Teaching Emerging Methods in Palaeoproteomics for the European Research Area

Rezultaty

Interaction outside the network, in particular with the broad audience and the press will be also promoted by extensive use of social media. TEMPERA will open its own G+, YouTube, Twitter and Instagram accounts.

e-Book

The ESRs will be asked to contribute to and edit an open access electronic and print-on-demand Book.

TEMPERA conference session

In addition to attending national and international conferences the network plans to arrange its own conference thematic session, as part of the International Symposium of Biomolecular Archaeology, towards the end of the lifetime of the network. This conference will be coordinated with the TEMPERA exhibition with the specific aim to disseminate the network’s research findings as widely as possible among specialists and the general public alike.

Ancient Proteins@20 Conference

"During the first two years of their PhD programme, the ESRs will organise the ""Ancient Proteins@20” Conference, entirely dedicated to state of the art ancient proteins research. The conference will take place in Copenhagen in August 2018. The event will be promoted through a dedicated website (https://sites.google.com/palaeome.org/2018-ancient-proteins/home?authuser=0) and worldwide on-line live streaming. It will also be extensively covered on social media, e.g Twitter."

TEMPERA website launch

For many people, the website will provide the first point of contact. Therefore, we plan to run the website throughout (and beyond) the life of the network, containing profiles of all project members, up-to-date descriptions of results, publications and podcasts.

Publikacje

Identification of binders in Nubian wall paintings using proteomics

Autorzy: Francesca Galluzzi, Stéphanie Devassine, Fabrice Bray, Christian Rolando and Caroline Tokarski
Opublikowane w: Medieval Nubian Wall Paintings: Techniques and Conservation, 2019, ISBN 9781909492684
Wydawca: Archetype Books

Skin, Furs, and Textiles: Mass Spectrometry-based Analysis of Ancient Protein Residues

Autorzy: Fabiana Di Gianvincenzo, Clara Granzotto, Enrico Cappellini
Opublikowane w: The Textile Revolution in Bronze Age Europe: Production, Specialisation, Consumption, 2019, Strona(/y) 304-316, ISBN 9781108493598
Wydawca: Cambridge University Press
DOI: 10.1017/9781108656405.013

A versatile and user-friendly approach for the analysis of proteins in ancient and historical objects

Autorzy: Georgia Ntasi, Daniel P. Kirby, Ilaria Stanzione, Andrea Carpentieri, Patrizia Somma, Paola Cicatiello, Gennaro Marino, Paola Giardina, Leila Birolo
Opublikowane w: Journal of Proteomics, Numer 231, 2021, Strona(/y) 104039, ISSN 1874-3919
Wydawca: Elsevier BV
DOI: 10.1016/j.jprot.2020.104039

The dental proteome of Homo antecessor

Autorzy: Frido Welker, Jazmín Ramos-Madrigal, Petra Gutenbrunner, Meaghan Mackie, Shivani Tiwary, Rosa Rakownikow Jersie-Christensen, Cristina Chiva, Marc R. Dickinson, Martin Kuhlwilm, Marc de Manuel, Pere Gelabert, María Martinón-Torres, Ann Margvelashvili, Juan Luis Arsuaga, Eudald Carbonell, Tomas Marques-Bonet, Kirsty Penkman, Eduard Sabidó, Jürgen Cox, Jesper V. Olsen, David Lordkipanidze, Ferna
Opublikowane w: Nature, Numer 580/7802, 2020, Strona(/y) 235-238, ISSN 0028-0836
Wydawca: Nature Publishing Group
DOI: 10.1038/s41586-020-2153-8

Mixing, dipping, and fixing: the experimental drawing techniques of Thomas Gainsborough

Autorzy: Federica Pozzi, Julie Arslanoglu, Francesca Galluzzi, Caroline Tokarski, Reba Snyder
Opublikowane w: Heritage Science, Numer 8/1, 2020, ISSN 2050-7445
Wydawca: Springer
DOI: 10.1186/s40494-020-00431-x

Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny

Autorzy: Enrico Cappellini, Frido Welker, Luca Pandolfi, Jazmín Ramos-Madrigal, Diana Samodova, Patrick L. Rüther, Anna K. Fotakis, David Lyon, J. Víctor Moreno-Mayar, Maia Bukhsianidze, Rosa Rakownikow Jersie-Christensen, Meaghan Mackie, Aurélien Ginolhac, Reid Ferring, Martha Tappen, Eleftheria Palkopoulou, Marc R. Dickinson, Thomas W. Stafford, Yvonne L. Chan, Anders Götherström, Senthilvel K. S.
Opublikowane w: Nature, Numer 574/7776, 2019, Strona(/y) 103-107, ISSN 0028-0836
Wydawca: Nature Publishing Group
DOI: 10.1038/s41586-019-1555-y

A MULTIDISCIPLINARY ASSESSMENT TO INVESTIGATE A XXII DYNASTY WOODEN COFFIN

Autorzy: Chiara MELCHIORRE, Laura DELLO IOIO, Georgia NTASI, Leila BIROLO, Giorgio TROJSI , Paola CENNAMO, Maria Rosaria BARONE LUMAGA, Giancarlo FATIGATI, Angela AMORESANO, Andrea CARPENTIERI
Opublikowane w: INTERNATIONAL JOURNAL OF CONSERVATION SCIENCE, Numer 11, Numer 1, January-March 2020, 2020, Strona(/y) 25-38, ISSN 2067-533X
Wydawca: Editura Universitatea Alexendru Ion Cuza

ProAlanase is an Effective Alternative to Trypsin for Proteomics Applications and Disulfide Bond Mapping

Autorzy: Diana Samodova, Christopher M. Hosfield, Christian N. Cramer, Maria V. Giuli, Enrico Cappellini, Giulia Franciosa, Michael M. Rosenblatt, Christian D. Kelstrup, Jesper V. Olsen
Opublikowane w: Molecular & Cellular Proteomics, Numer 19/12, 2020, Strona(/y) 2139-2157, ISSN 1535-9476
Wydawca: American Society for Biochemistry and Molecular Biology Inc.
DOI: 10.1074/mcp.tir120.002129

Ancient Biomolecules and Evolutionary Inference

Autorzy: Enrico Cappellini, Ana Prohaska, Fernando Racimo, Frido Welker, Mikkel Winther Pedersen, Morten E. Allentoft, Peter de Barros Damgaard, Petra Gutenbrunner, Julie Dunne, Simon Hammann, Mélanie Roffet-Salque, Melissa Ilardo, J. Víctor Moreno-Mayar, Yucheng Wang, Martin Sikora, Lasse Vinner, Jürgen Cox, Richard P. Evershed, Eske Willerslev
Opublikowane w: Annual Review of Biochemistry, Numer 87/1, 2018, Strona(/y) 1029-1060, ISSN 0066-4154
Wydawca: Annual Reviews, Inc.
DOI: 10.1146/annurev-biochem-062917-012002

Palaeoproteomic Profiling of Conservation Layers on a 14th Century Italian Wall Painting

Autorzy: Meaghan Mackie, Patrick Rüther, Diana Samodova, Fabiana Di Gianvincenzo, Clara Granzotto, David Lyon, David A. Peggie, Helen Howard, Lynne Harrison, Lars Juhl Jensen, Jesper V. Olsen, Enrico Cappellini
Opublikowane w: Angewandte Chemie International Edition, Numer 57/25, 2018, Strona(/y) 7369-7374, ISSN 1433-7851
Wydawca: John Wiley & Sons Ltd.
DOI: 10.1002/anie.201713020

Minimally Invasive and Portable Method for the Identification of Proteins in Ancient Paintings

Autorzy: Paola Cicatiello, Georgia Ntasi, Manuela Rossi, Gennaro Marino, Paola Giardina, Leila Birolo
Opublikowane w: Analytical Chemistry, Numer 90/17, 2018, Strona(/y) 10128-10133, ISSN 0003-2700
Wydawca: American Chemical Society
DOI: 10.1021/acs.analchem.8b01718

Evolved Gas Analysis-Mass Spectrometry to Identify the Earliest Organic Binder in Aegean Style Wall Paintings

Autorzy: Ravit Linn, Ilaria Bonaduce, Georgia Ntasi, Leila Birolo, Assaf Yasur-Landau, Eric H. Cline, Austin Nevin, Anna Lluveras-Tenorio
Opublikowane w: Angewandte Chemie International Edition, Numer 57/40, 2018, Strona(/y) 13257-13260, ISSN 1433-7851
Wydawca: John Wiley & Sons Ltd.
DOI: 10.1002/anie.201806520

Protein aggregation capture on microparticles enables multi-purpose proteomics sample preparation.

Autorzy: Tanveer Singh Batth, Maxim A.X. Tollenaere, Patrick Leopold Rüther, Alba Gonzalez-Franquesa, Bhargav Saligram Prabhakar, Simon Holst Bekker-Jensen, Atul Shahaji Deshmukh, Jesper V. Olsen
Opublikowane w: Molecular & Cellular Proteomics, 2018, Strona(/y) mcp.TIR118.001270, ISSN 1535-9476
Wydawca: American Society for Biochemistry and Molecular Biology Inc.
DOI: 10.1074/mcp.tir118.001270

Molecular basis of Tousled-Like Kinase 2 activation

Autorzy: Gulnahar B. Mortuza, Dario Hermida, Anna-Kathrine Pedersen, Sandra Segura-Bayona, Blanca López-Méndez, Pilar Redondo, Patrick Rüther, Irina Pozdnyakova, Ana M. Garrote, Inés G. Muñoz, Marina Villamor-Payà, Cristina Jauset, Jesper V. Olsen, Travis H. Stracker, Guillermo Montoya
Opublikowane w: Nature Communications, Numer 9/1, 2018, ISSN 2041-1723
Wydawca: Nature Publishing Group
DOI: 10.1038/s41467-018-04941-y

High-quality MS/MS spectrum prediction for data-dependent and data-independent acquisition data analysis

Autorzy: Shivani Tiwary, Roie Levy, Petra Gutenbrunner, Favio Salinas Soto, Krishnan K. Palaniappan, Laura Deming, Marc Berndl, Arthur Brant, Peter Cimermancic, Jürgen Cox
Opublikowane w: Nature Methods, Numer 16/6, 2019, Strona(/y) 519-525, ISSN 1548-7091
Wydawca: Nature Publishing Group
DOI: 10.1038/s41592-019-0427-6

Enamel proteome shows that Gigantopithecus was an early diverging pongine

Autorzy: Jürgen Cox; Morten E. Allentoft; Tomas Marques-Bonet; Wei Wang; Jesper V. Olsen; Diana Samodova; Petra Gutenbrunner; Enrico Cappellini; Marc de Manuel; Carles Lalueza-Fox; Fabrice Demeter; Frido Welker; Wei Liao; Meaghan Mackie; Anne-Marie Bacon; Matthew Collins; Matthew Collins; Martin Kuhlwilm; Jazmín Ramos-Madrigal
Opublikowane w: https://hal.archives-ouvertes.fr/hal-03021856, Numer 576, 2019, Strona(/y) 262–265, ISSN 0028-0836
Wydawca: Nature Publishing Group
DOI: 10.1038/s41586-019-1728-8

Early Pleistocene enamel proteome sequences from Dmanisi resolve Stephanorhinus phylogeny

Autorzy: Enrico Cappellini, Frido Welker, Luca Pandolfi, Jazmin Ramos Madrigal, Anna Fotakis, David Lyon, Victor L Moreno Mayar, Maia Bukhsianidze, Rosa Rakownikow Jersie-Christensen, Meaghan Mackie, Aurelien Ginolhac, Reid Ferring, Martha Tappen, Eleftheria Palkopoulou, Diana Samodova, Patrick L Ruther, Marc R Dickinson, Tom Stafford, Yvonne L Chan, Anders Gotherstrom, Senthivel KSS Nathan, Peter D Heintz
Opublikowane w: bioRxiv, 2018
Wydawca: Cold Spring Harbor Laboratory
DOI: 10.1101/407692

A Compact Quadrupole-Orbitrap Mass Spectrometer with FAIMS Interface Improves Proteome Coverage in Short LC Gradients

Autorzy: Dorte B. Bekker-Jensen, Ana Martínez del Val, Sophia Steigerwald, Patrick Rüther, Kyle Fort, Tabiwang N. Arrey, Alexander Harder, Alexander Makarov, Jesper V. Olsen
Opublikowane w: bioRxiv, 2019
Wydawca: Cold Spring Harbor Laboratory
DOI: 10.1101/860643

SPIN - Species by Proteome INvestigation

Autorzy: Patrick Leopold Ruether, Immanuel Mirnes Husic, Pernille Bangsgaard, Kristian Murphy Gregersen, Pernille Pantmann, Milena Carvalho, Ricardo Miguel Godinho, Lukas Friedl, Joao Cascalheira, Marie Louise Schjellerup Joerkov, Michael Benedetti, Jonathan Haws, Nuno Bicho, Frido Welker, Enrico Cappellini, Jesper Velgaard Olsen
Opublikowane w: bioRxiv, 2021
Wydawca: Cold Spring Harbor Laboratory

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