Microbiology of extremely acidic terrestrial volcanic ecosystems

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Pubblicazioni

Methylacidimicrobium thermophilum AP8, a Novel Methane- and Hydrogen-Oxidizing Bacterium Isolated From Volcanic Soil on Pantelleria Island, Italy

Autori: Nunzia Picone, Pieter Blom, Anna J. Wallenius, Carmen Hogendoorn, Rob Mesman, Geert Cremers, Antonina L. Gagliano, Walter D’Alessandro, Paola Quatrini, Mike S. M. Jetten, Arjan Pol, Huub J. M. Op den Camp
Pubblicato in: Frontiers in Microbiology, Numero 12, 2021, ISSN 1664-302X
Editore: Frontiers Media
DOI: 10.3389/fmicb.2021.637762

Methanol production by Methylacidiphilum fumariolicum SolV under different growth conditions

Autori: Carmen Hogendoorn, Arjan Pol, Guylaine H. L. Nuijten, Huub J. M. Op den Camp
Pubblicato in: Applied and Environmental Microbiology, 2020, ISSN 0099-2240
Editore: American Society for Microbiology
DOI: 10.1128/aem.01188-20

Nutrient Limitation Causes Differential Expression of Transport- and Metabolism Genes in the Compartmentalized Anammox Bacterium Kuenenia stuttgartiensis

Autori: Marjan J. Smeulders, Stijn H. Peeters, Theo van Alen, Daan de Bruijckere, Guylaine H. L. Nuijten, Huub J. M. op den Camp, Mike S. M. Jetten, Laura van Niftrik
Pubblicato in: Frontiers in Microbiology, Numero 11, 2020, ISSN 1664-302X
Editore: Frontiers Media
DOI: 10.3389/fmicb.2020.01959

The thermoacidophilic methanotroph Methylacidiphilum fumariolicum SolV oxidizes subatmospheric H2 with a high-affinity, membrane-associated [NiFe] hydrogenase

Autori: Rob A. Schmitz, Arjan Pol, Sepehr S. Mohammadi, Carmen Hogendoorn, Antonie H. van Gelder, Mike S. M. Jetten, Lena J. Daumann, Huub J. M. Op den Camp
Pubblicato in: The ISME Journal, Numero 14/5, 2020, Pagina/e 1223-1232, ISSN 1751-7362
Editore: Nature Publishing Group
DOI: 10.1038/s41396-020-0609-3

Diversity of isoprene-degrading bacteria in phyllosphere and soil communities from a high isoprene-emitting environment: a Malaysian oil palm plantation

Autori: Ornella Carrión, Lisa Gibson, Dafydd M. O. Elias, Niall P. McNamara, Theo A. van Alen, Huub J. M. Op den Camp, Christina Vimala Supramaniam, Terry J. McGenity, J. Colin Murrell
Pubblicato in: Microbiome, Numero 8/1, 2020, ISSN 2049-2618
Editore: Springer Nature
DOI: 10.1186/s40168-020-00860-7

Key Physiology of a Nitrite-Dependent Methane-Oxidizing Enrichment Culture

Autori: Simon Guerrero-Cruz, Karin Stultiens, Maartje A. H. J. van Kessel, Wouter Versantvoort, Mike S. M. Jetten, Huub J. M. Op den Camp, Boran Kartal
Pubblicato in: Applied and Environmental Microbiology, Numero 85/8, 2019, ISSN 0099-2240
Editore: American Society for Microbiology
DOI: 10.1128/aem.00124-19

Verrucomicrobial methanotrophs: ecophysiology of metabolically versatile acidophiles

Autori: Rob A Schmitz, Stijn H Peeters, Wouter Versantvoort, Nunzia Picone, Arjan Pol, Mike S M Jetten, Huub J M Op den Camp
Pubblicato in: FEMS Microbiology Reviews, 2021, ISSN 1574-6976
Editore: Oxford University Press
DOI: 10.1093/femsre/fuab007

Ammonia oxidation at pH 2.5 by a new gammaproteobacterial ammonia-oxidizing bacterium

Autori: Nunzia Picone, Arjan Pol, Rob Mesman, Maartje A. H. J. van Kessel, Geert Cremers, Antonie H. van Gelder, Theo A. van Alen, Mike S. M. Jetten, Sebastian Lücker, Huub J. M. Op den Camp
Pubblicato in: The ISME Journal, 2020, ISSN 1751-7362
Editore: Nature Publishing Group
DOI: 10.1038/s41396-020-00840-7

Draft Genome Sequences of Two Acidophilic, Mesophilic Verrucomicrobial Methanotrophs Contain Only One pmoCAB Operon

Autori: Geert Cremers, Arjan Pol, Mike S. M. Jetten, Huub J. M. Op den Camp
Pubblicato in: Microbiology Resource Announcements, Numero 9/16, 2020, ISSN 2576-098X
Editore: ASM
DOI: 10.1128/mra.00315-20

Characterization of a novel cytochrome c as the electron acceptor of XoxF-MDH in the thermoacidophilic methanotroph Methylacidiphilum fumariolicum SolV

Autori: Wouter Versantvoort, Arjan Pol, Lena J. Daumann, James A. Larrabee, Aidan H. Strayer, Mike S.M. Jetten, Laura van Niftrik, Joachim Reimann, Huub J.M. Op den Camp
Pubblicato in: Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, Numero 1867/6, 2019, Pagina/e 595-603, ISSN 1570-9639
Editore: Elsevier BV
DOI: 10.1016/j.bbapap.2019.04.001

Complete Genome Sequence of the Aerobic Facultative Methanotroph Methylocella tundrae Strain T4

Autori: Martine A. R. Kox, Muhammad Farhan Ul Haque, Theo A. van Alen, Andrew T. Crombie, Mike S. M. Jetten, Huub J. M. Op den Camp, Svetlana N. Dedysh, Maartje A. H. J. van Kessel, J. Colin Murrell
Pubblicato in: Microbiology Resource Announcements, Numero 8/20, 2019, ISSN 2576-098X
Editore: ASM
DOI: 10.1128/mra.00286-19

Hydrogen and Carbon Monoxide-Utilizing Kyrpidia spormannii Species From Pantelleria Island, Italy

Autori: Carmen Hogendoorn, Arjan Pol, Nunzia Picone, Geert Cremers, Theo A. van Alen, Antonina L. Gagliano, Mike S. M. Jetten, Walter D’Alessandro, Paola Quatrini, Huub J. M. Op den Camp
Pubblicato in: Frontiers in Microbiology, Numero 11, 2020, ISSN 1664-302X
Editore: Frontiers Media
DOI: 10.3389/fmicb.2020.00951

Diversity, enrichment, and genomic potential of anaerobic methane- and ammonium-oxidizing microorganisms from a brewery wastewater treatment plant

Autori: Karin Stultiens, Maartje A.H.J. van Kessel, Jeroen Frank, Peter Fischer, Chris Pelzer, Theo A. van Alen, Boran Kartal, Huub J.M. Op den Camp, Mike S.M. Jetten
Pubblicato in: Applied Microbiology and Biotechnology, Numero 104/16, 2020, Pagina/e 7201-7212, ISSN 0175-7598
Editore: Springer Verlag
DOI: 10.1007/s00253-020-10748-z

Structure of the 4-hydroxy-tetrahydrodipicolinate synthase from the thermoacidophilic methanotroph Methylacidiphilum fumariolicum SolV and the phylogeny of the aminotransferase pathway

Autori: Rob A. Schmitz, Andreas Dietl, Melanie Müller, Tom Berben, Huub J. M. Op den Camp, Thomas R. M. Barends
Pubblicato in: Acta Crystallographica Section F Structural Biology Communications, Numero 76/5, 2020, Pagina/e 199-208, ISSN 2053-230X
Editore: John Wiley and Sons Ltd
DOI: 10.1107/s2053230x20005294

More Than a Methanotroph: A Broader Substrate Spectrum for Methylacidiphilum fumariolicum SolV

Autori: Nunzia Picone, Sepehr S. Mohammadi, Annemiek C. Waajen, Theo A. van Alen, Mike S. M. Jetten, Arjan Pol, Huub J. M. Op den Camp
Pubblicato in: Frontiers in Microbiology, Numero 11, 2020, ISSN 1664-302X
Editore: Frontiers Media
DOI: 10.3389/fmicb.2020.604485

Interactions between anaerobic ammonium- and methane-oxidizing microorganisms in a laboratory-scale sequencing batch reactor

Autori: Karin Stultiens, Simon Guerrero Cruz, Maartje A. H. J. van Kessel, Mike S. M. Jetten, Boran Kartal, Huub J. M. Op den Camp
Pubblicato in: Applied Microbiology and Biotechnology, Numero 103/16, 2019, Pagina/e 6783-6795, ISSN 0175-7598
Editore: Springer Verlag
DOI: 10.1007/s00253-019-09976-9

Metagenomic profiling of ammonia- and methane-oxidizing microorganisms in two sequential rapid sand filters

Autori: Lianna Poghosyan, Hanna Koch, Jeroen Frank, Maartje A.H.J. van Kessel, Geert Cremers, Theo van Alen, Mike S.M. Jetten, Huub J.M. Op den Camp, Sebastian Lücker
Pubblicato in: Water Research, Numero 185, 2020, Pagina/e 116288, ISSN 0043-1354
Editore: Elsevier BV
DOI: 10.1016/j.watres.2020.116288

Understanding the chemistry of the artificial electron acceptors PES, PMS, DCPIP and Wurster’s Blue in methanol dehydrogenase assays

Autori: Bérénice Jahn, Niko S. W. Jonasson, Hurina Hu, Helena Singer, Arjan Pol, Nathan M. Good, Huub J. M. Op den Camp, N. Cecilia Martinez-Gomez, Lena J. Daumann
Pubblicato in: JBIC Journal of Biological Inorganic Chemistry, Numero 25/2, 2020, Pagina/e 199-212, ISSN 0949-8257
Editore: Springer Verlag
DOI: 10.1007/s00775-020-01752-9

Resolving the complete genome of Kuenenia stuttgartiensis from a membrane bioreactor enrichment using Single-Molecule Real-Time sequencing

Autori: Jeroen Frank, Sebastian Lücker, Rolf H. A. M. Vossen, Mike S. M. Jetten, Richard J. Hall, Huub J. M. Op den Camp, Seyed Yahya Anvar
Pubblicato in: Scientific Reports, Numero 8/1, 2018, ISSN 2045-2322
Editore: Nature Publishing Group
DOI: 10.1038/s41598-018-23053-7

Bioreactor virome metagenomics sequencing using DNA spike-ins

Autori: Geert Cremers, Lavinia Gambelli, Theo van Alen, Laura van Niftrik, Huub J.M. Op den Camp
Pubblicato in: PeerJ, Numero 6, 2018, Pagina/e e4351, ISSN 2167-8359
Editore: PeerJ
DOI: 10.7717/peerj.4351

Mutations in SELENBP1, encoding a novel human methanethiol oxidase, cause extraoral halitosis

Autori: Arjan Pol, G. Herma Renkema, Albert Tangerman, Edwin G. Winkel, Udo F. Engelke, Arjan P. M. de Brouwer, Kent C. Lloyd, Renee S. Araiza, Lambert van den Heuvel, Heymut Omran, Heike Olbrich, Marijn Oude Elberink, Christian Gilissen, Richard J. Rodenburg, Jörn Oliver Sass, K. Otfried Schwab, Hendrik Schäfer, Hanka Venselaar, J. Silvia Sequeira, Huub J. M. Op den Camp, Ron A. Wevers
Pubblicato in: Nature Genetics, Numero 50/1, 2018, Pagina/e 120-129, ISSN 1061-4036
Editore: Nature Publishing Group
DOI: 10.1038/s41588-017-0006-7

Bacterial SBP56 identified as a Cu-dependent methanethiol oxidase widely distributed in the biosphere

Autori: Özge Eyice, Nataliia Myronova, Arjan Pol, Ornella Carrión, Jonathan D Todd, Tom J Smith, Stephen J Gurman, Adam Cuthbertson, Sophie Mazard, Monique ASH Mennink-Kersten, Timothy DH Bugg, Karl Kristoffer Andersson, Andrew WB Johnston, Huub JM Op den Camp, Hendrik Schäfer
Pubblicato in: The ISME Journal, Numero 12/1, 2017, Pagina/e 145-160, ISSN 1751-7362
Editore: Nature Publishing Group
DOI: 10.1038/ismej.2017.148

Facile Arsenazo III-Based Assay for Monitoring Rare Earth Element Depletion from Cultivation Media for Methanotrophic and Methylotrophic Bacteria

Autori: Carmen Hogendoorn, Paula Roszczenko-Jasińska, N. Cecilia Martinez-Gomez, Johann de Graaff, Patrick Grassl, Arjan Pol, Huub J. M. Op den Camp, Lena J. Daumann
Pubblicato in: Applied and Environmental Microbiology, Numero 84/8, 2018, ISSN 0099-2240
Editore: American Society for Microbiology
DOI: 10.1128/AEM.02887-17

Ammonia Oxidation and Nitrite Reduction in the Verrucomicrobial Methanotroph Methylacidiphilum fumariolicum SolV

Autori: Sepehr S. Mohammadi, Arjan Pol, Theo van Alen, Mike S. M. Jetten, Huub J. M. Op den Camp
Pubblicato in: Frontiers in Microbiology, Numero 8, 2017, ISSN 1664-302X
Editore: Frontiers Media
DOI: 10.3389/fmicb.2017.01901

Mimicking microbial interactions under nitrate-reducing conditions in an anoxic bioreactor: enrichment of novel Nitrospirae bacteria distantly related to Thermodesulfovibrio

Autori: Arslan Arshad, Paula Dalcin Martins, Jeroen Frank, Mike S. M. Jetten, Huub J. M. Op den Camp, Cornelia U. Welte
Pubblicato in: Environmental Microbiology, Numero 19/12, 2017, Pagina/e 4965-4977, ISSN 1462-2912
Editore: Blackwell Publishing Inc.
DOI: 10.1111/1462-2920.13977

Autori: Bérénice Jahn, Arjan Pol, Henning Lumpe, Thomas R. M. Barends, Andreas Dietl, Carmen Hogendoorn, Huub J. M. Op den Camp, Lena J. Daumann
Pubblicato in: ChemBioChem, Numero 19/11, 2018, Pagina/e 1147-1153, ISSN 1439-4227
Editore: John Wiley & Sons Ltd.
DOI: 10.1002/cbic.201800130

Impact of the lanthanide contraction on the activity of a lanthanide-dependent methanol dehydrogenase – a kinetic and DFT study

Autori: Henning Lumpe, Arjan Pol, Huub J. M. Op den Camp, Lena J. Daumann
Pubblicato in: Dalton Transactions, Numero 47/31, 2018, Pagina/e 10463-10472, ISSN 1477-9226
Editore: Royal Society of Chemistry
DOI: 10.1039/c8dt01238e

Current perspectives on the application of N-damo and anammox in wastewater treatment

Autori: Maartje AHJ van Kessel, Karin Stultiens, Monique FW Slegers, Simon Guerrero Cruz, Mike SM Jetten, Boran Kartal, Huub JM Op den Camp
Pubblicato in: Current Opinion in Biotechnology, Numero 50, 2018, Pagina/e 222-227, ISSN 0958-1669
Editore: Elsevier BV
DOI: 10.1016/j.copbio.2018.01.031

Comparative Genomics of Candidatus Methylomirabilis Species and Description of Ca. Methylomirabilis Lanthanidiphila

Autori: Wouter Versantvoort, Simon Guerrero-Cruz, Daan R. Speth, Jeroen Frank, Lavinia Gambelli, Geert Cremers, Theo van Alen, Mike S. M. Jetten, Boran Kartal, Huub J. M. Op den Camp, Joachim Reimann
Pubblicato in: Frontiers in Microbiology, Numero 9, 2018, ISSN 1664-302X
Editore: Frontiers Media
DOI: 10.3389/fmicb.2018.01672

Community Composition and Ultrastructure of a Nitrate-Dependent Anaerobic Methane-Oxidizing Enrichment Culture

Autori: Lavinia Gambelli, Simon Guerrero-Cruz, Rob J. Mesman, Geert Cremers, Mike S. M. Jetten, Huub J. M. Op den Camp, Boran Kartal, Claudia Lueke, Laura van Niftrik
Pubblicato in: Applied and Environmental Microbiology, Numero 84/3, 2018, ISSN 0099-2240
Editore: American Society for Microbiology
DOI: 10.1128/AEM.02186-17

Nitrate- and nitrite-dependent anaerobic oxidation of methane

Autori: Cornelia U. Welte, Olivia Rasigraf, Annika Vaksmaa, Wouter Versantvoort, Arslan Arshad, Huub J.M. Op den Camp, Mike S.M. Jetten, Claudia Lüke, Joachim Reimann
Pubblicato in: Environmental Microbiology Reports, Numero 8/6, 2016, Pagina/e 941-955, ISSN 1758-2229
Editore: Wiley-Blackwell
DOI: 10.1111/1758-2229.12487

New Methyloceanibacter diversity from North Sea sediments includes methanotroph containing solely the soluble methane monooxygenase

Autori: Bram Vekeman, Frederiek-Maarten Kerckhof, Geert Cremers, Paul de Vos, Peter Vandamme, Nico Boon, Huub J.M. Op den Camp, Kim Heylen
Pubblicato in: Environmental Microbiology, Numero 18/12, 2016, Pagina/e 4523-4536, ISSN 1462-2912
Editore: Blackwell Publishing Inc.
DOI: 10.1111/1462-2920.13485

Ultrastructure and Viral Metagenome of Bacteriophages from an Anaerobic Methane Oxidizing Methylomirabilis Bioreactor Enrichment Culture

Autori: Lavinia Gambelli, Geert Cremers, Rob Mesman, Simon Guerrero, Bas E. Dutilh, Mike S. M. Jetten, Huub J. M. Op den Camp, Laura van Niftrik
Pubblicato in: Frontiers in Microbiology, Numero 7, 2016, ISSN 1664-302X
Editore: Frontiers Media
DOI: 10.3389/fmicb.2016.01740

Methylacidiphilum fumariolicum SolV, a thermoacidophilic ‘Knallgas’ methanotroph with both an oxygen-sensitive and -insensitive hydrogenase

Autori: Sepehr Mohammadi, Arjan Pol, Theo A van Alen, Mike SM Jetten, Huub JM Op den Camp
Pubblicato in: The ISME Journal, Numero 11/4, 2016, Pagina/e 945-958, ISSN 1751-7362
Editore: Nature Publishing Group
DOI: 10.1038/ismej.2016.171

Draft Genome Sequence of a Novel Methylobacterium brachiatum Strain Isolated from Human Skin

Autori: Geert Cremers, Angelique Kenyon, Niels Gubbels, Matthijs Jansen, Theo A. van Alen, Tom Berben, Huub J. M. Op den Camp
Pubblicato in: Microbiology Resource Announcements, Numero 9/50, 2020, ISSN 2576-098X
Editore: American Society for Microbiology
DOI: 10.1128/mra.01093-20

Response of the Anaerobic Methanotroph “ Candidatus Methanoperedens nitroreducens” to Oxygen Stress

Autori: Simon Guerrero-Cruz, Geert Cremers, Theo A. van Alen, Huub J. M. Op den Camp, Mike S. M. Jetten, Olivia Rasigraf, Annika Vaksmaa
Pubblicato in: Applied and Environmental Microbiology, Numero 84/24, 2018, ISSN 0099-2240
Editore: American Society for Microbiology
DOI: 10.1128/aem.01832-18

Draft genome of a novel methanotrophic Methylobacter sp. from the volcanic soils of Pantelleria Island

Autori: Carmen Hogendoorn, Nunzia Picone, Femke van Hout, Sophie Vijverberg, Lianna Poghosyan, Theo A. van Alen, Jeroen Frank, Arjan Pol, Antonia L. Gagliano, Mike S. M. Jetten, Walter D’Alessandro, Paola Quatrini, Huub J. M. Op den Camp
Pubblicato in: Antonie van Leeuwenhoek, Numero 114/3, 2021, Pagina/e 313-324, ISSN 0003-6072
Editore: Kluwer Academic Publishers
DOI: 10.1007/s10482-021-01525-7

Role of rare earth elements in methanol oxidation

Autori: Nunzia Picone, Huub JM Op den Camp
Pubblicato in: Current Opinion in Chemical Biology, Numero 49, 2019, Pagina/e 39-44, ISSN 1367-5931
Editore: Elsevier BV
DOI: 10.1016/j.cbpa.2018.09.019

The Acidophilic Methanotroph Methylacidimicrobium tartarophylax 4AC Grows as Autotroph on H2 Under Microoxic Conditions

Autori: Sepehr S. Mohammadi, Rob A. Schmitz, Arjan Pol, Tom Berben, Mike S. M. Jetten, Huub J. M. Op den Camp
Pubblicato in: Frontiers in Microbiology, Numero 10, 2019, ISSN 1664-302X
Editore: Frontiers Media
DOI: 10.3389/fmicb.2019.02352

Geothermal Gases Shape the Microbial Community of the Volcanic Soil of Pantelleria, Italy

Autori: Nunzia Picone, Carmen Hogendoorn, Geert Cremers, Lianna Poghosyan, Arjan Pol, Theo A. van Alen, Antonina L. Gagliano, Walter D’Alessandro, Paola Quatrini, Mike S. M. Jetten, Huub J. M. Op den Camp, Tom Berben
Pubblicato in: mSystems, Numero 5/6, 2020, Pagina/e 1-17, ISSN 2379-5077
Editore: American Society for Microbiology
DOI: 10.1128/msystems.00517-20

Interactions of anaerobic ammonium oxidizers and sulfide-oxidizing bacteria in a substrate-limited model system mimicking the marine environment

Autori: Lina Russ, Theo A van Alen, Mike S M Jetten, Huub J M Op den Camp, Boran Kartal
Pubblicato in: FEMS Microbiology Ecology, Numero 95/9, 2019, ISSN 1574-6941
Editore: FEMS
DOI: 10.1093/femsec/fiz137

Electrocatalysis of a Europium‐Dependent Bacterial Methanol Dehydrogenase with Its Physiological Electron‐Acceptor Cytochrome c GJ

Autori: Palraj Kalimuthu, Lena J. Daumann, Arjan Pol, Huub J. M. Op den Camp, Paul V. Bernhardt
Pubblicato in: Chemistry – A European Journal, 2019, ISSN 0947-6539
Editore: John Wiley & Sons Ltd.
DOI: 10.1002/chem.201900525

Multiheme hydroxylamine oxidoreductases produce NO during ammonia oxidation in methanotrophs

Autori: Wouter Versantvoort, Arjan Pol, Mike S. M. Jetten, Laura van Niftrik, Joachim Reimann, Boran Kartal, Huub J. M. Op den Camp
Pubblicato in: Proceedings of the National Academy of Sciences, Numero 117/39, 2020, Pagina/e 24459-24463, ISSN 0027-8424
Editore: National Academy of Sciences
DOI: 10.1073/pnas.2011299117

Several ways one goal—methanogenesis from unconventional substrates

Autori: Julia M. Kurth, Huub J. M. Op den Camp, Cornelia U. Welte
Pubblicato in: Applied Microbiology and Biotechnology, Numero 104/16, 2020, Pagina/e 6839-6854, ISSN 0175-7598
Editore: Springer Verlag
DOI: 10.1007/s00253-020-10724-7

Growth on Carbohydrates from Carbonaceous Meteorites Alters the Immunogenicity of Environment-Derived Bacterial Pathogens

Autori: Jorge Domínguez-Andrés, Marc Eleveld, Georgios Renieris, Thomas J. Boltje, Rob J. Mesman, Laura van Niftrik, Sam J. Moons, Petra Rettberg, Jos W.M. van der Meer, Evangelos J. Giamarellos-Bourboulis, Huub J.M. Op den Camp, Marien I. de Jonge, Mihai G. Netea
Pubblicato in: Astrobiology, 2020, ISSN 1531-1074
Editore: Mary Ann Liebert Inc.
DOI: 10.1089/ast.2019.2173

Autotrophic microorganisms in acidic volcanic ecosystems

Autori: Carmen Hogendoorn
Pubblicato in: 2020
Editore: Ridderprint

Novel methane- and ammonia-oxidizing microorganisms from acidic environments

Autori: Nunzia Picone
Pubblicato in: 2020
Editore: Proefschriftmaken.nl

One-carbon and hydrogen metabolsim of acidophilic verrucomicrobial methanotrophs

Autori: Seyed Sepehr Mohammadi
Pubblicato in: 2017, ISBN 978-94-028-0468-3
Editore: Ipskamp Printing

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