods and Tools in the Management of Breast Cancer Patients

Author(s): Séroussi, Brigitte; Bouaud, Jacques
Published in: Issue 3, 2016
Publisher: 6th Annual International Conference in Computational Surgery (Cosine 6)
DOI: 10.5281/zenodo.884421

Development of an Advanced Clinical Decision Support System: Enriching the Guideline-Based Knowledge with Experience

Author(s): Muro Amuchastegui, Naiara
Published in: Not part of the Proceedings, Issue 2, 2017
Publisher: 16th Conference on Artificial Intelligence in Medicine (AIME 2017), 21-24 June 2017
DOI: 10.5281/zenodo.996210

Sistemas Avanzados de Soporte a la Decisión Clínica mas allá de las Guías Clínicas

Author(s): Larburu, Nekane; Muro, Naiara
Published in: Not part of the Proceedings (Presentation), Issue 1, 2017
Publisher: Congreso Europeo de Salud Digital: Innovando para avanzar, 15-16 June 2017
DOI: 10.5281/zenodo.996171

Modélisations duales d'une ontologie et de règles pour la représentation des connaissances: application à la prise en charge du cancer du sein dans le projet européen DESIREE.

Author(s): Bouaud, Jacques; Guezennec, Gilles; Séroussi, Brigitte
Published in: Not part of the Proceedings (Presentation), Issue 1, 2017
Publisher: Intelligence Artificielle (PFIA 2017)
DOI: 10.5281/zenodo.997990

Case-Based Decision Support System with Contextual Bandits Learning for Similarity Retrieval Model Selection

Author(s): Booma Devi Sekar, Hui Wang
Published in: Knowledge Science, Engineering and Management - 11th International Conference, KSEM 2018, Changchun, China, August 17–19, 2018, Proceedings, Part I, Issue 11061, 2018, Page(s) 426-432, ISBN 978-3-319-99364-5
Publisher: Springer International Publishing
DOI: 10.1007/978-3-319-99365-2_37

Advanced Image Processing Algorithms for Breast Cancer Decision Support and Information Management System

Author(s): M. Inmaculada García, Karen López-Linares, Andrik Rampun, Bryan W. Scotney, Philip J. Morrow, Remi Salmon, Marc Garbey, Stefan Audersch, Marina Azpíroz, Juan A. Romero, Vicente Belloch, José M. Santabárbara, Ivan Macia
Published in: Innovation in Medicine and Healthcare Systems, and Multimedia - Proceedings of KES-InMed-19 and KES-IIMSS-19 Conferences, Issue 145, 2019, Page(s) 147-156, ISBN 978-981-13-8565-0
Publisher: Springer Singapore
DOI: 10.1007/978-981-13-8566-7_14

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