The evolutionary ecology of bacterial immune mechanisms

Publikacje

Phage gene expression and host responses lead to infection-dependent costs of CRISPR immunity

Autorzy: Sean Meaden, Loris Capria, Ellinor Alseth, Sylvain Gandon, Ambarish Biswas, Luca Lenzi, Stineke van Houte, Edze R. Westra
Opublikowane w: The ISME Journal, Numer 15/2, 2021, Strona(/y) 534-544, ISSN 1751-7362
Wydawca: Nature Publishing Group
DOI: 10.1038/s41396-020-00794-w

Coevolution between bacterial CRISPR-Cas systems and their bacteriophages

Autorzy: Bridget N.J. Watson, Jurre A. Steens, Raymond H.J. Staals, Edze R. Westra, Stineke van Houte
Opublikowane w: Cell Host & Microbe, Numer 29/5, 2021, Strona(/y) 715-725, ISSN 1931-3128
Wydawca: Cell Press
DOI: 10.1016/j.chom.2021.03.018

Anti-CRISPR Phages Cooperate to Overcome CRISPR-Cas Immunity

Autorzy: Mariann Landsberger, Sylvain Gandon, Sean Meaden, Clare Rollie, Anne Chevallereau, Hélène Chabas, Angus Buckling, Edze R. Westra, Stineke van Houte
Opublikowane w: Cell, Numer 174/4, 2018, Strona(/y) 908-916.e12, ISSN 0092-8674
Wydawca: Cell Press
DOI: 10.1016/j.cell.2018.05.058

The effect of bacterial mutation rate on the evolution of CRISPR-Cas adaptive immunity

Autorzy: Anne Chevallereau, Sean Meaden, Stineke van Houte, Edze R. Westra, Clare Rollie
Opublikowane w: Philosophical Transactions of the Royal Society B: Biological Sciences, Numer 374/1772, 2019, Strona(/y) 20180094, ISSN 0962-8436
Wydawca: Royal Society of London
DOI: 10.1098/rstb.2018.0094

Variability in the durability of CRISPR-Cas immunity

Autorzy: Hélène Chabas, Antoine Nicot, Sean Meaden, Edze R. Westra, Denise M. Tremblay, Léa Pradier, Sébastien Lion, Sylvain Moineau, Sylvain Gandon
Opublikowane w: Philosophical Transactions of the Royal Society B: Biological Sciences, Numer 374/1772, 2019, Strona(/y) 20180097, ISSN 0962-8436
Wydawca: Royal Society of London
DOI: 10.1098/rstb.2018.0097

Evolutionary emergence of infectious diseases in heterogeneous host populations

Autorzy: Hélène Chabas, Sébastien Lion, Antoine Nicot, Sean Meaden, Stineke van Houte, Sylvain Moineau, Lindi M. Wahl, Edze R. Westra, Sylvain Gandon
Opublikowane w: PLOS Biology, Numer 16/9, 2018, Strona(/y) e2006738, ISSN 1545-7885
Wydawca: PLoS
DOI: 10.1371/journal.pbio.2006738

CRISPR-Cas immunity leads to a coevolutionary arms race between Streptococcus thermophilus and lytic phage

Autorzy: Jack Common, Daniel Morley, Edze R. Westra, Stineke van Houte
Opublikowane w: Philosophical Transactions of the Royal Society B: Biological Sciences, Numer 374/1772, 2019, Strona(/y) 20180098, ISSN 0962-8436
Wydawca: Royal Society of London
DOI: 10.1098/rstb.2018.0098

CRISPR-Cas antimicrobials: Challenges and future prospects

Autorzy: Elizabeth Pursey, David Sünderhauf, William H. Gaze, Edze R. Westra, Stineke van Houte
Opublikowane w: PLOS Pathogens, Numer 14/6, 2018, Strona(/y) e1006990, ISSN 1553-7374
Wydawca: PLoS
DOI: 10.1371/journal.ppat.1006990

CRISPR evolution and bacteriophage persistence in the context of population bottlenecks

Autorzy: Jack Common, Edze R. Westra
Opublikowane w: RNA Biology, Numer 16/4, 2018, Strona(/y) 588-594, ISSN 1547-6286
Wydawca: Landes Bioscience
DOI: 10.1080/15476286.2019.1578608

Recombination between phages and CRISPR−cas loci facilitates horizontal gene transfer in staphylococci

Autorzy: Andrew Varble, Sean Meaden, Rodolphe Barrangou, Edze R. Westra, Luciano A. Marraffini
Opublikowane w: Nature Microbiology, Numer 4/6, 2019, Strona(/y) 956-963, ISSN 2058-5276
Wydawca: Nature press
DOI: 10.1038/s41564-019-0400-2

Addiction systems antagonize bacterial adaptive immunity

Autorzy: Lisa van Sluijs, Stineke van Houte, John van der Oost, Stan JJ Brouns, Angus Buckling, Edze R Westra
Opublikowane w: FEMS Microbiology Letters, Numer 366/5, 2019, ISSN 1574-6968
Wydawca: Oxford academic
DOI: 10.1093/femsle/fnz047

Exploitation of the Cooperative Behaviors of Anti-CRISPR Phages

Autorzy: Anne Chevallereau, Sean Meaden, Olivier Fradet, Mariann Landsberger, Alice Maestri, Ambarish Biswas, Sylvain Gandon, Stineke van Houte, Edze R. Westra
Opublikowane w: Cell Host & Microbe, 2019, ISSN 1931-3128
Wydawca: Cell Press
DOI: 10.1016/j.chom.2019.12.004

The effect of phage genetic diversity on bacterial resistance evolution

Autorzy: Jenny M. Broniewski, Sean Meaden, Steve Paterson, Angus Buckling, Edze R. Westra
Opublikowane w: The ISME Journal, 2020, ISSN 1751-7362
Wydawca: Nature Publishing Group
DOI: 10.1038/s41396-019-0577-7

Targeting of temperate phages drives loss of type I CRISPR–Cas systems

Autorzy: Clare Rollie, Anne Chevallereau, Bridget N. J. Watson, Te-yuan Chyou, Olivier Fradet, Isobel McLeod, Peter C. Fineran, Chris M. Brown, Sylvain Gandon, Edze R. Westra
Opublikowane w: Nature, 2020, ISSN 0028-0836
Wydawca: Nature Publishing Group
DOI: 10.1038/s41586-020-1936-2

Bacterial biodiversity drives the evolution of CRISPR-based phage resistance

Autorzy: Ellinor O. Alseth, Elizabeth Pursey, Adela M. Luján, Isobel McLeod, Clare Rollie, Edze R. Westra
Opublikowane w: Nature, Numer 574/7779, 2019, Strona(/y) 549-552, ISSN 0028-0836
Wydawca: Nature Publishing Group
DOI: 10.1038/s41586-019-1662-9

It is unclear how important CRISPR-Cas systems are for protecting natural populations of bacteria against infections by mobile genetic elements

Autorzy: Edze R. Westra, Bruce R. Levin
Opublikowane w: Proceedings of the National Academy of Sciences, Numer 117/45, 2020, Strona(/y) 27777-27785, ISSN 0027-8424
Wydawca: National Academy of Sciences
DOI: 10.1073/pnas.1915966117

Evolutionary Ecology and Interplay of Prokaryotic Innate and Adaptive Immune Systems

Autorzy: Tatiana Dimitriu, Mark D. Szczelkun, Edze R. Westra
Opublikowane w: Current Biology, Numer 30/19, 2020, Strona(/y) R1189-R1202, ISSN 0960-9822
Wydawca: Cell Press
DOI: 10.1016/j.cub.2020.08.028

Avoidance of Self during CRISPR Immunization

Autorzy: Jake L. Weissman, Arlin Stoltzfus, Edze R. Westra, Philip L.F. Johnson
Opublikowane w: Trends in Microbiology, Numer 28/7, 2020, Strona(/y) 543-553, ISSN 0966-842X
Wydawca: Elsevier BV
DOI: 10.1016/j.tim.2020.02.005

The effect of Quorum sensing inhibitors on the evolution of CRISPR-based phage immunity in Pseudomonas aeruginosa

Autorzy: Jenny M. Broniewski, Matthew A. W. Chisnall, Nina Molin Høyland-Kroghsbo, Angus Buckling, Edze R. Westra
Opublikowane w: The ISME Journal, 2021, ISSN 1751-7362
Wydawca: Nature Publishing Group
DOI: 10.1038/s41396-021-00946-6

Diversity in CRISPR‐based immunity protects susceptible genotypes by restricting phage spread and evolution

Autorzy: Jack Common, David Walker‐Sünderhauf, Stineke Houte, Edze R. Westra
Opublikowane w: Journal of Evolutionary Biology, Numer 33/8, 2020, Strona(/y) 1097-1108, ISSN 1010-061X
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/jeb.13638

The ecology and evolution of microbial CRISPR-Cas adaptive immune systems

Autorzy: Edze R. Westra, Stineke van Houte, Sylvain Gandon, Rachel Whitaker
Opublikowane w: Philosophical Transactions of the Royal Society B: Biological Sciences, Numer 374/1772, 2019, Strona(/y) 20190101, ISSN 0962-8436
Wydawca: Royal Society of London
DOI: 10.1098/rstb.2019.0101

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