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HARNESSING THE POWER OF NATURE THROUGH PRODUCTIVE MICROBIAL CONSORTIA IN BIOTECHNOLOGY – MEASURE, MODEL, MASTER

Rezultaty

Running on-line single cell analysis platform

Running online single cell analysis platform

Quantitative MS-based metabolomics dataset

Quantitative MSbased metabolomics dataset

Connecting on-line single cell data with automatic evaluation pipelines

Connecting online single cell data with automatic evaluation pipelines

A set of optimized P. taiwanensis VLB 120 balancer strains with enhanced c-di-GMP levels.

A set of optimized P taiwanensis VLB 120 balancer strains with enhanced cdiGMP levels

NMR-environomics dataset

NMRenvironomics dataset

Meta-functional-environomics reconstruction of natural microbiome

Metafunctionalenvironomics reconstruction of natural microbiome

Characterization of microbial consortia from natural environments
A P. putida strain suitable as labor module including sucrose metabolism and lacking negative traits.

A P putida strain suitable as labor module including sucrose metabolism and lacking negative traits

Project branding and communication channels set-up and running (logo, promotional materials, website, templates, social media)

Project branding and communication channels setup and running logo promotional materials website templates social media

Publikacje

Development of an Automated Online Flow Cytometry Method to Quantify Cell Density and Fingerprint Bacterial Communities

Autorzy: Juan López-Gálvez, Konstanze Schiessl, Michael D. Besmer, Carmen Bruckmann, Hauke Harms, Susann Müller
Opublikowane w: Cells, Numer 12, 2023, Strona(/y) 1559, ISSN 2073-4409
Wydawca: MDPI
DOI: 10.3390/cells12121559

New strategy for bioplastic and exopolysaccharides production: Enrichment of field microbiomes with cyanobacteria

Autorzy: Beatriz Altamira-Algarra, Estel Rueda, Artai Lage, David San León, Juan F. Martínez-Blanch, Juan Nogales, Joan García, Eva Gonzalez-Flo
Opublikowane w: New Biotechnology, Numer 78, 2023, Strona(/y) 141-149, ISSN 1871-6784
Wydawca: Elsevier BV
DOI: 10.1016/j.nbt.2023.10.008

Monitoring PHB production in Synechocystis sp. with hyperspectral images

Autorzy: Francisco Rodríguez Lorenzo; Miguel Placer Lorenzo; Luz Herrero Castilla; Juan Antonio Álvarez Rodríguez; Sandra Iglesias; Santiago Gómez; Juan Manuel Fernández Montenegro; Estel Rueda; Rubén Diez-Montero; Joan Garcia; Eva Gonzalez-Flo
Opublikowane w: Water Science & Technology, 2022, ISSN 1996-9732
Wydawca: IWA Publishing
DOI: 10.2166/wst.2022.194

Novel approaches to energize microbial biocatalysts

Autorzy: Gonzalo Durante‐Rodríguez, Manuel Carmona, Eduardo Díaz
Opublikowane w: Environmental Microbiology, Numer 25, 2023, Strona(/y) 161-166, ISSN 1462-2912
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/1462-2920.16254

Toward merging bottom–up and top–down model-based designing of synthetic microbial communities

Autorzy: David San León & Juan Nogales
Opublikowane w: Current Opinion in Microbiology, 2022, ISSN 1369-5274
Wydawca: Elsevier BV
DOI: 10.1016/j.mib.2022.102169

Photosynthetic species composition determines bioplastics production in microbiomes: Strategy to enrich cyanobacteria PHB-producers

Autorzy: Beatriz Altamira-Algarra, Artai Lage, Joan García, Eva Gonzalez-Flo
Opublikowane w: Algal Research, Numer 79, 2024, Strona(/y) 103469, ISSN 2211-9264
Wydawca: Elsevier BV
DOI: 10.1016/j.algal.2024.103469

Exploiting synergies between microbial electrochemical technologies and synthetic biology

Autorzy: Bin Lai, Jens Krömer, Federico Aulenta, Hui Wu, Pablo Ivan Nikel
Opublikowane w: Microbial Biotechnology, Numer 16, 2023, Strona(/y) 485-488, ISSN 1751-7915
Wydawca: Wiley
DOI: 10.1111/1751-7915.14208

When microbial biotechnology meets material engineering

Autorzy: Ana M. Hernández-Arriaga, Cristina Campano, Virginia Rivero-Buceta, M. Auxiliadora Prieto
Opublikowane w: Microbial Biotechnology, 2022, ISSN 1751-7915
Wydawca: Willey
DOI: 10.1111/1751-7915.13975

A general deep hybrid model for bioreactor systems: Combining first principles with deep neural networks

Autorzy: José Pinto, Mykaella Mestre, J.Ramos, Rafael S.Costa, Gerald Striedner, RuiOliveira
Opublikowane w: Computers & Chemical Engineering, 2022, ISSN 0098-1354
Wydawca: Pergamon Press Ltd.
DOI: 10.1016/j.compchemeng.2022.107952

Cyanobacterial biofilms: from natural systems to applications

Autorzy: Mahir Bozan, Hannah Berreth, Pia Lindberg, Katja Bühler
Opublikowane w: Trends in Biotechnology, 2024, ISSN 0167-7799
Wydawca: Elsevier BV
DOI: 10.1016/j.tibtech.2024.08.005

Challenges, progress, and future perspectives for cyanobacterial polyhydroxyalkanoate production

Autorzy: Estel Rueda, Eva Gonzalez-Flo, Soumila Mondal, Karl Forchhammer, Dulce María Arias, Katharina Ludwig, Bernhard Drosg, Ines Fritz, C. Raul Gonzalez-Esquer, Sara Pacheco, Joan García
Opublikowane w: Reviews in Environmental Science and Bio/Technology, Numer 23, 2024, Strona(/y) 321-350, ISSN 1569-1705
Wydawca: Kluwer Academic Publishers
DOI: 10.1007/s11157-024-09689-0

A Coculture of Photoautotrophs and Hydrolytic Heterotrophs Enables Efficient Upcycling of Starch from Wastewater toward Biomass-Derived Products: Synergistic Interactions Impacting Metabolism of the Consortium

Autorzy: Minmin Pan, Yiru Wang, Jens O. Krömer, Xinyu Zhu, Marie Karen Tracy Hong Lin, Irini Angelidaki
Opublikowane w: Environmental Science & Technology, Numer 57, 2023, Strona(/y) 15523-15532, ISSN 0013-936X
Wydawca: American Chemical Society
DOI: 10.1021/acs.est.3c05321

SBML2HYB: a Python interface for SBML compatible hybrid modeling

Autorzy: José Pinto, Rafael S Costa, Leonardo Alexandre, João Ramos, Rui Oliveira
Opublikowane w: Bioinformatics, 2023, ISSN 1367-4803
Wydawca: Oxford University Press
DOI: 10.1093/bioinformatics/btad044

Enhancing biodesulfurization by engineering a synthetic dibenzothiophene mineralization pathway

Autorzy: Igor Martínez, Magdy El-Said Mohamed, José Luis García, Eduardo Díaz
Opublikowane w: Frontiers in Microbiology, Numer 13, 2022, ISSN 1664-302X
Wydawca: Frontiers Media
DOI: 10.3389/fmicb.2022.987084

Ecological forces dictate microbial community assembly processes in bioreactor systems

Autorzy: Shuang LiSusann Müller
Opublikowane w: Current Opinion in Biotechnology, 2023, ISSN 0958-1669
Wydawca: Elsevier BV
DOI: 10.1016/j.copbio.2023.102917

Current advances in engineering cyanobacteria and their applications for photosynthetic butanol production

Autorzy: Xufeng Liu, Hao Xie, Stamatina Roussou, Peter Lindblad
Opublikowane w: Current Opinion in Biotechnology, 2021, ISSN 0958-1669
Wydawca: Elsevier BV
DOI: 10.1016/j.copbio.2021.07.014

Microalgae harvesting for wastewater treatment and resources recovery: A review

Autorzy: Etiele Greque de Morais, Igor Carvalho Fontes Sampaio, Eva Gonzalez-Flo, Ivet Ferrer, Enrica Uggetti, Joan García
Opublikowane w: New Biotechnology, Numer 78, 2023, Strona(/y) 84-94, ISSN 1871-6784
Wydawca: Elsevier BV
DOI: 10.1016/j.nbt.2023.10.002

Enhancing tellurite and selenite bioconversions by overexpressing a methyltransferase from <i>Aromatoleum</i> sp. CIB

Autorzy: Elena Alonso‐Fernandes, Helga Fernández‐Llamosas, Irene Cano, Cristina Serrano‐Pelejero, Laura Castro, Eduardo Díaz, Manuel Carmona
Opublikowane w: Microbial Biotechnology, Numer 16, 2023, Strona(/y) 915-930, ISSN 1751-7915
Wydawca: Willey
DOI: 10.1111/1751-7915.14162

New Insights on Metabolic Features of Bacillus subtilis Based on Multistrain Genome-Scale Metabolic Modeling

Autorzy: Blas Blázquez, David San León, Antonia Rojas, Marta Tortajada, Juan Nogales
Opublikowane w: International Journal of Molecular Sciences, Numer 24, 2023, Strona(/y) 7091, ISSN 1422-0067
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms24087091

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