Complex eco-evolutionary dynamics of aquatic ecosystems faced with human-induced and environmental stress

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Publikacje

A modified niche model for generating food webs with stage-structured consumers: The stabilizing effects of life-history stages on complex food webs

Autorzy: Etsuko Nonaka; Anna Kuparinen
Opublikowane w: Ecology and Evolution, 2021, ISSN 2045-7758
Wydawca: John Wiley and Sons Ltd
DOI: 10.22541/au.161211501.10254178/v1

Disentangling conditional effects of multiple regime shifts on Atlantic cod productivity

Autorzy: Tommi Perälä, Esben M. Olsen, Jeffrey A. Hutchings
Opublikowane w: PLOS ONE, Numer 15/11, 2020, Strona(/y) e0237414, ISSN 1932-6203
Wydawca: Public Library of Science
DOI: 10.1371/journal.pone.0237414

Increasing temperatures accentuate negative fitness consequences of a marine parasite

Autorzy: Sean C. Godwin, Mark D. Fast, Anna Kuparinen, Kate E. Medcalf, Jeffrey A. Hutchings
Opublikowane w: Scientific Reports, Numer 10/1, 2020, ISSN 2045-2322
Wydawca: Nature Publishing Group
DOI: 10.1038/s41598-020-74948-3

Eco‐evolutionary dynamics driven by fishing: From single species models to dynamic evolution within complex food webs

Autorzy: Tommi Perälä, Anna Kuparinen
Opublikowane w: Evolutionary Applications, Numer 13/10, 2020, Strona(/y) 2507-2520, ISSN 1752-4571
Wydawca: Wiley
DOI: 10.1111/eva.13058

Throwing down a genomic gauntlet on fisheries-induced evolution

Autorzy: Jeffrey A. Hutchings, Anna Kuparinen
Opublikowane w: Proceedings of the National Academy of Sciences, Numer 118/20, 2021, Strona(/y) e2105319118, ISSN 0027-8424
Wydawca: National Academy of Sciences
DOI: 10.1073/pnas.2105319118

Age is not just a number : Mathematical model suggests senescence affects how fish populations respond to different fishing regimes

Autorzy: Ahti, Pauliina A.; Uusi‐Heikkilä, Silva; Marjomäki, Timo J.; Kuparinen, Anna
Opublikowane w: Ecology and Evolution, 2021, ISSN 2045-7758
Wydawca: John Wiley and Sons Ltd
DOI: 10.1002/ece3.8058

Effects of temporal abiotic drivers on the dynamics of an allometric trophic network model

Autorzy: Antti P. Eloranta; Tommi Perälä; Anna Kuparinen
Opublikowane w: Ecology and Evolution, Numer 13, 2023, Strona(/y) e9928, ISSN 2045-7758
Wydawca: John Wiley and Sons Ltd
DOI: 10.1002/ece3.9928

Gill area explains deviations from body size–metabolic rate relationship in teleost fishes

Autorzy: Anna Kuparinen; Darby Gielewski; Jeffrey A. Hutchings
Opublikowane w: Journal of Fish Biology, Numer 6, 2022, ISSN 1095-8649
Wydawca: Wiley
DOI: 10.1111/jfb.15084

Salmon lice in the Pacific Ocean show evidence of evolved resistance to parasiticide treatment

Autorzy: Sean C. Godwin; Andrew W. Bateman; Anna Kuparinen; Rick Johnson; John Powell; Kelly Speck; Jeffrey A. Hutchings
Opublikowane w: Scientific Reports, Numer 8, 2022, ISSN 2045-2322
Wydawca: Nature Publishing Group
DOI: 10.1038/s41598-022-07464-1

Exploring individual and population eco-evolutionary feedbacks under the coupled effects of fishing and predation

Autorzy: Dunja Jusufovski; Anna Kuparinen
Opublikowane w: Fisheries Research, Numer 6, 2019, ISSN 0165-7836
Wydawca: Elsevier BV
DOI: 10.1016/j.fishres.2020.105713

Marine food web perspective to fishing‐induced evolution

Autorzy: Sara Hočevar, Anna Kuparinen
Opublikowane w: Evolutionary Applications, 2021, ISSN 1752-4571
Wydawca: Wiley
DOI: 10.1111/eva.13259

Multiple‐batch spawning as a bet‐hedging strategy in highly stochastic environments: an exploratory analysis of Atlantic cod

Autorzy: Sara Hočevar, Jeffrey A. Hutchings, Anna Kuparinen
Opublikowane w: Evolutionary Applications, 2021, ISSN 1752-4571
Wydawca: Wiley
DOI: 10.1111/eva.13251

Fish with slow life-history cope better with chronic manganese exposure than fish with fast life-history

Autorzy: Silva Uusi-Heikkilä, Jouni K. Salonen, Juha S. Karjalainen, Ari Väisänen, Johanna Hippeläinen, Teemu Hämärvuo, Anna Kuparinen
Opublikowane w: Ecology and Evolution, 2024, Strona(/y) 2024;14:e70134., ISSN 2045-7758
Wydawca: John Wiley and Sons Ltd
DOI: 10.1002/ece3.70134

Correlation between body size and longevity : New analysis and data covering six taxonomic classes of vertebrates

Autorzy: Anna Kuparinen; Emily Yeung; Jeffrey A. Hutchings
Opublikowane w: Acta Oecologica, Numer 119, 2023, Strona(/y) 103917, ISSN 1146-609X
Wydawca: Elsevier BV
DOI: 10.1016/j.actao.2023.103917

Multiple-batch spawning: a risk-spreading strategy disarmed by highly intensive size-selective fishing rate

Autorzy: Sara Hočevar; Jeffrey A. Hutchings; Anna Kuparinen
Opublikowane w: Proceedings of the Royal Society of London. Biological Sciences, 2022, ISSN 1471-2954
Wydawca: Royal Society Publishing
DOI: 10.1098/rspb.2022.1172

The effect of fish life-history structures on the topologies of aquatic food webs

Autorzy: Milko Vesterinen; Tommi Perälä; Anna Kuparinen
Opublikowane w: Food Webs, 2021, ISSN 2352-2496
Wydawca: Elsevier BV
DOI: 10.1016/j.fooweb.2021.e00213

Allee effects and the Allee-effect zone in northwest Atlantic cod

Autorzy: Perälä, Tommi; Hutchings, Jeffrey A.; Kuparinen, Anna
Opublikowane w: Biology Letters, 2022, ISSN 1744-957X
Wydawca: Royal Society Publishing
DOI: 10.1098/rsbl.2021.0439

Limited effects of size-selective harvesting and harvesting-induced life-history changes on the temporal variability of biomass dynamics in complex food webs

Autorzy: Etsuko Nonaka, Anna Kuparinen
Opublikowane w: Ecological Modelling, 2022, ISSN 0304-3800
Wydawca: Elsevier BV
DOI: 10.1016/j.ecolmodel.2022.110150

Mutually exclusive feeding yields Holling type <scp>III</scp> functional response

Autorzy: Sami O. Lehtinen; Tommi A. Perälä; Silva K. Uusi‐Heikkilä; Anna K. Kuparinen
Opublikowane w: Functional Ecology, Numer 38, 2024, Strona(/y) 403–416, ISSN 0269-8463
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/1365-2435.14475

Atlantic cod individual spatial behaviour and stable isotope associations in a no‐take marine reserve

Autorzy: Christopher T. Monk; Michael Power; Carla Freitas; Philip M. Harrison; Michelle Heupel; Anna Kuparinen; Even Moland; Colin Simpfendorfer; David Villegas‐Ríos; Esben M. Olsen
Opublikowane w: Journal of Animal Ecology, Numer 92, 2023, Strona(/y) 2333–2347., ISSN 0021-8790
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/1365-2656.14014

Non-trophic interactions amplify kelp harvest-induced biomass oscillations and biomass changes in a kelp forest ecological network model

Autorzy: Perälä, Tommi; Pesari, Susanna N. K.; Ahti, Pauliina A.; Lehtinen, Sami O.; Schoenrock, Kathryn M.; Kuparinen, Anna
Opublikowane w: Marine Ecology Progress Series, Numer 722, 2023, Strona(/y) 19-36, ISSN 0171-8630
Wydawca: Inter-Research Science Publishing
DOI: 10.3354/meps14438

Generalist invasion in a complex lake food web

Autorzy: Kuparinen, Anna; Uusi‐Heikkilä, Silva; Perälä, Tommi; Ercoli, Fabio; Eloranta, Antti P.; Cremona, Fabien; Nõges, Peeter; Laas, Alo; Nõges, Tiina
Opublikowane w: Conservation Science and Practice, Numer 2023, 2023, Strona(/y) e12931, ISSN 2578-4854
Wydawca: Wiley
DOI: 10.1111/csp2.12931

Fish with slow life-history cope better with chronic manganese exposure than fish with fast life-history

Autorzy: Silva Uusi-Heikkilä, Jouni Salonen, Juha Karjalainen, Ari Väisänen, Johanna Hippeläinen, Teemu Hämärvuo, Anna Kuparinen
Opublikowane w: Ecology and Evolution, 2024, ISSN 2045-7758
Wydawca: John Wiley and Sons Ltd
DOI: 10.22541/au.172463814.48140820/v1

Atlantic salmon survival at sea: temporal changes that lack regional synchrony

Autorzy: Maria Tirronen; Jeffrey A. Hutchings; Sebastián A. Pardo; Anna Kuparinen
Opublikowane w: Canadian Journal of Fisheries and Aquatic Sciences, 2022, ISSN 0706-652X
Wydawca: NRC Research Press
DOI: 10.1139/cjfas-2021-0302

Food-web complexity, consumer behavior, and diet specialism: impacts on ecosystem stability

Autorzy: Tommi Perälä, Mikael Kuisma, Silva Uusi-Heikkilä, Anna Kuparinen
Opublikowane w: Theoretical Ecology, Numer 17, 2024, Strona(/y) 131-141, ISSN 1874-1738
Wydawca: Springer Verlag
DOI: 10.1007/s12080-024-00580-w

Atlantic cod recovery from the Allee effect zone: contrasting ecological and evolutionary rescue

Autorzy: Anna Kuparinen, Silva Uusi‐Heikkilä
Opublikowane w: Fish and Fisheries, Numer 21/5, 2020, Strona(/y) 916-926, ISSN 1467-2960
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/faf.12470

Warming temperatures and ectoparasitic sea lice impair internal organs in juvenile Atlantic salmon

Autorzy: KE Medcalf, JA Hutchings, MD Fast, A Kuparinen, SC Godwin
Opublikowane w: Marine Ecology Progress Series, Numer 660, 2021, Strona(/y) 161-169, ISSN 0171-8630
Wydawca: Inter-Research Science Publishing
DOI: 10.3354/meps13610

Parasite‐mediated changes in host traits alter food web dynamics

Autorzy: Ines Klemme, Tommi Perälä, Sami O. Lehtinen, Anna Kuparinen
Opublikowane w: Oikos, Numer 2024, 2024, ISSN 0030-1299
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/oik.10374

Fishing triggers trophic cascade in terms of variation, not abundance, in an allometric trophic network model

Autorzy: Silva Uusi-Heikkilä; Tommi Perälä; Anna Kuparinen
Opublikowane w: Canadian Journal of Fisheries and Aquatic Sciences, Numer 3, 2021, ISSN 0706-652X
Wydawca: NRC Research Press
DOI: 10.1139/cjfas-2021-0146

Parameter estimation for allometric trophic network models: A variational Bayesian inverse problem approach

Autorzy: Maria Tirronen, Anna Kuparinen
Opublikowane w: Methods in Ecology and Evolution, 2024, ISSN 2041-210X
Wydawca: John Wiley and Sons Inc.
DOI: 10.1111/2041-210x.14447

Are there plenty of fish in the sea? How life history traits affect the eco-evolutionary consequences of population oscillations

Autorzy: Pauliina A. Ahti; Silva Uusi-Heikkilä; Anna Kuparinen
Opublikowane w: Fisheries Research, 2022, ISSN 0165-7836
Wydawca: Elsevier BV
DOI: 10.1016/j.fishres.2022.106409

A modified niche model for generating food webs with stage‐structured consumers: The stabilizing effects of life‐history stages on complex food webs

Autorzy: Etsuko Nonaka, Anna Kuparinen
Opublikowane w: Ecology and Evolution, Numer 11/9, 2021, Strona(/y) 4101-4125, ISSN 2045-7758
Wydawca: John Wiley and Sons Ltd
DOI: 10.1002/ece3.7309

Implications of fisheries‐induced evolution for population recovery: Refocusing the science and refining its communication

Autorzy: Jeffrey A. Hutchings, Anna Kuparinen
Opublikowane w: Fish and Fisheries, 2019, ISSN 1467-2960
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/faf.12424

The role of fish life histories in allometrically scaled food‐web dynamics

Autorzy: Stephanie Bland, Fernanda S. Valdovinos, Jeffrey A. Hutchings, Anna Kuparinen
Opublikowane w: Ecology and Evolution, Numer 9/6, 2019, Strona(/y) 3651-3660, ISSN 2045-7758
Wydawca: John Wiley and Sons Ltd
DOI: 10.1002/ece3.4996

When phenotypes fail to illuminate underlying genetic processes in fish and fisheries science

Autorzy: Anna Kuparinen, Jeffrey A Hutchings
Opublikowane w: ICES Journal of Marine Science, Numer 76/4, 2019, Strona(/y) 999-1006, ISSN 1054-3139
Wydawca: Oxford University Press
DOI: 10.1093/icesjms/fsz002

Potential for managing life history diversity in a commercially exploited intermediate predator, the goldsinny wrasse (Ctenolabrus rupestris)

Autorzy: Esben Moland Olsen, Kim Tallaksen Halvorsen, Torkel Larsen, Anna Kuparinen
Opublikowane w: ICES Journal of Marine Science, Numer 76/2, 2018, Strona(/y) 410-417, ISSN 1054-3139
Wydawca: Oxford University Press
DOI: 10.1093/icesjms/fsy183

Size does matter — the eco-evolutionary effects of changing body size in fish

Autorzy: Pauliina A. Ahti, Anna Kuparinen, Silva Uusi-Heikkilä
Opublikowane w: Environmental Reviews, Numer 28/3, 2020, Strona(/y) 311-324, ISSN 1181-8700
Wydawca: NRC Research Press
DOI: 10.1139/er-2019-0076

Calibrating Expert Assessments Using Hierarchical Gaussian Process Models

Autorzy: Tommi Perälä, Jarno Vanhatalo, Anna Chrysafi
Opublikowane w: Bayesian Analysis, Numer 15/4, 2020, Strona(/y) 1251-1280, ISSN 1936-0975
Wydawca: Carnegie Mellon University
DOI: 10.1214/19-ba1180

Consequences of Single-Locus and Tightly Linked Genomic Architectures for Evolutionary Responses to Environmental Change

Autorzy: Rebekah A Oomen, Anna Kuparinen, Jeffrey A Hutchings
Opublikowane w: Journal of Heredity, 2020, ISSN 0022-1503
Wydawca: Oxford University Press
DOI: 10.1093/jhered/esaa020

Return of the apex predator — how brown trout (Salmo trutta) re-establishment shapes an ecosystem

Autorzy: Tommi Perälä, Silva Uusi-Heikkilä, Anna Kuparinen
Opublikowane w: Annales Zoology Fennici, 2021, ISSN 1797-2450
Wydawca: Finnish Zoological and Botanical Publishing Board
DOI: 10.5735/086.058.0409

Effects of top predator re-establishment and fishing on a simulated food web: Allometric Trophic Network model for Lake Oulujärvi

Autorzy: Eevi Kokkonen, Mikael Kuisma, Pekka Hyvärinen, Anssi Vainikka, Kristiina Vuorio, Tommi Perälä, Laura S. Härkönen, Satu Estlander, Anna Kuparinen
Opublikowane w: Ecological Modelling, Numer 492, 2024, Strona(/y) 110715, ISSN 0304-3800
Wydawca: Elsevier BV
DOI: 10.1016/j.ecolmodel.2024.110715

Temporary Allee effects among non-stationary recruitment dynamics in depleted gadid and flatfish populations

Autorzy: Maria Tirronen; Tommi Perälä; Anna Kuparinen
Opublikowane w: Fish and Fisheries, Numer 8, 2022, ISSN 1467-2979
Wydawca: Wiley
DOI: 10.1111/faf.12623

Cyclical and stochastic thermal variability affects survival and growth in brook trout.

Autorzy: Olivia M. Pisano; Anna Kuparinen; Jeffrey A. Hutchings
Opublikowane w: Journal of Thermal Biology, Numer 6, 2019, ISSN 0306-4565
Wydawca: Pergamon Press Ltd.
DOI: 10.1016/j.jtherbio.2019.07.012

Building up an ecologically sustainable and socially desirable post-COVID-19 future

Autorzy: Rémi Duflot, Stefan Baumeister, Daniel Burgas, Kyle Eyvindson, María Triviño, Clemens Blattert, Anna Kuparinen, Mária Potterf
Opublikowane w: Sustainability Science, 2021, ISSN 1862-4065
Wydawca: Springer Verlag
DOI: 10.1007/s11625-021-00940-z

Comparison of Bayesian and numerical optimization-based diet estimation on herbivorous zooplankton

Autorzy: Jaakko J. Litmanen, Tommi A. Perälä, Sami J. Taipale
Opublikowane w: Philosophical Transactions of the Royal Society B: Biological Sciences, Numer 375/1804, 2020, Strona(/y) 20190651, ISSN 0962-8436
Wydawca: Royal Society of London
DOI: 10.1098/rstb.2019.0651

Environmental forcing alters fisheries selection

Autorzy: Davide Thambithurai; Anna Kuparinen
Opublikowane w: Trends in Ecology and Evolution, Numer 39, 2024, Strona(/y) 131-140, ISSN 0169-5347
Wydawca: Elsevier BV
DOI: 10.1016/j.tree.2023.08.015

Growth and longevity of the endangered freshwater pearl mussel (<scp><i>Margaritifera margaritifera</i></scp>): Implications for conservation and management

Autorzy: Sabrina Nykänen, Jouni Taskinen, Mahsa Hajisafarali, Anna Kuparinen
Opublikowane w: Aquatic Conservation: Marine and Freshwater Ecosystems, Numer 34, 2024, ISSN 1052-7613
Wydawca: John Wiley & Sons Inc.
DOI: 10.1002/aqc.4205

Can regime shifts in reproduction be explained by changing climate and food availability?

Autorzy: Tirronen, Maria; Depestele, Jochen; Kuparinen, Anna
Opublikowane w: Frontiers in Marine Science, Numer 10, 2023, Strona(/y) 1167354, ISSN 2296-7745
Wydawca: Frontiers
DOI: 10.3389/fmars.2023.1167354

Planetary well-being

Autorzy: Kortetmäki, Teea; Puurtinen, Mikael; Salo, Miikka; Aro, Riikka; Baumeister, Stefan; Duflot, Rémi; Elo, Merja; Halme, Panu; Husu, Hanna-Mari; Huttunen, Suvi; Hyvönen, Katriina; Karkulehto, Sanna; Kataja-aho, Saana; Keskinen, Kirsi E.; Kulmunki, Inari; Mäkinen, Tuuli; Näyhä, Annukka; Okkolin, Mari-Anne; Perälä, Tommi; Purhonen, Jenna; Raatikainen, Kaisa J.; Raippalinna, Liia-Maria; Salonen,
Opublikowane w: Interdisciplinary Perspectives on Planetary Well-Being, 2024, ISBN 978-1-032-36828-3
Wydawca: Routledge
DOI: 10.4324/9781003334002-3

Workshop on ICES reference points (WKREF2)

Autorzy: Lordan, Colm; Orio, Alessandro; Kempf, Alexander; Pierucci, Andrea; Kuparinen, Anna; Rindorf, Anna; Peyronnet, Arnaud; Wilson, Ashley; Albertsen, Christoffer Moesgaard; Konrad, Christoph; Sparrevohn, Claus Reedtz; Minto, Cóilín; Howell, Daniel; Gilljam, David; Miller, David; Garcia, Dorleta; Armelloni, Enrico; Abad, Esther; Masnadi, Francesco; Scarcella, Giuseppe; Dingsør, Gjert Endre; Winker,
Opublikowane w: ICES Scientific Reports, 2022
Wydawca: ICES
DOI: 10.17895/ices.pub.20557008

Benchmark Workshop on Atlantic Salmon (Salmo salar) in the North Atlantic (WKBSALMON)

Autorzy: Perälä, Tommi; White, Jonathan; Adams, Grant; April, Julien; Bárðarson, Hlynur; Ahlbeck Bergendahl, Ida; Bolstad, Geir; Breau, Cindy; Bull, Colin; Chaput, Gerald; Cooper, Anne; Dauphin, Guillaume; Erkinaro, Jaakko; Gillson, Jonathan; Gregory, Stephen; Jepsen, Niels; Kermoade, MacKenzie; Lebot, Clément; Legault, Chris; Maxwell, Hugo; McGinnity, Philip; Meerburg, David; Millane, Michael; Nadoln
Opublikowane w: ICES Scientific Reports, Numer 1, 2023, ISSN 2618-1371
Wydawca: NA
DOI: 10.17895/ices.pub.24752079

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