Resultado final
Documentation on metadata standards for inclusion of resources in data portalLead beneficiary is TAUFSD an affiliated entity of CESSDA ERIC
D8.1.1 Project Handbook initial release and periodic updatesInitial version of the Project Handbook following Open PM2 best practices ELIXIR Hub
D8.4: BY-COVID Policy Brief I: Open data to support European pandemic preparednessBY-COVID, being funded under the Horizon Europe programme, will deliver 2 policy briefs as deliverables, one at M20 and one at M36. WP8 will coordinate the delivery of two BY-COVID policy briefs
D7.1 Dissemination, exploitation and communication PlanMandatory deliverable highlighting the Dissemination Exploitation and Communication Plan ELIXIR Hub
D3.2 Tiered indexing systemImplementation of cloudbased high performance scalable indexing system EMBLEBI
D2.2. Data Access and Transfer across research domains and jurisdictionsReport describing technical legal and organisational barriers across data sources and identified solutions for data access including the procedures to manage users permissions for controlled access dataLead beneficiary is CRG an affiliated entity of BSC
D8.1.2 Project Handbook initial release and periodic updates.Initial version of the Project Handbook following Open PM2 best practices ELIXIR Hub
D2.1 Initial data and metadata harmonisation at domain level to enable fast responses to COVID-19Report describing the initial infrastructure setup to enable COVID19 data access and transfer as well as the intradomain harmonisation for WP data sources Lead beneficiary is UNottingham an affiliated entity of BBMRIERIC
D1.1 Extended workflowsDetails of the first wave of extensions and developments upon viral data processing computational workflows operating within the SARSCoV2 Data Hubs
Publicaciones
Autores:
Goble, Carole; Soiland-Reyes, Stian
Publicado en:
ZENODO, 2022
Editor:
Zenodo
DOI:
10.5281/zenodo.7147703
Autores:
Ramon; Delphine; Allyson; Milo; Susanna-Assunta
Publicado en:
FAIRsharing, 2022
Editor:
Zenodo
DOI:
10.5281/zenodo.7064637
Autores:
Stian Soiland-Reyes; Leyla Jael Castro; Daniel Garijo; Marc Portier; Carole Goble; Paul Groth
Publicado en:
RIO, 2022
Editor:
Zenodo
DOI:
10.5281/zenodo.7256428
Autores:
Paul De Geest; Frederik Coppens; Ignacio Eguinoa; Stian Soiland-Reyes; Simone Leo
Publicado en:
GALAXY TRAINING, 2023
Editor:
Zenodo
DOI:
10.5281/zenodo.7257146
Autores:
Justin Clark-Casey; Stian Soiland-Reyes
Publicado en:
ELIXIR, 2022
Editor:
Zenodo
DOI:
10.5281/zenodo.7323480
Autores:
Braukmann, Ricarda
Publicado en:
DANS, 2023
Editor:
Zenodo
DOI:
10.5281/zenodo.7867780
Autores:
Stian Soiland-Reyes; Peter Sefton; Leyla Jael Castro; Frederik Coppens; Daniel Garijo; Simone Leo; Marc Portier; Paul Groth; Carole Goble
Publicado en:
MANCHESTER 1824, 2022
Editor:
Zenodo
DOI:
10.5281/zenodo.7243110
Autores:
Mark D. Wilkinson; Susanna-Assunta Sansone; Eva Méndez; Romain David; Richard Dennis; David Hecker; Mari Kleemola; Carlo Lacagnina; Anastasija Nikiforova; Leyla Jael Castro
Publicado en:
Open Research Europe, 2022, ISSN 2732-5121
Editor:
European commission
DOI:
10.12688/openreseurope.15364.1
Autores:
Ryan Connor, David A. Yarmosh, Wolfgang Maier, Migun Shakya, Ross Martin, Rebecca Bradford, J. Rodney Brister, Patrick SG Chain, Courtney A. Copeland, Julia di Iulio, Bin Hu, Philip Ebert, Jonathan Gunti, Yumi Jin, Kenneth S. Katz, Andrey Kochergin, Tré L
Publicado en:
bioRxiv, 2022, ISSN 2692-8205
Editor:
bioRxiv
DOI:
10.1101/2022.11.03.515010
Autores:
István Csabai, Krisztián Papp, Dávid Visontai et al.
Publicado en:
Research Square, Edición V1, 2021, ISSN 2693-5015
Editor:
Research Square
DOI:
10.21203/rs.3.rs-1177047/v1
Autores:
Anikó Mentes, Krisztián Papp, Dávid Visontai, József Stéger, VEO Technical Working Group, István Csabai, Anna Medgyes-Horváth & Orsolya Anna Pipek
Publicado en:
Scientific Reports, Edición 12, 2022, ISSN 2045-2322
Editor:
Springer Nature
DOI:
10.1038/s41598-022-21953-3
Autores:
Reagon Karki, Yojana Gadiya, Andrea Zaliani, Philip Gribbon
Publicado en:
Bioinformatics Advances, Edición 3 (1), 2023, ISSN 2635-0041
Editor:
Oxford University Press
DOI:
10.1093/bioadv/vbad045
Autores:
Istvan Csabai, Norbert Solymosi
Publicado en:
Research Square, 2022, ISSN 2693-5015
Editor:
Research Square
DOI:
10.21203/rs.3.rs-1330800/v1
Autores:
Fábio Madeira, Matt Pearce, Adrian R N Tivey, Prasad Basutkar, Joon Lee, Ossama Edbali, Nandana Madhusoodanan, Anton Kolesnikov, Rodrigo Lopez
Publicado en:
Nucleic Acids Research, Edición 50, 2022, ISSN 1362-4962
Editor:
Oxford Academic
DOI:
10.1093/nar/gkac240
Autores:
Soiland-Reyes S, Castro LJ, Garijo D, Portier M, Goble C, Groth P
Publicado en:
Research Ideas and Outcomes, 2022, ISSN 2367-7163
Editor:
Pensoft Publishers
DOI:
10.3897/rio.8.e94501
Autores:
Wittner, R., Mascia, C., Gallo, M. et al.
Publicado en:
Scientific Data, 2022, ISSN 2052-4463
Editor:
Springer Nature
DOI:
10.1038/s41597-022-01537-6
Autores:
Rudolf Wittner, Petr Holub, Cecilia Mascia, Francesca Frexia, Heimo Müller, Markus Plass, Clare Allocca, Fay Betsou, Tony Burdett, Ibon Cancio, Adriane Chapman, Martin Chapman, et al.
Publicado en:
Learning Health Systems, 2023, ISSN 2379-6146
Editor:
Wiley
DOI:
10.1002/lrh2.10365
Autores:
Darren P. Martin, Spyros Lytras, Alexander G. Lucaci, Wolfgang Maier, Björn Grüning, Stephen D. Shank, Steven Weaver, Oscar A. MacLean, Richard J. Orton, Philippe Lemey, Maciej F. Boni, Houriiyah Tegally, Gordon W. Harkins, Cathrine Scheepers, Jinal N. Bh
Publicado en:
Molecular Biology and Evolution, Edición 39 (4), 2022, ISSN 1537-1719
Editor:
Oxford University Press
DOI:
10.1093/molbev/msac061
Autores:
Axel Abelein, Simone Ciofi-Baffoni, Cecilia Mörman, Rakesh Kumar, Andrea Giachetti, Mario Piccioli, and Henrik Biverstål
Publicado en:
JACS Au, Edición 2, 11, 2022, ISSN 2691-3704
Editor:
American Chemical Society
DOI:
10.1021/jacsau.2c00438
Autores:
Berg, Hannes et al.
Publicado en:
Angew Chem Int Ed Engl., Edición 63, 26, 2024, ISSN 1433-7851
Editor:
Wiley-VCH
DOI:
10.1002/anie.202205858
Autores:
Chiara, M., Horner, D.S., Ferrandi, E. et al.
Publicado en:
Communications biology, 2023, ISSN 2399-3642
Editor:
Springer Nature
DOI:
10.1038/s42003-023-04784-4
Autores:
Brack P, Crowther P, Soiland-Reyes S, Owen S, Lowe D, Williams AR, et al.
Publicado en:
PLoS Comput Biol, 2022, ISSN 1553-7358
Editor:
PLOS
DOI:
10.1371/journal.pcbi.1009823
Autores:
F. Bisognin, F. Messina, O. Butera, C. Nisii, A. Mazzarelli, S. Cristino, M. R. Pascale, G. Lombardi, A. Cannas, P. Dal Monte
Publicado en:
Microbiology Spectrum, Edición 10, 6, 2022, ISSN 2165-0497
Editor:
ASM Journals
DOI:
10.1128/spectrum.02893-22
Autores:
David, Romain; Richard, Audrey S.; Connellan, Claire; Lauer, Katharina B.; Chiusano, Maria Luisa; Goble, Carole; Houde, Martin; Kemmer, Isabel; Keppler, Antje; Lieutaud, Philippe; Ohmann, Christian; Panagiotopoulou, Maria; Raza Khan, Sara; Rybina, Arina; Soiland-Reyes, Stian; Wit, Charlotte; Wittner, Rudolf; Andrade Buono, Rafael; Marsh, Sarah Arnaud; Audergon, Pauline; Bonfils, Dylan; Carazo, Jose-Maria; Charrel, Remi; Coppens, Frederik; Fecke, Wolfgang; Filippone, Claudia; Garcia Alvarez, Eva; Gul, Sheraz; Hermjakob, Henning; Herzog, Katja; Holub, Petr; Kozera, Lukasz; Lister, Allyson L.; López-Coronado, José; Madon, Bénédicte; Majcen, Kurt; Martin, William; Müller, Wolfgang; Papadopoulou, Elli; Prat, Christine M.A.; Romano, Paolo; Sansone, Susanna-Assunta; Saunders, Gary; Blomberg, Niklas; Ewbank, Jonathan
Publicado en:
No Journal Title, 2023
Editor:
Zenodo
DOI:
10.5281/zenodo.7520086
Autores:
Meurisse, Marjan; Van Goethem, Nina; Estupiñán-Romero, Francisco; González-Galindo, Javier; Royo-Sierra, Santiago; Martínez Lizaga, Natalia; Bernal-Delgado, Enrique
Publicado en:
BEYOND COVID, 2023
Editor:
Zenodo
DOI:
10.5281/zenodo.7551182
Autores:
Lauer, Katharina; Smith, Andrew; Sousoni, Despoina; Westwick, Elaine; Martin, Corinne; Alloza Anguiano, Eva; David, Romain; Blomberg, Niklas
Publicado en:
By-covid, 2023
Editor:
Zenodo
DOI:
10.5281/zenodo.7186153
Autores:
Eržen, Ivan, Fafangel, Mario, Gabrovec, Branko, Selak, Špela, Skaza, Alenka, Vrdelja, Mitja
Publicado en:
Nacionalni inštitut za javno zdravje, 2022
Editor:
Nacionalni inštitut za javno zdravje
Autores:
Westwick, Elaine; Haskell, Erin; Martin, Corinne
Publicado en:
BEYOND COVID, 2022
Editor:
Zenodo
DOI:
10.5281/zenodo.6884870
Autores:
Nadim Rahman, Colman O’Cathail, Ahmad Zyoud, Alexey Sokolov, Bas Oude Munnink, Björn Grüning, Carla Cummins, Clara Amid, David Nieuwenhuijse, Dávid Visontai, David Yu Yuan, Dipayan Gupta, Divyae Prasad, Gábor Máté Gulyás, Gabriele Rinck, Jasmine McKinnon,
Publicado en:
bioRxiv, 2023
Editor:
bioRxiv
DOI:
10.1101/2023.04.19.537514
Autores:
Willems, Marieke; Taverner, Ellie
Publicado en:
BY-COVID, 2023
Editor:
Zenodo
DOI:
10.5281/zenodo.7789351
Autores:
García Álvarez, Eva; Mayrhofer, Michaela; Holub, Peter
Publicado en:
BEYOND COVID, 2021
Editor:
Zenodo
DOI:
10.5281/zenodo.6884816
Autores:
Cochrane, Guy; Amid, Clara
Publicado en:
BEYOND COVID, 2021
Editor:
Zenodo
DOI:
10.5281/zenodo.7875986
Autores:
Philippe Rocca-Serra; Wei Gu; Vassilios Ioannidis; Tooba Abbassi Daloii; Salvador Capella-Gutierrez; Ishwar Chandramouliswaran; Andrea Splendiani; Tony Burdett; Robert T. Giessmann; David Henderson; Dominique Batista; Allyson Lister; Ibrahim Emam; Yojana Gadiya; Lucas Giovanni; Egon Willighagen; Chris Evelo; Alasdair J. G. Gray; Philip Gribbon; Nick Juty; Danielle Welter; Karsten Quast; Paul Peeters; Herman van Vlijmen; Tom Plasterer; Dorothy Reilly; Eelke van der Horst; Susanna-Assunta Sansone; the FAIR Cookbook Recipes' Authors
Publicado en:
Scientific data, Edición 10, 2023
Editor:
Zenodo
DOI:
10.5281/zenodo.7156792
Autores:
Hermjakob, Henning; Kleemola, Mari; Moilanen, Katja; Tuominen, Markus; Sansone, Susanna-Assunta; Lister, Allyson; David, Romain; Panagiotopoulou, Maria; Ohmann, Christian; Belien, Jeroen; Lischke, Julia; Juty, Nick; Soiland-Reyes, Stian
Publicado en:
BEYOND COVID, 2022
Editor:
Zenodo
DOI:
10.5281/zenodo.7129553
Autores:
Estupiñán-Romero, Francisco; González-Galindo, Javier; Meurisse, Marjan; Martínez-Lizaga, Natalia; Royo-Sierra, Santiago; Van Goethem, Nina; Bernal-Delgado, Enrique
Publicado en:
BY-COVID, 2023
Editor:
Zenodo
DOI:
10.5281/zenodo.7871534
Autores:
Niklas Blomberg; Marieke Willems; Corinne S. Martin; Andy Smith; Elaine Harrison; Jose-Maria Carazo; Enrique Bernal-Delgado; Iris van Dam; Romain David; Patricia M. Palagi; Martina Draščić Capar
Publicado en:
BY-COVID, 2023
Editor:
Zenodo
DOI:
10.5281/zenodo.7940608
Autores:
Canham, Steve; Felder, Gerd; Ohmann, Christian; Panagiotopoulou, Maria
Publicado en:
BEYOND COVID, 2022
Editor:
Zenodo
DOI:
10.5281/zenodo.7064624
Autores:
Estupiñán-Romero, Francisco; Launa-Garcés, Ramón; Van Dam, Iris; Cosgrove, Shona; Van Goethem, Nina; Bernal-Delgado, Enrique
Publicado en:
Edición BEYOND COVID, 2023
Editor:
Zenodo
DOI:
10.5281/zenodo.7944195
Autores:
Arenas Marquez, Juan; Troncoso Quilaqueo, Andrea
Publicado en:
BEYOND COVID, 2021
Editor:
Zenodo
DOI:
10.5281/zenodo.6884734
Autores:
Hermjakob, Henning; Kleemola, Mari; Moilanen, Katja; Sansone, Susanna-Assunta; Lister, Allyson; David, Romain; Panagiotopoulou, Maria; Ohmann, Christian; Belien, Jeroen; Lischke, Julia; Juty, Nick; Soiland-Reyes, Stian
Publicado en:
BEYOND COVID, 2022
Editor:
Zenodo
DOI:
10.5281/zenodo.6885016
Autores:
Giles, Tom; Quinlan, Phil; Belien, Jeroen; Lischke, Julia; Portell-Silva, Laura; Capella-Gutierrez, Salvador; Karki, Reagon; Kalaitzi, Vasso; Bernal-Delgado, Enrique; Keppler, Antje
Publicado en:
BEYOND COVID, 2022
Editor:
Zenodo
DOI:
10.5281/zenodo.7017728
Autores:
Arend, Daniel, Sebastian Beier, laurent bouri, Marco Brandizi, Donald Hobern, Erwan Le Floch, Timo Mühlhaus, et al.
Publicado en:
BioHackrXiv Preprints, 2022
Editor:
Center for Open Science
DOI:
10.37044/osf.io/c724r
Autores:
Natalia Martínez-Lizaga; Marjan Meurisse; Francisco Estupiñan-Romero; Nina Van Goethem; Enrique Bernal-Delgado
Publicado en:
BY COVID, 2023
Editor:
Zenodo
DOI:
10.5281/zenodo.7625784
Autores:
Kemmer, Isabel; Keppler, Antje; Serrano-Solano, Beatriz; Rybina, Arina; Özdemir, Bugra; Bischof, Johanna; El Ghadraoui, Ayoub; Eriksson, John E.; Mathur, Aastha
Publicado en:
Histochemestry and Cell Biology, Edición 160, 2023, Página(s) 199-209
Editor:
Zenodo
DOI:
10.5281/zenodo.7788899
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