Rezultaty
Interim report about our progress in employing multiscale computing patterns in actual scientific applications. It will contain an assessment of the efficacy of the patterns as well as recommendations and best practices for their instantiation.
Report on Application Software ReadinessReport the specific requirements of the applications as identified during Task 3.1.
Quality Assurance PlanTo manage and support the project Quality Control, a documented Quality Assurance Plan will be set up and maintained to monitor all deliverables before finalising them. The deliverable also contains a detailed risk analysis and contingency planning.
First Dissemination ReportReview events and dissemination results of past year and proposes actions for the coming one, including update of dissemination action plan.
First progress report on the Experimental Execution EnvironmentThis deliverable will present the progress in the installation, configuration, and usage of the Experimental Execution Environment. This deliverable will also include the first version of the ComPat Experimental Execution Environment user guide.
Report on integration of ComPat services with multiscale coupling libraries and patternsA document describing the final integration of ComPat services with multiscale coupling libraries and patterns including references to ComPat applications executed on the ComPat Pan-European Experimental Execution Environment.
Report and software on design of tools and required actions to support performance tools for multiscaleReport on an analyses of the requirements for the tools (debug, profile and analyse performance) and design and architecture of a solution appropriate to support the multiscale patterns.
Architecture of the ComPat systemA document describing the overall architecture of the ComPat system including relationships between developed in the project toolkits and services.
Report on Existing Software Suitability and AdaptationReport on what software will be used in the project, how it compares to other software packages, and outline a detailed plan for their adaptation and integration, as well as report on MML implementation and status report on implementation of the multiscale computing patterns.
Final report on the Experimental Execution EnvironmentAn update of deliverable D6.3.
Final report on high level tools, including performance profiling and modellingReport on the status of the tools, and on the validation of the impact of measurement and analysis on the applications – and on the accuracy of the modelling tools as applied to simulations at the scales of machines available during the latter months of the project.
Report on the assessment of operational procedures and definition of the ComPat operational modelReport on Instantiating Computing Patterns and performance measurements and prediction of HPMC Application
Report on the performance of all selected multiscale applications as measured on the Experimental Execution Environment and other available resources. It will give a detailed account of various metrics of resource usage, including wall clock time, data throughput, scalability and energy consumption. It will furnish detailed performance predictions for all selected multiscale applications on future exascale systems. This report will, as a major outcome of this project, present a forecast of the actual impact that exascale resources may have on future science applications by leveraging extreme parallelism.
Final Report on Multiscale Computing Patterns, including their PerformanceFinal report on the performance of all selected multiscale applications as measured on the Experimental Execution Environment and selected production environments. It will give a detailed account of various metrics of resource usage, including wall clock time, data throughput, scalability and energy consumption. It will also provide a detailed account on the performance prediction models.
First Report on Multiscale Computing Patterns and AlgorithmsFirst report on the algorithms and components used to construct the Multiscale Computing Patterns, details of the actual implementation, and preliminary results on performance measurements.
First Report on status of performance profiling of multiscale simulationsFirst report on an analysis of the changes and impact on the initial simulations using the initial tools, including any architectural changes required since D4.1.
First Report on ComPat middleware servicesA document summarizing the status of development of services offering a set of key capabilities for toolkits and patterns from WP2, including QoS on computational Tier-0/1 resources, dynamic multi-cluster co-allocation of resources, energy optimization and multi-cluster deployment and execution of ComPat multiscale simulations consisting of cooperating sub-models.
Third Dissemination ReportReview events and dissemination results of second project period.
Second Dissemination ReportReview events and dissemination results and propose actions for the coming one, including update of dissemination action plan.
Detailed Dissemination Action planProject Handbook
To ensure a consistent implementation of the management of the project, UvA will produce a project procedure handbook that will be easily accessible to all Partners.
Publikacje
Autorzy:
Dakka, Jumana; Turilli, Matteo; Wright, David W; Zasada, Stefan J; Balasubramanian, Vivek; Wan, Shunzhou; Coveney, Peter V; Jha, Shantenu
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BioMed Central, Numer 1, 2018
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Springer Nature
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2018
Wydawca:
The Royal Society Publishing
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10.1098/rsta.2018.0144
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M. Vassaux, R. Richardson, P. V. Coveney
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2018
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The Royal Society Publishing
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10.1098/rsta.2018.0150
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Opublikowane w:
2018
Wydawca:
The Royal Society
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Computer Physics Communications, 2018
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Elsevier
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S. Alowayyed, V. Azizi, G. Zavodszky and A. G. Hoekstra
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Computer Physics Communications, 2018
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Elsevier
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V. Jancauskas, T. Piontek, P. Kopta, B. Bosak
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Philosophical Transactions of the Royal Society, 2018
Wydawca:
The Royal Society
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D. Groen
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ICCS 2018, Springer Lecture Notes in Computer Science (LNCS), 2018
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N. T. Chan, D. Suleimenova, D. Bell, D. Groen
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Proceedings of the Operational Research Society Simulation Workshop 2018, 2018
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Phil Trans R Soc (Series A), 2018
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The Royal Society
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10.1098/rsta.2018.0145
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S. J. Zasada and P. V. Coveney
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CoRR, 2015
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D. Groen, J. Knap, P. Neumann, D. Suleimenova, L. Veen, K. Leiter
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American Chemical Society
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Frontiers in Immunology, Numer 8, 2017, ISSN 1664-3224
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Frontiers in Physiology, Numer 8, 2017, Strona(/y) 563, ISSN 1664-042X
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Frontiers Research Foundation
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Frontiers in Physiology, Numer 9, 2018, ISSN 1664-042X
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Journal of Computational Science, Numer 24, 2018, Strona(/y) 1-7, ISSN 1877-7503
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Monthly Notices of the Royal Astronomical Society, Numer 480/3, 2018, Strona(/y) 3800-3811, ISSN 0035-8711
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Journal of Computational Science, Numer 22, 2017, Strona(/y) 15-25, ISSN 1877-7503
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Advanced Materials, Numer 30/13, 2018, Strona(/y) 1705791, ISSN 0935-9648
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Geoscientific Model Development, Numer 10/8, 2017, Strona(/y) 3167-3187, ISSN 1991-9603
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Monthly Notices of the Royal Astronomical Society, Numer 474/4, 2017, Strona(/y) 5114-5121, ISSN 0035-8711
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Geoscientific Model Development Discussions, 2016, Strona(/y) 1-36, ISSN 1991-962X
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Procedia Computer Science, Numer 108, 2017, Strona(/y) 159-165, ISSN 1877-0509
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Physical Chemistry Chemical Physics, Numer 18/44, 2016, Strona(/y) 30236-30240, ISSN 1463-9076
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Opublikowane w:
Cardiovascular Engineering and Technology, 2018, ISSN 1869-408X
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Multiscale and Multidisciplinary Modeling, Experiments and Design, Numer 1/1, 2018, Strona(/y) 57-68, ISSN 2520-8160
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Opublikowane w:
Future Generation Computer Systems, Numer 91, 2019, Strona(/y) 335-346, ISSN 0167-739X
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Journal of Chemical Theory and Computation, Numer 13/2, 2017, Strona(/y) 784-795, ISSN 1549-9618
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American Chemical Society
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